Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.199 Acer truncatum HOM05D000439 ORTHO05D006172 1.5e-139 499.6 263 100.0
Atru.chr9.1215 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-42 177.2 156 64.7
Atru.chr4.2461 Acer truncatum HOM05D000439 ORTHO05D006172 3.9e-23 112.8 58 96.6
Haze_00899 Corylus avellana HOM05D000439 ORTHO05D006172 9.6e-22 108.2 60 88.3
Cfa015646 Carpinus fangiana HOM05D000439 ORTHO05D006172 2.8e-21 106.7 60 86.7
Gorai.005G042900 Gossypium raimondii HOM05D000439 ORTHO05D006172 4.8e-21 105.9 60 85.0
MD16G1194000 Malus domestica HOM05D000439 ORTHO05D006172 6.2e-21 105.5 58 89.7
COL.COLO4_21479 Corchorus olitorius HOM05D000439 ORTHO05D006172 8.1e-21 105.1 60 85.0
CiPaw.01G166100 Carya illinoinensis HOM05D000439 ORTHO05D006172 1.1e-20 104.8 60 85.0
Prupe.1G013700 Prunus persica HOM05D000439 ORTHO05D006172 1.1e-20 104.8 58 87.9
Gohir.D02G038900 Gossypium hirsutum HOM05D000439 ORTHO05D006172 1.8e-20 104.0 60 83.3
PGR004G1056 Punica granatum HOM05D000439 ORTHO05D006172 1.8e-20 104.0 58 87.9
QL06p002460 Quercus lobata HOM05D000439 ORTHO05D006172 2.4e-20 103.6 60 83.3
Sabra08G0116600 Salix brachista HOM05D000439 ORTHO05D006172 2.4e-20 103.6 60 83.3
MD13G1193100 Malus domestica HOM05D000439 ORTHO05D006172 4.0e-20 102.8 58 87.9
Sc25g0004360 Simmondsia chinensis HOM05D000439 ORTHO05D006172 4.0e-20 102.8 60 83.3
Ciclev10004753m.g Citrus clementina HOM05D000439 ORTHO05D006172 5.3e-20 102.4 58 86.2
Duzib052G0960 Durio zibethinus HOM05D000439 ORTHO05D006172 5.3e-20 102.4 60 81.7
THA.LOC104803025 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 5.3e-20 102.4 60 81.7
Cpa.g.sc58.106 Carica papaya HOM05D000439 ORTHO05D006172 9.0e-20 101.7 58 86.2
Phvul.007G057500 Phaseolus vulgaris HOM05D000439 ORTHO05D006172 9.0e-20 101.7 58 84.5
Rhsim04G0202100 Rhododendron simsii HOM05D000439 ORTHO05D006172 9.0e-20 101.7 60 81.7
Thecc.04G232100 Theobroma cacao HOM05D000439 ORTHO05D006172 9.0e-20 101.7 60 80.0
VMungo0720G0964 Vigna mungo HOM05D000439 ORTHO05D006172 9.0e-20 101.7 58 84.5
EL10As3g23288 Beta vulgaris HOM05D000439 ORTHO05D006172 1.2e-19 101.3 58 84.5
Glyma.10G248000 Glycine max HOM05D000439 ORTHO05D006172 1.2e-19 101.3 58 84.5
Glyma.20G146100 Glycine max HOM05D000439 ORTHO05D006172 1.2e-19 101.3 58 84.5
Medtr1g103710 Medicago truncatula HOM05D000439 ORTHO05D006172 1.2e-19 101.3 59 81.4
Potri.008G153000 Populus trichocarpa HOM05D000439 ORTHO05D006172 1.2e-19 101.3 58 84.5
Eucgr.H03480 Eucalyptus grandis HOM05D000439 ORTHO05D006172 1.5e-19 100.9 69 73.9
Gorai.006G239300 Gossypium raimondii HOM05D000439 ORTHO05D006172 2.0e-19 100.5 60 78.3
Gohir.A09G215900 Gossypium hirsutum HOM05D000439 ORTHO05D006172 2.6e-19 100.1 60 78.3
