Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 2.7e-283 978.0 495 100.0
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 4.5e-238 827.8 487 84.2
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 9.3e-236 820.1 491 82.1
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 4.6e-235 817.8 490 83.3
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 5.1e-234 814.3 487 82.8
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 2.8e-232 808.5 494 81.0
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 2.8e-232 808.5 493 81.1
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 3.7e-232 808.1 490 81.4
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 1.1e-231 806.6 492 80.7
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 1.8e-231 805.8 485 82.5
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 3.1e-231 805.1 492 80.5
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 4.0e-231 804.7 486 81.9
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 9.0e-231 803.5 493 81.7
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.5e-230 802.7 496 81.5
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 2.0e-230 802.4 491 81.1
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.6e-230 802.0 493 81.5
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 3.4e-230 801.6 492 81.1
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.5e-230 801.2 492 81.5
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 5.8e-230 800.8 491 80.0
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 1.0e-229 800.0 483 82.6
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 1.0e-229 800.0 488 83.8
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 6.5e-229 797.3 484 81.8
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 1.4e-228 796.2 485 81.0
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 2.5e-228 795.4 490 82.9
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 7.1e-228 793.9 489 80.4
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 1.2e-227 793.1 491 81.9
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.6e-227 792.7 489 80.4
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 2.1e-227 792.3 487 81.1
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 6.0e-227 790.8 485 81.2
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.0e-226 790.0 487 80.7
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 1.8e-226 789.3 489 81.2
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 1.8e-226 789.3 493 80.1
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 1.8e-226 789.3 489 80.2
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 8.7e-226 786.9 496 79.0
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 8.7e-226 786.9 487 80.5
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 4.3e-225 784.6 490 81.8
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 4.3e-225 784.6 490 81.8
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 2.8e-224 781.9 486 78.4
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 1.1e-223 780.0 485 80.4
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 1.8e-223 779.2 494 78.7
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 5.3e-223 777.7 493 78.3
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 9.0e-223 776.9 493 78.5
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.2e-222 776.5 491 78.0
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 2.0e-222 775.8 493 77.9
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 2.0e-222 775.8 493 77.9
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 2.0e-222 775.8 493 78.7
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.6e-222 775.4 491 78.6
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 4.5e-222 774.6 509 76.8
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 2.2e-221 772.3 491 78.0
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 5.0e-221 771.2 493 78.9
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 6.5e-221 770.8 494 78.7
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 1.1e-220 770.0 495 77.4
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.1e-220 770.0 493 78.1
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.1e-220 770.0 494 77.3
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 1.9e-220 769.2 493 77.9
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 2.5e-220 768.8 493 77.7
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 2.5e-220 768.8 494 77.7
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 2.5e-220 768.8 484 79.3
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 3.2e-220 768.5 493 78.5
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 3.2e-220 768.5 493 78.3
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 4.2e-220 768.1 503 77.1
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 5.5e-220 767.7 527 75.5
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 9.3e-220 766.9 493 77.5
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.6e-219 766.1 491 77.8
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 2.1e-219 765.8 485 79.4
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 2.7e-219 765.4 498 75.9
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 6.1e-219 764.2 493 77.5
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 1.0e-218 763.5 489 78.7
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 1.0e-218 763.5 496 77.6
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.3e-218 763.1 504 76.4
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.3e-218 763.1 511 75.3
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 1.8e-218 762.7 498 75.7
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 2.3e-218 762.3 491 78.4
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 3.9e-218 761.5 489 77.7
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 5.1e-218 761.1 498 75.7
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 8.7e-218 760.4 493 77.9
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.5e-217 759.6 493 77.7
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 1.9e-217 759.2 497 77.7
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 2.5e-217 758.8 484 76.9
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 3.3e-217 758.4 480 78.5
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 5.7e-217 757.7 491 76.4
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 7.4e-217 757.3 494 76.9
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.6e-216 756.1 487 78.6
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 8.2e-216 753.8 487 77.6
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 2.4e-215 752.3 494 76.7
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 6.9e-215 750.7 488 76.4
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 6.5e-213 744.2 492 75.8
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 3.2e-212 741.9 480 77.3
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 6.1e-211 737.6 527 72.7
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 1.4e-210 736.5 489 75.5
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.5e-209 733.0 487 75.2
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.5e-209 733.0 487 75.2
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 3.3e-209 731.9 488 74.8
