Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2490 Acer truncatum HOM05D000045 ORTHO05D009940 8.5e-57 223.4 109 100.0
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 7.8e-18 94.0 112 49.1
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 2.1e-15 85.9 108 45.4
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 2.6e-13 79.0 108 43.5
Hma1.2p1_0531F.1_g173385 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 6.4e-12 74.3 114 33.3
Hma1.2p1_0531F.1_g173390 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 6.4e-12 74.3 114 33.3
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.2e-11 70.5 116 35.3
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-10 69.7 113 38.9
FvH4_4g07801 Fragaria vesca HOM05D000045 ORTHO05D000067 2.0e-10 69.3 116 35.3
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-10 68.9 113 38.1
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 2.7e-10 68.9 113 31.9
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 2.7e-10 68.9 113 38.9
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.7e-10 68.9 104 41.3
TWI56G1316 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.5e-10 68.6 104 38.5
FvH4_3g17011 Fragaria vesca HOM05D000045 ORTHO05D009940 7.8e-10 67.4 116 36.2
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 1.0e-09 67.0 110 31.8
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 1.0e-09 67.0 118 39.8
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.7e-09 66.2 111 34.2
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 6.6e-09 64.3 107 33.6
TPR.G11036 Trifolium pratense HOM05D000045 ORTHO05D009940 6.6e-09 64.3 107 37.4
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.1e-08 63.5 109 35.8
Psat5g030640 Pisum sativum HOM05D000045 ORTHO05D009940 1.1e-08 63.5 110 38.2
TPR.G26725 Trifolium pratense HOM05D000045 ORTHO05D000067 1.1e-08 63.5 109 34.9
TWI59G0983 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-08 63.5 104 37.5
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-08 63.2 58 51.7
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-08 63.2 58 51.7
SGA_v2.0_scaffold56G20041 Striga asiatica HOM05D000045 ORTHO05D009940 2.5e-08 62.4 107 35.5
SGA_v2.0_scaffold515G52659 Striga asiatica HOM05D000045 ORTHO05D009940 4.3e-08 61.6 107 33.6
Psat7g141800 Pisum sativum HOM05D000045 ORTHO05D009940 5.6e-08 61.2 110 36.4
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.5e-08 60.5 114 35.1
MD05G1027500 Malus domestica HOM05D000045 ORTHO05D009940 9.5e-08 60.5 111 35.1
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-07 60.1 104 34.6
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-07 59.7 104 34.6
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-07 59.7 104 34.6
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-07 59.3 114 34.2
ECA240G3213 Erigeron canadensis HOM05D015542 ORTHO05D009940 2.8e-07 58.9 103 31.1
Psat1g175200 Pisum sativum HOM05D000045 ORTHO05D009940 2.8e-07 58.9 110 36.4
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.8e-07 58.9 112 33.9
PSO017G5661 Papaver somniferum HOM05D000045 ORTHO05D000067 3.6e-07 58.5 62 45.2
PSO210G5073 Papaver somniferum HOM05D000045 ORTHO05D009940 3.6e-07 58.5 105 32.4
SGA_v2.0_scaffold126G33925 Striga asiatica HOM05D000045 ORTHO05D009940 3.6e-07 58.5 107 34.6
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 3.6e-07 58.5 115 29.6
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.7e-07 58.2 56 42.9
Psat0s1608g0040 Pisum sativum HOM05D000045 ORTHO05D009940 4.7e-07 58.2 110 34.5
vmacro20975 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 4.7e-07 58.2 102 36.3
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.0e-07 57.4 104 31.7
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.1e-06 57.0 105 32.4
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.1e-06 57.0 105 32.4
Psat4g094040 Pisum sativum HOM05D000045 ORTHO05D009940 1.4e-06 56.6 110 35.5
Atru.chr7.967 Acer truncatum HOM05D000045 ORTHO05D000067 1.8e-06 56.2 108 36.1
ECA232G1086 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.8e-06 56.2 112 34.8
Psat4g115040 Pisum sativum HOM05D000045 ORTHO05D009940 1.8e-06 56.2 110 35.5
Atru.chr1.1265 Acer truncatum HOM05D000045 ORTHO05D009940 3.1e-06 55.5 37 59.5
Glyma.08G172600 Glycine max HOM05D000045 ORTHO05D000067 3.1e-06 55.5 73 38.4
PSO675G7638 Papaver somniferum HOM05D000045 ORTHO05D009940 3.1e-06 55.5 106 32.1
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.1e-06 55.5 106 34.0
TWI60G0659 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.1e-06 55.5 72 36.1
PSO063G1228 Papaver somniferum HOM05D000045 ORTHO05D000067 4.0e-06 55.1 62 38.7
TPR.G28629 Trifolium pratense HOM05D000045 ORTHO05D000067 5.2e-06 54.7 107 31.8
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 6.8e-06 54.3 106 32.1
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 6.8e-06 54.3 106 31.1
TWI09G0748 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 8.9e-06 53.9 67 38.8
TWI77G0218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.9e-06 53.9 105 33.3


User provided reference genes

Program Settings