Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2663 Acer truncatum HOM05D000017 ORTHO05D000013 8.2e-51 203.4 99 100.0
Atru.chr5.2370 Acer truncatum HOM05D000017 ORTHO05D000013 7.5e-44 180.3 98 86.7
Atru.chr1.2149 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-30 136.0 96 61.5
Atru.chr3.3251 Acer truncatum HOM05D000238 ORTHO05D001156 5.2e-29 131.0 98 59.2
Atru.chr3.1705 Acer truncatum HOM05D000017 ORTHO05D000013 5.0e-24 114.4 97 50.5
Atru.chr10.566 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-24 114.0 91 59.3
Atru.chr12.1625 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-23 112.8 94 54.3
Atru.chr13.2473 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-23 112.8 97 51.5
Atru.chr1.2453 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-20 102.4 97 46.4
Atru.chr8.14 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-20 102.4 96 52.1
Atru.chr8.44 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-19 97.4 97 44.3
Atru.chr6.319 Acer truncatum HOM05D000017 ORTHO05D000013 4.4e-12 74.7 59 55.9
Atru.chr6.1342 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-11 73.2 98 32.7
Atru.chr3.1166 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-11 72.8 98 33.7
Atru.chr10.1873 Acer truncatum HOM05D000017 ORTHO05D000013 2.2e-11 72.4 93 31.2
Atru.chr11.1920 Acer truncatum HOM05D000017 ORTHO05D000013 2.2e-11 72.4 93 31.2
Atru.chr3.2456 Acer truncatum HOM05D000017 ORTHO05D000013 2.2e-11 72.4 93 31.2
Atru.chr7.747 Acer truncatum HOM05D000017 ORTHO05D000013 3.2e-10 68.6 94 30.9
Atru.chr1.282 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-10 67.4 91 27.5
Atru.chr3.730 Acer truncatum HOM05D000017 ORTHO05D000013 9.2e-10 67.0 93 31.2
Atru.chr5.2680 Acer truncatum HOM05D000017 ORTHO05D000013 9.2e-10 67.0 93 31.2
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-09 65.9 89 32.6
Atru.chr1.2886 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-08 63.2 93 29.0
Ciclev10023995m.g Citrus clementina HOM05D000017 ORTHO05D000013 1.7e-08 62.8 91 31.9
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 3.0e-08 62.0 93 30.1
TWI56G0654 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.0e-08 62.0 90 26.7
Atru.chr11.1153 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-08 61.6 93 29.0
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.6e-08 60.8 88 29.5
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.6e-08 60.8 88 29.5
ECA233G5504 Erigeron canadensis HOM05D000017 ORTHO05D004107 1.5e-07 59.7 90 31.1
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 59.7 88 28.4
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 59.7 88 28.4
ECA236G1943 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.9e-07 59.3 85 34.1
ECA248G3195 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.5e-07 58.9 85 34.1
ECA238G2722 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.3e-07 58.5 85 34.1
TPR.G12444 Trifolium pratense HOM05D000017 ORTHO05D000013 3.3e-07 58.5 79 30.4
Dinv17963 Davidia involucrata HOM05D008850 ORTHO05D004107 4.3e-07 58.2 88 26.1
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.3e-07 58.2 93 25.8
Rhsim01G0131900 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.3e-07 58.2 98 28.6
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.6e-07 57.8 88 30.7
ECA233G1786 Erigeron canadensis HOM05D000017 ORTHO05D004107 7.3e-07 57.4 90 30.0
Atru.chr7.859 Acer truncatum HOM05D000017 ORTHO05D000013 9.5e-07 57.0 46 50.0
Ca_26364_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.2e-06 56.6 88 29.5
Hma1.2p1_0175F.1_g077075 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 56.6 88 25.0
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 56.6 88 25.0
Hma1.2p1_1218F.1_g267670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 56.6 88 25.0
TPR.G31072 Trifolium pratense HOM05D000017 ORTHO05D000013 1.2e-06 56.6 89 28.1
Ca_20518_v3 Cicer arietinum L. HOM05D008026 ORTHO05D010612 1.6e-06 56.2 88 28.4
Rhsim07G0255600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.6e-06 56.2 88 29.5
Ca_12153_v3 Cicer arietinum L. HOM05D000017 ORTHO05D010612 2.1e-06 55.8 88 29.5
TPR.G35629 Trifolium pratense HOM05D000017 ORTHO05D000013 2.1e-06 55.8 81 33.3
Atru.chr1.2371 Acer truncatum HOM05D000017 ORTHO05D000013 3.6e-06 55.1 90 24.4
Atru.chr6.1008 Acer truncatum HOM05D000017 ORTHO05D000013 3.6e-06 55.1 90 31.1
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-06 55.1 98 26.5
Rhsim05G0162200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.7e-06 54.7 88 27.3
TWI15G0100 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.2e-06 54.3 88 28.4
TWI15G0892 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.2e-06 54.3 88 28.4
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.1e-06 53.9 91 27.5


User provided reference genes

Program Settings