Gohir.D09G218300 Gossypium hirsutum HOM05D000439 ORTHO05D006172 2.6e-19 100.1 60 78.3
Peaxi162Scf00092g01013 Petunia axillaris HOM05D000439 ORTHO05D006172 2.6e-19 100.1 58 82.8
Psat6g207360 Pisum sativum HOM05D000439 ORTHO05D006172 2.6e-19 100.1 58 82.8
Manes.15G029200 Manihot esculenta HOM05D000439 ORTHO05D006172 3.4e-19 99.8 58 87.9
arahy.Tifrunner.gnm1.ann1.JR532J Arachis hypogaea HOM05D000439 ORTHO05D006172 4.5e-19 99.4 58 81.0
arahy.Tifrunner.gnm1.ann1.Y59G7X Arachis hypogaea HOM05D000439 ORTHO05D006172 4.5e-19 99.4 58 81.0
CANSAT78G0526 Cannabis sativa HOM05D000439 ORTHO05D006172 4.5e-19 99.4 58 82.8
AUR62034747 Chenopodium quinoa HOM05D000439 ORTHO05D006172 4.5e-19 99.4 60 78.3
ClCG06G006240 Citrullus lanatus HOM05D000439 ORTHO05D006172 4.5e-19 99.4 58 82.8
Dinv13996 Davidia involucrata HOM05D000439 ORTHO05D006172 4.5e-19 99.4 58 81.0
DCAR_027218 Daucus carota HOM05D000439 ORTHO05D006172 5.8e-19 99.0 60 78.3
Ca_10896_v3 Cicer arietinum L. HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 81.0
FvH4_4g15550 Fragaria vesca HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 82.8
FAN12G2572 Fragaria x ananassa HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 82.8
FAN17G2341 Fragaria x ananassa HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 82.8
FAN22G2148 Fragaria x ananassa HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 82.8
Gohir.A02G032200 Gossypium hirsutum HOM05D000439 ORTHO05D006172 7.6e-19 98.6 60 80.0
Lj3C734T11 Lonicera japonica HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 82.8
Manes.03G178500 Manihot esculenta HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 86.2
Oeu031230.1 Olea europaea HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 81.0
Sc19g0004140 Simmondsia chinensis HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 82.8
TPR.G5544 Trifolium pratense HOM05D000439 ORTHO05D006172 7.6e-19 98.6 58 81.0
MSTRG.24741 Avicennia marina HOM05D000439 ORTHO05D006172 9.9e-19 98.2 58 79.3
CAN.G490.11 Capsicum annuum HOM05D000439 ORTHO05D006172 9.9e-19 98.2 58 79.3
Duzib212G0312 Durio zibethinus HOM05D000439 ORTHO05D006172 9.9e-19 98.2 60 78.3
RcHm_v2.0_Chr4g0416211 Rosa chinensis HOM05D000439 ORTHO05D006172 9.9e-19 98.2 58 82.8
CsaV3_7G022490 Cucumis sativus L. HOM05D000439 ORTHO05D006172 1.3e-18 97.8 58 81.0
Solyc09g076050.4 Solanum lycopersicum HOM05D000439 ORTHO05D006172 1.3e-18 97.8 58 81.0
Sopen09g030890 Solanum pennellii HOM05D000439 ORTHO05D006172 1.3e-18 97.8 58 81.0
PGSC0003DMG400030083 Solanum tuberosum HOM05D000439 ORTHO05D006172 1.3e-18 97.8 58 81.0
GSVIVG01017978001 Vitis vinifera HOM05D000439 ORTHO05D006172 1.3e-18 97.8 58 77.6
