Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1527 Acer truncatum HOM05D000459 ORTHO05D052206 3.1e-63 245.0 126 100.0
Atru.chr1.1530 Acer truncatum HOM05D000459 ORTHO05D000798 6.6e-37 157.5 81 98.8
Atru.chr1.1524 Acer truncatum HOM05D000459 ORTHO05D052476 6.4e-24 114.4 57 98.2
Ciclev10012313m.g Citrus clementina HOM05D000459 ORTHO05D000798 5.4e-23 111.3 81 69.1
Manes.08G066900 Manihot esculenta HOM05D000459 ORTHO05D000798 2.7e-14 82.4 80 55.0
Cpa.g.sc33.200 Carica papaya HOM05D000459 ORTHO05D000798 4.6e-14 81.6 81 53.1
GSVIVG01025848001 Vitis vinifera HOM05D000459 ORTHO05D000798 7.9e-14 80.9 81 55.6
Sed0002829 Sechium edule HOM05D000459 ORTHO05D000798 6.6e-13 77.8 81 49.4
ClCG10G016520 Citrullus lanatus HOM05D000459 ORTHO05D000798 1.1e-12 77.0 81 48.1
MELO3C009723.2 Cucumis melo HOM05D000459 ORTHO05D000798 1.1e-12 77.0 81 48.1
TWI74G0888 Tripterygium wilfordii HOM05D000459 ORTHO05D000798 1.1e-12 77.0 65 61.5
Eucgr.A02179 Eucalyptus grandis HOM05D000459 ORTHO05D000798 1.5e-12 76.6 81 54.3
CiPaw.10G123800 Carya illinoinensis HOM05D000459 ORTHO05D000798 1.9e-12 76.3 76 53.9
CsaV3_3G039810 Cucumis sativus L. HOM05D000459 ORTHO05D000798 2.5e-12 75.9 81 50.6
CiPaw.09G163800 Carya illinoinensis HOM05D000459 ORTHO05D000798 3.3e-12 75.5 81 54.3
QL07p014528 Quercus lobata HOM05D000459 ORTHO05D000798 4.3e-12 75.1 81 53.1
Rhsim04G0118600 Rhododendron simsii HOM05D000459 ORTHO05D000798 5.6e-12 74.7 82 50.0
Sc13g0000800 Simmondsia chinensis HOM05D000459 ORTHO05D000798 9.6e-12 73.9 81 55.6
vmacro08971 Vaccinium macrocarpon HOM05D000459 ORTHO05D000798 1.6e-11 73.2 82 48.8
Cfa019937 Carpinus fangiana HOM05D000459 ORTHO05D000798 3.6e-11 72.0 81 49.4
TAR623G1755 Trochodendron aralioides HOM05D000459 ORTHO05D000798 3.6e-11 72.0 80 51.2
arahy.Tifrunner.gnm1.ann1.RTS81I Arachis hypogaea HOM05D000459 ORTHO05D000798 6.2e-11 71.2 89 49.4
PGR042G1509 Punica granatum HOM05D000459 ORTHO05D000798 1.4e-10 70.1 83 50.6
Haze_20307 Corylus avellana HOM05D000459 ORTHO05D000798 1.8e-10 69.7 81 48.1
Oeu044230.1 Olea europaea HOM05D000459 ORTHO05D000798 1.5e-09 66.6 82 48.8
TPR.G27974 Trifolium pratense HOM05D000459 ORTHO05D000798 3.4e-09 65.5 86 45.3
MSTRG.19765 Avicennia marina HOM05D000459 ORTHO05D000798 7.6e-09 64.3 82 47.6
SGA_v2.0_scaffold66G22312 Striga asiatica HOM05D000459 ORTHO05D000798 1.3e-08 63.5 82 50.0
Sed0014914 Sechium edule HOM05D000459 ORTHO05D000798 2.2e-08 62.8 81 44.4
AUR62020994 Chenopodium quinoa HOM05D000459 ORTHO05D000798 8.4e-08 60.8 81 43.2
Nn7g37116 Nelumbo nucifera HOM05D000459 ORTHO05D000798 2.4e-07 59.3 76 46.1
Glyma.19G124800 Glycine max HOM05D000459 ORTHO05D000798 4.2e-07 58.5 81 42.0
Lalb_Chr14g0365371 Lupinus albus HOM05D000459 ORTHO05D000798 4.2e-07 58.5 81 40.7
PSO384G4868 Papaver somniferum HOM05D000459 ORTHO05D000798 4.2e-07 58.5 83 43.4
CsaV3_4G029140 Cucumis sativus L. HOM05D000459 ORTHO05D000798 5.5e-07 58.2 81 42.0
Thhalv10018815m.g Eutrema salsugineum HOM05D000459 ORTHO05D000798 7.1e-07 57.8 85 43.5
Oeu057812.1 Olea europaea HOM05D000459 ORTHO05D000798 7.1e-07 57.8 82 45.1
EL10Ac3g07346 Beta vulgaris HOM05D000459 ORTHO05D000798 1.2e-06 57.0 81 42.0
A07p34570 Brassica napus HOM05D000459 ORTHO05D000798 1.6e-06 56.6 85 43.5
BraA07t31075Z Brassica rapa HOM05D000459 ORTHO05D000798 1.6e-06 56.6 85 43.5
Migut.J01560 Erythranthe guttata HOM05D000459 ORTHO05D000798 1.6e-06 56.6 82 41.5
Hund24513 Selenicereus undatus HOM05D000459 ORTHO05D000798 1.6e-06 56.6 81 40.7
ClCG04G005990 Citrullus lanatus HOM05D000459 ORTHO05D000798 2.1e-06 56.2 74 43.2
MELO3C027242.2 Cucumis melo HOM05D000459 ORTHO05D000798 2.7e-06 55.8 81 40.7
Mapoly0021s0149 Marchantia polymorpha HOM05D000459 ORTHO05D000798 2.7e-06 55.8 82 42.7
BcaB03g15134 Brassica carinata HOM05D000459 ORTHO05D000798 3.5e-06 55.5 85 43.5
PSO339G0860 Papaver somniferum HOM05D000459 ORTHO05D000798 3.5e-06 55.5 83 41.0
Psat3g082400 Pisum sativum HOM05D000459 ORTHO05D000798 3.5e-06 55.5 81 38.3
AT1G68070 Arabidopsis thaliana HOM05D000459 ORTHO05D000798 4.6e-06 55.1 85 43.5
CARHR060730 Cardamine hirsuta HOM05D000459 ORTHO05D000798 4.6e-06 55.1 85 42.4
TPR.G36911 Trifolium pratense HOM05D000459 ORTHO05D000798 4.6e-06 55.1 86 43.0
BcaC08g46234 Brassica carinata HOM05D000459 ORTHO05D000798 6.0e-06 54.7 84 42.9
C06p41960 Brassica napus HOM05D000459 ORTHO05D000798 6.0e-06 54.7 84 42.9
BolC6t39235H Brassica oleracea HOM05D000459 ORTHO05D000798 6.0e-06 54.7 84 42.9
BcaB05g24336 Brassica carinata HOM05D000459 ORTHO05D000798 7.9e-06 54.3 85 43.5
Ca_08350_v3 Cicer arietinum L. HOM05D000459 ORTHO05D000798 7.9e-06 54.3 81 42.0
Cc06_g22800 Coffea canephora HOM05D000459 ORTHO05D000798 7.9e-06 54.3 82 45.1
Lj1g0003706 Lotus japonicus HOM05D000459 ORTHO05D000798 7.9e-06 54.3 81 38.3


User provided reference genes

Program Settings