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 4.8e-208 728.0 490 73.3
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 4.5e-206 721.5 480 75.4
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 4.5e-206 721.5 490 74.9
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 2.5e-204 715.7 480 74.2
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 4.2e-204 714.9 491 73.5
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 5.5e-204 714.5 490 72.9
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 1.6e-203 713.0 458 77.3
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 2.1e-203 712.6 502 71.9
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 5.7e-201 704.5 519 70.7
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 9.7e-201 703.7 491 71.7
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 1.2e-198 696.8 516 69.8
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 1.3e-197 693.3 491 73.9
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 9.4e-196 687.2 570 63.9
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.6e-195 686.4 489 70.1
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 6.1e-195 684.5 493 69.6
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.3e-192 676.8 589 60.3
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 2.8e-192 675.6 493 70.0
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 7.0e-191 671.0 489 68.1
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 9.1e-191 670.6 493 68.8
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 1.5e-188 663.3 490 69.4
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 1.5e-188 663.3 486 68.3
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 2.5e-188 662.5 489 68.5
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 2.1e-187 659.4 494 69.4
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 5.2e-186 654.8 497 64.2
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 2.0e-185 652.9 483 70.6
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 3.7e-184 648.7 464 71.3
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 6.3e-184 647.9 502 63.7
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 7.0e-183 644.4 484 68.0
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.3e-181 639.4 396 79.8
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 5.5e-180 634.8 490 66.3
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 7.2e-180 634.4 489 64.8
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.0e-173 614.0 501 65.9
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 5.6e-172 608.2 380 82.4
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 8.9e-162 574.3 550 58.5
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 7.5e-161 571.2 532 56.8
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.9e-160 568.5 345 81.7
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 4.1e-159 565.5 359 79.7
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.2e-158 563.9 357 80.1
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 3.0e-157 559.3 457 60.0
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 8.6e-157 557.8 495 58.8
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.6e-155 552.4 399 73.7
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 2.9e-152 542.7 393 71.8
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 7.1e-151 538.1 394 69.0
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 3.0e-149 532.7 364 75.5
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 2.5e-140 503.1 368 70.7
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.1e-134 483.4 305 80.3
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 5.3e-130 468.8 469 53.9
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 6.9e-130 468.4 305 76.7
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.4e-129 466.1 407 64.4
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.1e-125 452.2 281 81.1
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 1.5e-124 450.7 275 81.5
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.6e-121 439.9 273 79.9
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 1.5e-100 370.9 252 81.7
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 5.9e-97 359.0 233 74.2
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.7e-86 323.6 188 82.4
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.7e-80 304.3 181 84.0
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 6.5e-80 302.4 486 37.0
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 2.3e-77 293.9 204 74.5
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 1.5e-68 264.6 200 66.0
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 1.6e-65 254.6 298 56.4
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 5.7e-60 236.1 233 56.2
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 2.7e-57 227.3 322 44.7
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 1.0e-56 225.3 153 79.7
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 1.1e-55 221.9 134 81.3
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 1.1e-55 221.9 132 83.3
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.2e-52 211.8 126 81.7
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 1.0e-48 198.7 132 74.2
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 9.5e-47 192.2 114 81.6
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 3.2e-42 177.2 94 84.0
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 3.2e-42 177.2 94 84.0
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 7.8e-41 172.6 114 74.6
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 2.3e-40 171.0 139 61.2
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 3.2e-34 150.6 206 42.7
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 2.7e-25 120.9 66 89.4
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 3.5e-25 120.6 94 66.0
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 6.0e-25 119.8 88 69.3
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 3.9e-24 117.1 64 89.1
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 1.1e-23 115.5 63 88.9
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 2.4e-21 107.8 67 74.6
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.1e-21 107.5 65 80.0
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.2e-20 105.5 65 78.5
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.0e-20 104.8 68 73.5
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 4.4e-20 103.6 65 81.5
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 7.6e-20 102.8 65 75.4
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 1.6e-17 95.1 189 35.4
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.1e-17 94.7 77 64.9
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.2e-11 74.7 46 69.6
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 2.1e-09 68.2 38 76.3
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 7.4e-07 59.7 48 70.8
Zm00001eb170120 Zea mays HOM05D000137 ORTHO05D014725 1.6e-06 58.5 45 62.2
Zm00001eb388940 Zea mays HOM05D004043 ORTHO05D002193 1.6e-06 58.5 45 62.2
Atru.chr8.2677 Acer truncatum HOM05D003643 ORTHO05D052784 6.2e-06 56.6 62 53.2


User provided reference genes

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