Aa31LG8G9010 Aethionema arabicum HOM05D000439 ORTHO05D006172 1.7e-18 97.4 58 79.3
Migut.N00184 Erythranthe guttata HOM05D000439 ORTHO05D006172 1.7e-18 97.4 58 77.6
MELO3C012651.2 Cucumis melo HOM05D000439 ORTHO05D006172 2.2e-18 97.1 58 79.3
Sed0018003 Sechium edule HOM05D000439 ORTHO05D006172 2.2e-18 97.1 58 81.0
SGA_v2.0_scaffold550G52866 Striga asiatica HOM05D000439 ORTHO05D006172 2.2e-18 97.1 58 79.3
Ah.04g154630 Amaranthus hybridus HOM05D000439 ORTHO05D006172 2.9e-18 96.7 58 77.6
FAN07G0650 Fragaria x ananassa HOM05D000439 ORTHO05D006172 3.8e-18 96.3 58 81.0
Hund12129 Selenicereus undatus HOM05D000439 ORTHO05D006172 3.8e-18 96.3 58 77.6
CARHR098350 Cardamine hirsuta HOM05D000439 ORTHO05D006172 4.9e-18 95.9 58 79.3
Oeu050279.2 Olea europaea HOM05D000439 ORTHO05D006172 4.9e-18 95.9 58 79.3
Sp3g20210 Schrenkiella parvula HOM05D000439 ORTHO05D006172 4.9e-18 95.9 58 79.3
Nitab4.5_0000043g0100 Nicotiana tabacum HOM05D000439 ORTHO05D006172 8.4e-18 95.1 58 75.9
TWI09G0034 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 8.4e-18 95.1 58 79.3
AT3G22440 Arabidopsis thaliana HOM05D000439 ORTHO05D006172 1.1e-17 94.7 58 77.6
Lj5g0001183 Lotus japonicus HOM05D000439 ORTHO05D006172 1.1e-17 94.7 58 77.6
Lalb_Chr21g0304711 Lupinus albus HOM05D000439 ORTHO05D006172 1.1e-17 94.7 58 79.3
SGA_v2.0_scaffold166G38355 Striga asiatica HOM05D000439 ORTHO05D006172 1.1e-17 94.7 58 77.6
Actinidia23511 Actinidia chinensis HOM05D000439 ORTHO05D006172 1.4e-17 94.4 58 75.9
Lsat_1_v5_gn_7_67240 Lactuca sativa HOM05D000439 ORTHO05D006172 1.4e-17 94.4 58 77.6
Nitab4.5_0004258g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006172 1.9e-17 94.0 58 74.1
TWI53G0069 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 1.9e-17 94.0 58 77.6
CSS0012474 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006172 2.4e-17 93.6 58 77.6
Rhsim02G0025300 Rhododendron simsii HOM05D000439 ORTHO05D006172 2.4e-17 93.6 63 73.0
THA.LOC104809078 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 2.4e-17 93.6 59 78.0
Thhalv10020440m.g Eutrema salsugineum HOM05D000439 ORTHO05D006172 3.2e-17 93.2 58 75.9
Aqoxy5G00467 Aquilegia oxysepala HOM05D000439 ORTHO05D006172 7.1e-17 92.0 63 71.4
AL3G36750 Arabidopsis lyrata HOM05D000439 ORTHO05D006172 7.1e-17 92.0 57 75.4
Atru.chr6.3308 Acer truncatum HOM05D000439 ORTHO05D017148 9.3e-17 91.7 47 97.9
Thhalv10024868m.g Eutrema salsugineum HOM05D000439 ORTHO05D006172 9.3e-17 91.7 58 74.1
Nn4g26325 Nelumbo nucifera HOM05D000439 ORTHO05D006172 9.3e-17 91.7 58 74.1
ECA240G1500 Erigeron canadensis HOM05D000439 ORTHO05D006172 1.2e-16 91.3 58 75.9
Lsat_1_v5_gn_9_80141 Lactuca sativa HOM05D000439 ORTHO05D006172 1.2e-16 91.3 58 75.9
