Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.2e-68 263.1 133 100.0
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 9.7e-47 190.3 122 82.0
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 2.2e-46 189.1 119 80.7
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 3.7e-46 188.3 122 80.3
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 3.7e-46 188.3 122 80.3
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 4.8e-46 188.0 119 79.8
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 6.3e-46 187.6 120 81.7
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 5.3e-45 184.5 127 73.2
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 2.6e-44 182.2 119 76.5
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 3.5e-44 181.8 121 79.3
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 4.5e-44 181.4 126 77.8
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 7.7e-44 180.6 116 81.9
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 1.7e-43 179.5 132 74.2
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 5.0e-43 177.9 119 78.2
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 3.2e-42 175.3 131 73.3
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 3.2e-42 175.3 123 73.2
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 4.2e-42 174.9 120 74.2
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 5.5e-42 174.5 129 72.1
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 9.4e-42 173.7 120 75.0
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 1.8e-40 169.5 116 69.8
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 2.3e-40 169.1 122 70.5
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.3e-40 169.1 126 72.2
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 3.0e-40 168.7 127 68.5
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 3.0e-40 168.7 115 76.5
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 3.9e-40 168.3 116 69.8
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 5.2e-40 167.9 120 72.5
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 1.5e-39 166.4 116 69.0
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 2.6e-39 165.6 128 68.0
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 2.6e-39 165.6 122 72.1
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 3.3e-39 165.2 128 68.8
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 3.3e-39 165.2 128 71.1
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 5.7e-39 164.5 116 70.7
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 5.7e-39 164.5 133 66.2
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 5.7e-39 164.5 132 65.2
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 7.4e-39 164.1 125 69.6
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 7.4e-39 164.1 126 69.8
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 9.7e-39 163.7 126 69.8
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.3e-38 163.3 135 66.7
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.3e-38 163.3 135 66.7
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 1.7e-38 162.9 132 65.2
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 2.2e-38 162.5 128 66.4
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 2.8e-38 162.2 121 71.1
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 2.8e-38 162.2 137 65.7
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 2.8e-38 162.2 130 66.2
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 3.7e-38 161.8 139 64.7
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 6.3e-38 161.0 115 69.6
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.3e-38 161.0 139 66.2
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 6.3e-38 161.0 117 69.2
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 6.3e-38 161.0 124 66.1
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 8.2e-38 160.6 132 66.7
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 1.4e-37 159.8 117 69.2
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 1.4e-37 159.8 123 69.9
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 1.4e-37 159.8 126 69.0
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 2.4e-37 159.1 126 66.7
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.4e-37 159.1 141 63.8
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 2.4e-37 159.1 122 68.9
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 2.4e-37 159.1 122 71.3
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 2.4e-37 159.1 124 65.3
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 3.1e-37 158.7 139 67.6
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 3.1e-37 158.7 123 69.9
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 3.1e-37 158.7 125 67.2
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 4.1e-37 158.3 128 68.0
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 5.3e-37 157.9 120 66.7
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 5.3e-37 157.9 132 69.7
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 7.0e-37 157.5 121 71.9
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 9.1e-37 157.1 124 64.5
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 1.6e-36 156.4 124 64.5
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 3.5e-36 155.2 119 67.2
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 5.9e-36 154.5 129 65.9
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 1.0e-35 153.7 123 68.3
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 1.0e-35 153.7 119 66.4
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 1.0e-35 153.7 124 63.7
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 1.3e-35 153.3 120 66.7
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.7e-35 152.9 116 65.5
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 1.7e-35 152.9 124 66.9
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.2e-35 152.5 151 59.6
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 2.9e-35 152.1 129 62.8
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 2.9e-35 152.1 128 62.5
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 3.8e-35 151.8 125 65.6
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 6.5e-35 151.0 124 66.1
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 1.9e-34 149.4 129 65.1
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.5e-34 149.1 166 56.0
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 5.5e-34 147.9 126 62.7
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 5.5e-34 147.9 128 61.7
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 9.4e-34 147.1 119 68.1
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 9.4e-34 147.1 119 68.1
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.6e-33 146.4 116 66.4
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.6e-33 146.4 116 66.4
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 2.1e-33 146.0 143 58.7
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 2.7e-33 145.6 117 65.0
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 2.7e-33 145.6 117 65.0
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 2.7e-33 145.6 117 65.0
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 6.1e-33 144.4 124 58.9
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 8.0e-33 144.1 113 68.1
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 1.0e-32 143.7 117 64.1
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.4e-32 143.3 119 66.4
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 8.8e-32 140.6 117 64.1
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 8.8e-32 140.6 165 52.1
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 1.2e-31 140.2 117 64.1
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 1.2e-31 140.2 117 68.4
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 2.0e-31 139.4 129 60.5
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 2.0e-31 139.4 134 59.7
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 2.6e-31 139.0 127 61.4
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 2.6e-31 139.0 121 61.2
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 3.4e-31 138.7 116 64.7
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 3.4e-31 138.7 116 64.7
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 3.4e-31 138.7 119 66.4
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 4.4e-31 138.3 117 60.7
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 5.7e-31 137.9 115 65.2
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 5.7e-31 137.9 117 61.5
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 5.7e-31 137.9 129 60.5
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 2.2e-30 136.0 109 68.8
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 4.8e-30 134.8 139 56.1
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 4.8e-30 134.8 130 59.2
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 8.3e-30 134.0 119 63.0
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 1.1e-29 133.7 124 59.7
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.7e-27 126.3 121 58.7
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.7e-27 126.3 121 58.7
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 2.9e-27 125.6 110 61.8
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 6.5e-27 124.4 119 56.3
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.5e-26 123.2 120 56.7
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 1.5e-26 123.2 126 53.2
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 3.2e-26 122.1 104 64.4
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 4.2e-26 121.7 124 55.6
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 3.6e-25 118.6 115 58.3
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 7.7e-20 100.9 110 54.5
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 1.7e-19 99.8 75 69.3
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 2.3e-19 99.4 116 48.3
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 9.5e-18 94.0 127 47.2
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 1.8e-16 89.7 122 44.3
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 8.9e-16 87.4 62 72.6
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.3e-14 83.6 115 45.2
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 4.1e-13 78.6 145 41.4
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 2.7e-12 75.9 87 56.3
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 2.7e-12 75.9 87 56.3
Sabra12G0063200 Salix brachista HOM05D004891 ORTHO05D005997 3.3e-10 68.9 87 55.2
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 2.8e-09 65.9 100 40.0
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 5.2e-08 61.6 117 39.3
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 6.8e-08 61.2 123 37.4
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.6e-07 59.3 115 35.7
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 3.4e-07 58.9 123 34.1
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 9.8e-07 57.4 129 35.7
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 8.3e-06 54.3 114 36.0
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 8.3e-06 54.3 116 35.3


User provided reference genes

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