Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1682 Acer truncatum HOM05D000539 ORTHO05D000233 8.7e-108 393.7 200 100.0
FAN18G1469 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.5e-14 81.3 148 35.8
SHI03380 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-11 73.6 132 34.1
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.9e-10 69.7 160 32.5
FAN02G4302 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-09 67.4 159 35.2
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-09 67.4 118 36.4
RcHm_v2.0_Chr4g0385451 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-09 64.7 154 32.5
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-09 64.7 199 28.1
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-08 64.3 154 33.1
MELO3C029675.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.6e-08 63.9 180 28.9
FAN04G3167 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.6e-08 63.9 166 33.7
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-08 63.9 163 31.3
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-08 63.5 199 28.1
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 2.1e-08 63.5 188 28.2
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 2.7e-08 63.2 153 30.1
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.7e-08 63.2 180 27.8
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 2.7e-08 63.2 191 27.2
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 3.5e-08 62.8 178 28.1
FvH4_5g26251 Fragaria vesca HOM05D000539 ORTHO05D000233 3.5e-08 62.8 117 37.6
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 4.6e-08 62.4 117 37.6
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 4.6e-08 62.4 164 29.3
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-07 61.2 154 30.5
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-07 61.2 192 28.6
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.3e-07 60.8 158 29.1
SHI15197 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-07 60.8 123 31.7
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 1.3e-07 60.8 157 29.9
FAN19G0618 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-07 60.5 115 36.5
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.3e-07 60.1 158 29.1
FvH4_4g08651 Fragaria vesca HOM05D000539 ORTHO05D000233 2.3e-07 60.1 160 30.6
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-07 60.1 180 26.7
FAN28G0003 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.0e-07 59.7 125 38.4
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 3.0e-07 59.7 188 29.3
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 3.0e-07 59.7 176 29.5
SHI28597 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-07 59.7 145 31.7
SHI44572 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-07 59.7 124 29.8
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 3.9e-07 59.3 103 40.8
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 3.9e-07 59.3 191 28.3
Ciclev10003689m.g Citrus clementina HOM05D000539 ORTHO05D000233 5.1e-07 58.9 53 52.8
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.1e-07 58.9 181 27.1
RcHm_v2.0_Chr1g0352291 Rosa chinensis HOM05D000539 ORTHO05D000233 5.1e-07 58.9 99 36.4
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 5.1e-07 58.9 185 28.1
SHI45387 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-07 58.9 131 29.8
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 6.6e-07 58.5 185 25.4
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 8.7e-07 58.2 188 28.7
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 8.7e-07 58.2 180 26.1
MELO3C028478.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.1e-06 57.8 96 36.5
FAN22G0531 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-06 57.4 118 39.0
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-06 57.4 101 37.6
RcHm_v2.0_Chr3g0460901 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-06 57.4 99 36.4
SHI34223 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-06 57.4 149 27.5
FAN09G4072 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.9e-06 57.0 178 27.5
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-06 56.6 149 31.5
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-06 56.6 149 31.5
SHI03283 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-06 56.2 82 39.0
MELO3C032476.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.3e-06 55.8 130 32.3
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.3e-06 55.8 175 28.0
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 5.6e-06 55.5 225 26.2
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-06 55.5 196 27.0
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-06 55.1 238 26.1
FAN09G3363 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.1 187 29.4
SHI28804 Sapria himalayana HOM05D000616 ORTHO05D000233 7.3e-06 55.1 140 27.9
FvH4_3g14361 Fragaria vesca HOM05D000539 ORTHO05D000233 9.6e-06 54.7 120 38.3
SHI25574 Sapria himalayana HOM05D000616 ORTHO05D000233 9.6e-06 54.7 161 30.4
SHI45801 Sapria himalayana HOM05D000616 ORTHO05D000233 9.6e-06 54.7 113 31.9


User provided reference genes

Program Settings