Nn1g02321 Nelumbo nucifera HOM05D000439 ORTHO05D006172 1.2e-16 91.3 58 74.1
CSS0046559 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006172 1.6e-16 90.9 58 75.9
Carub.0003s2262 Capsella rubella HOM05D000439 ORTHO05D006172 1.6e-16 90.9 58 74.1
TWI73G0578 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 1.6e-16 90.9 58 74.1
CSS0007127 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006172 2.1e-16 90.5 57 75.4
PSO832G2628 Papaver somniferum HOM05D000439 ORTHO05D006172 2.7e-16 90.1 64 68.8
PSO210G3898 Papaver somniferum HOM05D000439 ORTHO05D006172 6.0e-16 89.0 64 68.8
unitig_26.g10518 Utricularia gibba HOM05D000439 ORTHO05D006172 7.9e-16 88.6 58 72.4
CARHR221480 Cardamine hirsuta HOM05D000439 ORTHO05D006172 1.3e-15 87.8 58 70.7
THA.LOC104822271 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 1.3e-15 87.8 58 74.1
AL7G40950 Arabidopsis lyrata HOM05D000439 ORTHO05D006172 1.8e-15 87.4 58 72.4
Cc03_g03790 Coffea canephora HOM05D000439 ORTHO05D006172 2.3e-15 87.0 58 72.4
MBI11_g31279_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006172 3.0e-15 86.7 58 70.7
A01p32650 Brassica napus HOM05D000439 ORTHO05D006172 3.9e-15 86.3 58 74.1
BraA01t03393Z Brassica rapa HOM05D000439 ORTHO05D006172 3.9e-15 86.3 58 74.1
Carub.0007s2721 Capsella rubella HOM05D000439 ORTHO05D006172 5.1e-15 85.9 58 70.7
HanXRQChr06g0181431 Helianthus annuus HOM05D000439 ORTHO05D006172 6.7e-15 85.5 58 70.7
ECA240G1807 Erigeron canadensis HOM05D000439 ORTHO05D006172 8.7e-15 85.1 58 70.7
Sp7g13040 Schrenkiella parvula HOM05D000439 ORTHO05D006172 8.7e-15 85.1 58 70.7
AT4G14900 Arabidopsis thaliana HOM05D000439 ORTHO05D006172 1.5e-14 84.3 58 69.0
SHI00449 Sapria himalayana HOM05D000439 ORTHO05D006172 1.5e-14 84.3 58 70.7
BcaC09g49175 Brassica carinata HOM05D000439 ORTHO05D006172 3.3e-14 83.2 58 72.4
C01p41830 Brassica napus HOM05D000439 ORTHO05D006172 3.3e-14 83.2 58 72.4
BolC1t04137H Brassica oleracea HOM05D000439 ORTHO05D006172 3.3e-14 83.2 58 72.4
TAR636G3313 Trochodendron aralioides HOM05D000439 ORTHO05D006172 4.3e-14 82.8 59 69.5
Hma1.2p1_0602F.1_g187340 Hydrangea macrophylla HOM05D000439 ORTHO05D006172 1.6e-13 80.9 60 68.3
BcaB04g20517 Brassica carinata HOM05D000439 ORTHO05D006172 3.7e-13 79.7 55 69.1
CDE04G3570 Ceratophyllum demersum HOM05D000439 ORTHO05D006172 1.5e-11 74.3 57 59.6
CDE07G0898 Ceratophyllum demersum HOM05D000439 ORTHO05D006172 1.5e-11 74.3 57 59.6
HPP92_012138 Vanilla planifolia HOM05D000439 ORTHO05D006172 9.9e-11 71.6 53 64.2
ATR0697G242 Amborella trichopoda HOM05D000439 ORTHO05D006172 3.8e-10 69.7 58 53.4
Os07g0173200 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D006172 5.5e-09 65.9 60 50.0
