Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 5.5e-99 364.4 194 100.0
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.9e-43 179.9 203 54.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 6.2e-42 174.9 200 54.5
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 5.2e-41 171.8 108 83.3
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 5.2e-41 171.8 184 56.5
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 6.8e-41 171.4 198 53.5
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 8.9e-41 171.0 200 49.5
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.2e-40 170.6 190 54.2
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.0e-40 169.9 198 49.0
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 7.5e-40 167.9 199 54.8
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.3e-39 167.2 158 58.9
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.7e-39 166.8 198 49.0
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.9e-39 166.0 174 56.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 3.7e-39 165.6 192 53.6
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 3.7e-39 165.6 159 57.2
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 3.7e-39 165.6 190 55.3
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 6.4e-39 164.9 199 53.8
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.1e-38 164.1 131 65.6
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.1e-38 164.1 198 47.5
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.4e-38 163.7 199 49.7
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.9e-38 163.3 108 75.9
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 2.4e-38 162.9 194 50.0
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.2e-38 162.5 131 65.6
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 3.2e-38 162.5 163 54.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 7.0e-38 161.4 125 68.8
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.0e-38 161.4 175 50.9
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 9.2e-38 161.0 201 51.2
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.2e-37 160.6 183 53.0
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.2e-37 160.6 122 70.5
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.6e-37 160.2 108 75.0
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.6e-37 160.2 171 56.1
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.0e-37 159.8 132 65.9
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-37 159.8 200 51.0
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-37 159.8 200 51.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 6.0e-37 158.3 186 49.5
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.0e-36 157.5 127 62.2
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.0e-36 157.5 159 56.6
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 1.3e-36 157.1 200 47.0
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.3e-36 157.1 173 53.8
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.7e-36 156.8 123 63.4
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.0e-36 156.0 201 52.7
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 5.0e-36 155.2 106 73.6
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 5.0e-36 155.2 108 73.1
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 5.0e-36 155.2 163 52.8
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 6.6e-36 154.8 108 66.7
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 8.6e-36 154.5 202 48.5
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 8.6e-36 154.5 163 52.1
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.1e-35 154.1 129 64.3
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.9e-35 153.3 125 63.2
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.9e-35 153.3 101 75.2
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 3.3e-35 152.5 108 66.7
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 4.3e-35 152.1 116 66.4
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 4.3e-35 152.1 196 46.4
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 5.6e-35 151.8 106 69.8
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 7.3e-35 151.4 185 47.6
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 9.5e-35 151.0 108 68.5
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.2e-34 150.6 107 65.4
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.2e-34 150.6 198 50.5
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.2e-34 150.6 108 67.6
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 2.8e-34 149.4 189 49.2
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.8e-34 149.4 193 47.7
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 3.6e-34 149.1 108 68.5
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 6.2e-34 148.3 188 45.7
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 8.1e-34 147.9 122 59.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.1e-33 147.5 108 66.7
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.1e-33 147.5 108 63.9
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.1e-33 147.5 188 45.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 2.3e-33 146.4 106 69.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.1e-33 146.0 108 63.0
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 4.0e-33 145.6 106 69.8
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 6.8e-33 144.8 204 44.1
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 8.9e-33 144.4 176 48.3
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.2e-32 144.1 175 49.7
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.2e-32 144.1 175 49.7
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.2e-32 144.1 175 49.1
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.2e-32 144.1 175 49.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.2e-32 144.1 179 47.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.2e-32 144.1 108 62.0
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.6e-32 142.9 196 45.4
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 5.8e-32 141.7 108 63.0
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.3e-31 140.6 112 67.0
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.4e-30 137.1 98 68.4
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 4.1e-30 135.6 95 67.4
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 9.2e-30 134.4 110 64.5
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.6e-29 133.7 95 69.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.7e-29 132.9 105 58.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 6.0e-29 131.7 188 47.3
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.9e-28 129.0 99 64.6
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 2.5e-27 126.3 94 66.0
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.6e-26 123.6 93 69.9
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 8.9e-25 117.9 83 66.3
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 3.4e-24 115.9 105 52.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 3.4e-24 115.9 105 54.3
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 4.4e-24 115.5 83 71.1
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 8.4e-23 111.3 72 72.2
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.1e-22 109.0 146 44.5
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.0e-20 104.4 86 60.5
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 5.1e-20 102.1 127 49.6
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 6.6e-20 101.7 91 57.1
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 1.9e-19 100.1 84 47.6
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 1.2e-18 97.4 75 61.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 6.2e-18 95.1 112 41.1
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.3e-15 87.4 62 64.5
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-14 81.3 90 42.2
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.8e-08 62.0 44 65.9
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.8e-07 59.3 92 43.5
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 1.9e-06 57.0 99 38.4


User provided reference genes

Program Settings