Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.2e-69 266.5 147 100.0
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.4e-46 189.9 142 64.1
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 4.1e-46 188.3 144 66.0
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 2.6e-45 185.7 147 61.9
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 9.4e-43 177.2 144 63.2
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 3.6e-42 175.3 146 61.6
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 4.7e-42 174.9 146 61.6
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.4e-41 173.3 146 61.0
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 3.9e-41 171.8 148 60.8
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.6e-40 169.1 151 56.3
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.7e-39 166.4 158 55.1
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 4.8e-39 164.9 145 60.7
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 7.0e-38 161.0 144 59.0
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 7.0e-38 161.0 145 57.9
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.0e-37 159.5 152 53.3
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 3.5e-37 158.7 142 57.7
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 3.5e-37 158.7 145 57.2
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.0e-36 157.1 144 56.2
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 1.7e-36 156.4 149 54.4
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.7e-36 156.4 149 55.0
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 2.2e-36 156.0 142 55.6
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.2e-36 156.0 148 55.4
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 8.5e-36 154.1 120 62.5
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 1.1e-35 153.7 148 55.4
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.9e-35 152.9 120 62.5
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 4.2e-35 151.8 146 56.2
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 4.2e-35 151.8 139 54.0
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 5.5e-35 151.4 150 54.7
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 5.5e-35 151.4 145 56.6
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 7.2e-35 151.0 150 54.7
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 1.6e-34 149.8 138 55.1
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.6e-34 149.8 138 55.1
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.6e-34 149.8 138 55.1
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.1e-34 149.4 136 55.1
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.7e-34 149.1 143 52.4
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 3.6e-34 148.7 139 52.5
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 3.6e-34 148.7 149 52.3
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 8.0e-34 147.5 139 51.8
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 1.0e-33 147.1 139 53.2
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 1.0e-33 147.1 139 53.2
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 1.4e-33 146.7 150 53.3
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 3.0e-33 145.6 117 59.8
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 4.0e-33 145.2 150 54.0
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 4.0e-33 145.2 134 56.0
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 6.7e-33 144.4 102 68.6
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 6.7e-33 144.4 138 53.6
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 8.8e-33 144.1 138 52.2
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.2e-32 143.7 117 59.8
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 2.6e-32 142.5 141 53.2
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 3.3e-32 142.1 76 90.8
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.3e-32 142.1 117 59.0
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 3.3e-32 142.1 114 58.8
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.2e-31 139.4 114 57.0
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.8e-31 139.0 147 46.3
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 3.7e-31 138.7 116 55.2
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 4.8e-31 138.3 117 58.1
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.1e-30 137.1 141 46.8
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 4.1e-30 135.2 114 53.5
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.1e-30 135.2 128 54.7
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 5.3e-30 134.8 152 44.1
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 7.0e-30 134.4 136 53.7
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 7.0e-30 134.4 117 54.7
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 3.5e-29 132.1 117 54.7
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 7.7e-29 131.0 144 47.9
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.3e-28 130.2 138 52.2
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.7e-28 129.8 118 50.8
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 1.7e-28 129.8 109 57.8
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 8.5e-28 127.5 149 49.0
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.1e-27 127.1 152 40.8
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.2e-26 123.6 121 53.7
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 2.1e-26 122.9 100 60.0
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.1e-26 122.9 112 52.7
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 8.0e-26 120.9 118 51.7
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.4e-25 120.2 143 51.0
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 4.0e-25 118.6 125 48.8
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 3.4e-24 115.5 123 49.6
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 1.3e-23 113.6 120 50.0
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.3e-23 113.6 120 49.2
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.7e-23 113.2 120 50.0
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.2e-23 112.8 125 44.0
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.2e-23 112.8 125 44.0
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 6.3e-23 111.3 100 51.0
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.4e-22 109.4 119 49.6
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 3.1e-22 109.0 106 54.7
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 5.4e-22 108.2 117 49.6
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 5.4e-22 108.2 113 46.9
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 7.0e-22 107.8 95 60.0
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.2e-21 107.1 123 50.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 4.2e-19 98.6 117 45.3
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.2e-18 97.1 92 50.0
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 3.6e-18 95.5 87 49.4
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 4.7e-18 95.1 114 41.2
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 2.3e-17 92.8 103 44.7
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.3e-17 92.8 124 39.5
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.0e-17 92.4 124 39.5
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 4.0e-17 92.0 119 42.9
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.5e-16 90.1 123 40.7
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 2.6e-16 89.4 74 59.5
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 3.4e-16 89.0 100 49.0
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 4.4e-16 88.6 122 37.7
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 3.7e-15 85.5 125 36.0
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 5.9e-13 78.2 135 33.3
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 1.7e-12 76.6 120 34.2
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 2.8e-10 69.3 116 32.8
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 3.6e-10 68.9 87 36.8
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.0e-08 63.2 62 40.3
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 2.0e-08 63.2 105 34.3
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.6e-08 62.8 60 41.7
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 3.2e-06 55.8 106 33.0


User provided reference genes

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