Os03g0794900 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D006172 2.1e-08 63.9 59 50.8
QL08p005548 Quercus lobata HOM05D000439 ORTHO05D001363 2.7e-08 63.5 53 54.7
Zm00001eb301060 Zea mays HOM05D000439 ORTHO05D006172 7.9e-08 62.0 60 48.3
Zm00001eb117030 Zea mays HOM05D000439 ORTHO05D006172 1.8e-07 60.8 47 57.4
ATR1120G089 Amborella trichopoda HOM05D000439 ORTHO05D009874 3.9e-07 59.7 52 48.1
MBI14_g17371_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 3.9e-07 59.7 58 46.6
TAR629G2317 Trochodendron aralioides HOM05D000439 ORTHO05D001363 3.9e-07 59.7 53 52.8
MBI19_g33781_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 5.1e-07 59.3 58 46.6
TAR624G0363 Trochodendron aralioides HOM05D000439 ORTHO05D009874 6.7e-07 58.9 53 47.2
Cfa020234 Carpinus fangiana HOM05D000439 ORTHO05D001363 1.9e-06 57.4 98 33.7
MD11G1205100 Malus domestica HOM05D000439 ORTHO05D001363 1.9e-06 57.4 51 47.1
FAN28G0603 Fragaria x ananassa HOM05D000439 ORTHO05D009874 2.5e-06 57.0 60 38.3
Mapoly0043s0082 Marchantia polymorpha HOM05D000439 ORTHO05D001363 2.5e-06 57.0 58 41.4
Haze_09783 Corylus avellana HOM05D000439 ORTHO05D001363 3.3e-06 56.6 85 38.8
Pp3c26_11270 Physcomitrium patens HOM05D000439 ORTHO05D001363 3.3e-06 56.6 58 39.7
AagrBONN_evm.TU.Sc2ySwM_344.4515 Anthoceros agrestis HOM05D000439 ORTHO05D001363 4.3e-06 56.2 58 41.4
C05p40900 Brassica napus HOM05D000439 ORTHO05D006172 4.3e-06 56.2 30 83.3
BolC5t32832H Brassica oleracea HOM05D000439 ORTHO05D006172 4.3e-06 56.2 30 83.3
AUR62033634 Chenopodium quinoa HOM05D000439 ORTHO05D006172 4.3e-06 56.2 35 77.1
ATR0582G020 Amborella trichopoda HOM05D000439 ORTHO05D006154 5.6e-06 55.8 43 62.8
FvH4_1g05070 Fragaria vesca HOM05D000439 ORTHO05D009874 5.6e-06 55.8 60 36.7
FAN19G0670 Fragaria x ananassa HOM05D000439 ORTHO05D009874 5.6e-06 55.8 60 36.7
FAN26G1741 Fragaria x ananassa HOM05D000439 ORTHO05D009874 5.6e-06 55.8 60 36.7
Prupe.4G232500 Prunus persica HOM05D000439 ORTHO05D001363 5.6e-06 55.8 53 47.2
RcHm_v2.0_Chr2g0090711 Rosa chinensis HOM05D000439 ORTHO05D009874 5.6e-06 55.8 60 36.7
Thecc.09G112300 Theobroma cacao HOM05D000439 ORTHO05D009874 5.6e-06 55.8 58 41.4
vmacro05352 Vaccinium macrocarpon HOM05D000439 ORTHO05D009874 5.6e-06 55.8 48 50.0
MD02G1048900 Malus domestica HOM05D000439 ORTHO05D009874 7.4e-06 55.5 53 47.2
TWI34G1498 Tripterygium wilfordii HOM05D000439 ORTHO05D009874 7.4e-06 55.5 58 43.1
Aqoxy1G04005 Aquilegia oxysepala HOM05D000439 ORTHO05D001363 9.6e-06 55.1 53 45.3
CANSAT54G2200 Cannabis sativa HOM05D000439 ORTHO05D002302 9.6e-06 55.1 60 51.7
Rhsim07G0155300 Rhododendron simsii HOM05D000439 ORTHO05D009874 9.6e-06 55.1 48 47.9


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