Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2664 Acer truncatum HOM05D000017 ORTHO05D000013 6.8e-47 190.3 93 100.0
Atru.chr2.1485 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-29 131.7 95 66.3
Atru.chr1.2149 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-27 124.4 95 63.2
Atru.chr10.566 Acer truncatum HOM05D000017 ORTHO05D000013 4.3e-25 117.9 95 55.8
Atru.chr4.646 Acer truncatum HOM05D000017 ORTHO05D000013 9.9e-22 106.7 95 50.5
Atru.chr13.2473 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-20 102.4 95 51.6
Atru.chr3.3251 Acer truncatum HOM05D000238 ORTHO05D001156 2.7e-19 98.6 89 50.6
Atru.chr1.1848 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-18 94.4 95 48.4
Atru.chr11.936 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-18 94.0 95 49.5
Atru.chr6.454 Acer truncatum HOM05D000017 ORTHO05D000013 8.6e-18 93.6 95 49.5
Atru.chr7.748 Acer truncatum HOM05D000017 ORTHO05D000013 4.2e-12 74.7 95 36.8
Atru.chr3.730 Acer truncatum HOM05D000017 ORTHO05D000013 7.8e-11 70.5 95 37.9
Atru.chr10.1873 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-10 69.7 95 36.8
Atru.chr11.1920 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-10 69.7 95 38.9
Atru.chr3.2457 Acer truncatum HOM05D000017 ORTHO05D000013 3.0e-10 68.6 95 37.9
Atru.chr1.2453 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-10 67.4 47 63.8
Ciclev10023995m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.6e-10 67.4 96 33.3
Nitab4.5_0000419g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.3e-09 64.7 95 33.7
Atru.chr6.1096 Acer truncatum HOM05D000017 ORTHO05D000013 5.6e-09 64.3 94 37.2
Atru.chr10.215 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-08 62.8 95 34.7
TWI23G0845 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-08 62.0 95 32.6
TWI59G1465 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-08 61.2 95 32.6
TWI79G1677 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-08 61.2 95 32.6
CSS0018151 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.1e-08 60.5 94 34.0
Atru.chr8.42 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-07 60.1 69 40.6
PGR004G0303 Punica granatum HOM05D000017 ORTHO05D000013 1.1e-07 60.1 94 33.0
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-07 60.1 94 37.2
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.8e-07 59.3 95 33.7
Atru.chr7.860 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-07 58.9 69 42.0
EL10Ac7g17726 Beta vulgaris HOM05D000017 ORTHO05D000013 2.4e-07 58.9 94 37.2
COL.COLO4_10434 Corchorus olitorius HOM05D000017 ORTHO05D000013 3.1e-07 58.5 92 32.6
PGR044G1328 Punica granatum HOM05D000017 ORTHO05D000013 3.1e-07 58.5 94 33.0
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-07 58.5 94 36.2
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.0e-07 58.2 94 33.0
THA.LOC104815408 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.0e-07 58.2 94 36.2
TWI59G0444 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.0e-07 58.2 95 32.6
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.3e-07 57.8 94 34.0
TWI09G0785 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.3e-07 57.8 95 29.5
Ciclev10006748m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.9e-07 57.4 96 30.2
THA.LOC104818597 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.9e-07 57.4 95 35.8
COL.COLO4_26563 Corchorus olitorius HOM05D000017 ORTHO05D000013 9.0e-07 57.0 92 32.6
TWI63G0149 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.0e-07 57.0 95 31.6
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 56.6 94 29.8
TWI79G0048 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 56.6 95 29.5
TWI59G0994 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-06 56.2 95 30.5
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 55.8 94 29.8
CSS0005205 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 55.5 91 31.9
THA.LOC104803431 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.4e-06 54.7 94 33.0
THA.LOC104806000 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.4e-06 54.7 94 33.0
THA.LOC104824602 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.4e-06 54.7 94 33.0
Atru.chr13.2015 Acer truncatum HOM05D000017 ORTHO05D000013 5.8e-06 54.3 70 38.6
COL.COLO4_20765 Corchorus olitorius HOM05D000017 ORTHO05D000013 5.8e-06 54.3 92 32.6
THA.LOC104811292 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.8e-06 54.3 94 33.0
THA.LOC109116229 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.8e-06 54.3 94 33.0
TWI75G0721 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.8e-06 54.3 95 28.4
ECA232G2152 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.6e-06 53.9 94 31.9
TWI81G0891 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.6e-06 53.9 96 32.3


User provided reference genes

Program Settings