Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 1.1e-114 416.8 221 100.0
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.2e-65 253.8 203 72.9
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 1.6e-57 226.9 222 63.5
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 1.6e-57 226.9 210 64.8
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 4.2e-55 218.8 229 62.0
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 7.2e-55 218.0 212 65.1
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 1.0e-53 214.2 217 63.6
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 1.8e-53 213.4 217 63.1
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 3.0e-53 212.6 225 60.9
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 5.7e-52 208.4 219 62.1
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 7.5e-52 208.0 219 61.6
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 1.7e-51 206.8 220 61.8
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 6.3e-51 204.9 208 62.0
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 8.3e-51 204.5 210 61.4
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 2.4e-50 203.0 217 60.8
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 1.2e-49 200.7 213 62.0
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 2.0e-49 199.9 218 58.3
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 6.5e-48 194.9 248 54.8
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.9e-47 193.4 226 57.5
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 3.2e-47 192.6 225 56.0
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 3.2e-47 192.6 243 55.1
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.7e-46 189.5 204 60.3
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 6.1e-46 188.3 229 56.8
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 8.8e-45 184.5 209 58.9
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.8e-44 181.0 185 62.2
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 6.3e-43 178.3 231 55.4
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 2.7e-41 172.9 222 54.1
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 7.7e-41 171.4 223 55.6
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 5.0e-40 168.7 205 59.0
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 3.4e-36 156.0 220 52.3
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.4e-35 151.8 172 58.1
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 6.4e-35 151.8 172 58.1
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 8.3e-35 151.4 219 54.3
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.4e-34 150.6 249 49.4
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 1.4e-34 150.6 207 52.7
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 3.2e-34 149.4 206 52.4
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 1.2e-33 147.5 225 48.4
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 3.5e-33 146.0 181 54.7
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 3.5e-33 146.0 208 52.9
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 5.9e-33 145.2 208 55.3
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.0e-32 144.4 211 54.5
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.0e-32 144.4 218 47.7
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.7e-32 143.7 225 48.0
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 2.3e-32 143.3 188 52.1
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.5e-31 140.6 228 46.1
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 1.9e-31 140.2 224 47.8
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.3e-31 139.4 215 52.6
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.3e-31 139.4 215 52.6
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.3e-31 139.4 192 53.1
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 3.3e-31 139.4 225 47.6
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 5.6e-31 138.7 217 52.1
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 7.3e-31 138.3 172 55.2
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 7.3e-31 138.3 192 53.1
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 1.2e-30 137.5 175 57.7
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 2.1e-30 136.7 227 45.8
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.0e-29 134.4 216 47.7
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 2.3e-29 133.3 234 44.4
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 3.1e-29 132.9 234 44.9
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 3.1e-29 132.9 195 47.7
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 3.1e-29 132.9 233 44.6
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 5.2e-29 132.1 208 47.1
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 5.2e-29 132.1 221 45.7
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 1.2e-28 131.0 241 47.7
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.5e-28 130.6 213 51.6
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 2.0e-28 130.2 215 49.8
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 4.4e-28 129.0 199 46.7
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 4.4e-28 129.0 170 51.8
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 5.8e-28 128.6 236 43.2
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 5.8e-28 128.6 242 44.2
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 1.3e-27 127.5 184 52.2
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 8.3e-27 124.8 218 46.8
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 8.3e-27 124.8 234 43.2
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 1.9e-26 123.6 234 42.7
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 2.4e-26 123.2 226 44.7
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 2.4e-26 123.2 245 43.3
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 3.2e-26 122.9 185 49.2
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.2e-25 120.9 263 40.3
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 2.0e-25 120.2 126 59.5
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 2.7e-25 119.8 249 41.4
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 2.7e-25 119.8 249 41.4
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 3.5e-25 119.4 192 47.4
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 7.8e-25 118.2 232 43.1
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 7.8e-25 118.2 234 42.7
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 1.0e-24 117.9 249 41.4
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 1.3e-24 117.5 191 49.7
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 3.9e-24 115.9 237 43.5
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 3.9e-24 115.9 237 40.1
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 3.9e-24 115.9 154 54.5
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 5.0e-24 115.5 264 39.0
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 6.6e-24 115.2 239 40.2
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 8.6e-24 114.8 237 43.0
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 1.1e-23 114.4 225 39.1
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 9.5e-23 111.3 212 44.3
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 1.6e-22 110.5 245 42.0
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.1e-22 110.2 239 40.6
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 2.8e-22 109.8 208 43.8
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 2.8e-22 109.8 253 39.9
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 6.2e-22 108.6 260 38.5
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 6.2e-22 108.6 204 43.1
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 6.2e-22 108.6 251 39.8
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 1.1e-21 107.8 248 39.9
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 1.4e-21 107.5 240 39.6
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.4e-21 107.5 265 38.9
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 1.8e-21 107.1 239 41.4
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 2.3e-21 106.7 184 49.5
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 1.2e-20 104.4 222 42.3
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 1.2e-20 104.4 198 42.9
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 2.0e-20 103.6 202 42.6
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 2.0e-20 103.6 183 47.5
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 2.6e-20 103.2 248 39.5
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 2.6e-20 103.2 243 39.9
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 7.5e-20 101.7 221 41.6
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 2.2e-19 100.1 223 40.8
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 4.9e-19 99.0 99 62.6
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 8.3e-19 98.2 232 40.1
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 2.4e-18 96.7 188 42.0
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 4.1e-18 95.9 251 37.1
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.2e-17 94.4 192 43.8
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 2.1e-17 93.6 246 37.8
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 7.8e-17 91.7 192 41.7
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 2.3e-16 90.1 169 45.0
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 5.1e-16 89.0 195 40.0
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 5.1e-16 89.0 270 34.4
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 5.1e-16 89.0 120 52.5
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 1.5e-15 87.4 226 37.6
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 4.3e-15 85.9 112 50.9
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.1e-14 83.6 303 32.7
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 6.2e-14 82.0 183 39.3
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 8.1e-14 81.6 164 43.3
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 1.5e-12 77.4 154 42.2
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 5.8e-12 75.5 138 44.2
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 5.8e-12 75.5 310 30.3
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 7.6e-12 75.1 151 43.0
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 9.9e-12 74.7 203 37.4
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 9.9e-12 74.7 308 30.5
Gohir.D11G325975 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.9e-12 74.7 105 46.7
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 1.7e-11 73.9 143 42.7
Gohir.A07G174000 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.9e-11 73.2 96 55.2
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 4.9e-11 72.4 182 40.1
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.4e-10 70.9 152 39.5
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 4.1e-10 69.3 170 38.8
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 1.6e-09 67.4 280 31.1
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 2.7e-09 66.6 189 38.6
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 3.5e-09 66.2 169 36.7
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 6.0e-09 65.5 190 34.7
Actinidia15890 Actinidia chinensis HOM05D004795 ORTHO05D005518 1.7e-08 63.9 133 42.1
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 1.1e-07 61.2 87 51.7
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.1e-06 57.0 115 45.2
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.1e-06 57.0 115 45.2
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 4.7e-06 55.8 82 51.2


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