Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1456 Acer truncatum HOM05D005186 ORTHO05D006278 2.7e-64 248.4 121 100.0
Atru.chr5.265 Acer truncatum HOM05D005186 ORTHO05D006278 7.8e-19 97.4 66 81.8
Nn1g01074 Nelumbo nucifera HOM05D005186 ORTHO05D006278 2.0e-14 82.8 74 60.8
TAR375G0993 Trochodendron aralioides HOM05D005186 ORTHO05D006278 1.1e-12 77.0 64 65.6
Aqoxy7G00728 Aquilegia oxysepala HOM05D005186 ORTHO05D006278 5.4e-12 74.7 71 56.3
Nn6g34030 Nelumbo nucifera HOM05D005186 ORTHO05D006278 2.1e-11 72.8 77 55.8
PSO017G1100 Papaver somniferum HOM05D005186 ORTHO05D006278 4.6e-11 71.6 66 59.1
PSO170G0780 Papaver somniferum HOM05D005186 ORTHO05D006278 4.6e-11 71.6 66 59.1
TAR374G0329 Trochodendron aralioides HOM05D005186 ORTHO05D006278 1.0e-10 70.5 72 54.2
DCAR_020192 Daucus carota HOM05D005186 ORTHO05D006278 1.7e-10 69.7 69 55.1
Prupe.2G277700 Prunus persica HOM05D005186 ORTHO05D006278 1.7e-10 69.7 74 54.1
Sc13g0007880 Simmondsia chinensis HOM05D005186 ORTHO05D006278 1.7e-10 69.7 69 56.5
MBI04_g37589_MAGBIO Magnolia biondii HOM05D005186 ORTHO05D006278 2.3e-10 69.3 70 54.3
Sabra15G0140200 Salix brachista HOM05D005186 ORTHO05D006278 3.9e-10 68.6 74 52.7
Potri.012G126000 Populus trichocarpa HOM05D005186 ORTHO05D006278 5.1e-10 68.2 74 52.7
FvH4_7g27600 Fragaria vesca HOM05D005186 ORTHO05D006278 6.6e-10 67.8 69 55.1
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 6.6e-10 67.8 69 55.1
FAN03G1399 Fragaria x ananassa HOM05D005186 ORTHO05D006278 6.6e-10 67.8 69 55.1
FAN06G2498 Fragaria x ananassa HOM05D005186 ORTHO05D006278 6.6e-10 67.8 69 55.1
FAN06G5126 Fragaria x ananassa HOM05D005186 ORTHO05D006278 6.6e-10 67.8 69 55.1
RcHm_v2.0_Chr1g0374461 Rosa chinensis HOM05D005186 ORTHO05D006278 6.6e-10 67.8 69 55.1
Hund11823 Selenicereus undatus HOM05D005186 ORTHO05D006278 6.6e-10 67.8 66 56.1
AUR62002195 Chenopodium quinoa HOM05D005186 ORTHO05D006278 8.6e-10 67.4 64 59.4
AUR62015515 Chenopodium quinoa HOM05D005186 ORTHO05D006278 8.6e-10 67.4 64 59.4
COL.COLO4_14129 Corchorus olitorius HOM05D005186 ORTHO05D006278 8.6e-10 67.4 67 56.7
Dinv28566 Davidia involucrata HOM05D005186 ORTHO05D006278 8.6e-10 67.4 74 51.4
Sabra12G0094900 Salix brachista HOM05D005186 ORTHO05D006278 1.1e-09 67.0 74 52.7
CANSAT56G0052 Cannabis sativa HOM05D005186 ORTHO05D006278 1.5e-09 66.6 74 55.4
Migut.F00469 Erythranthe guttata HOM05D005186 ORTHO05D006278 1.5e-09 66.6 74 51.4
Oeu022491.2 Olea europaea HOM05D005186 ORTHO05D006278 1.9e-09 66.2 74 51.4
TPR.G3671 Trifolium pratense HOM05D005186 ORTHO05D006278 3.3e-09 65.5 74 48.6
Eucgr.A02891 Eucalyptus grandis HOM05D005186 ORTHO05D006278 4.3e-09 65.1 67 53.7
QL09p019611 Quercus lobata HOM05D005186 ORTHO05D006278 4.3e-09 65.1 64 54.7
SGA_v2.0_scaffold2G01194 Striga asiatica HOM05D005186 ORTHO05D006278 4.3e-09 65.1 74 50.0
Duzib147G0627 Durio zibethinus HOM05D000665 ORTHO05D003147 5.6e-09 64.7 46 71.7
FAN10G1701 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.6e-09 64.7 69 53.6
Haze_13870 Corylus avellana HOM05D005186 ORTHO05D006278 7.3e-09 64.3 77 50.6
Lj3g0017931 Lotus japonicus HOM05D005186 ORTHO05D006278 7.3e-09 64.3 69 52.2
RhsimUnG0046700 Rhododendron simsii HOM05D005186 ORTHO05D006278 7.3e-09 64.3 65 60.0
SGA_v2.0_scaffold543G52822 Striga asiatica HOM05D005186 ORTHO05D006278 7.3e-09 64.3 74 50.0
Ah.07g207900 Amaranthus hybridus HOM05D005186 ORTHO05D006278 9.5e-09 63.9 64 54.7
Ca_25005_v3 Cicer arietinum L. HOM05D005186 ORTHO05D006278 9.5e-09 63.9 72 48.6
Ciclev10005111m.g Citrus clementina HOM05D005186 ORTHO05D006278 9.5e-09 63.9 64 57.8
Lalb_Chr19g0140361 Lupinus albus HOM05D005186 ORTHO05D006278 9.5e-09 63.9 76 44.7
Potri.015G126800 Populus trichocarpa HOM05D005186 ORTHO05D006278 9.5e-09 63.9 74 50.0
Atru.chr3.1441 Acer truncatum HOM05D000034 ORTHO05D000037 1.2e-08 63.5 36 83.3
ClCG09G015150 Citrullus lanatus HOM05D005186 ORTHO05D006278 1.2e-08 63.5 74 50.0
MELO3C018660.2 Cucumis melo HOM05D005186 ORTHO05D006278 1.2e-08 63.5 74 50.0
Duzib205G1009 Durio zibethinus HOM05D005186 ORTHO05D006278 1.2e-08 63.5 67 52.2
Psat7g207000 Pisum sativum HOM05D005186 ORTHO05D006278 1.2e-08 63.5 74 47.3
TWI39G1272 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 1.2e-08 63.5 74 50.0
Sed0005126 Sechium edule HOM05D005186 ORTHO05D006278 1.6e-08 63.2 67 52.2
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.6e-08 63.2 53 62.3
GSVIVG01018630001 Vitis vinifera HOM05D005186 ORTHO05D006278 1.6e-08 63.2 67 52.2
Thhalv10004201m.g Eutrema salsugineum HOM05D005186 ORTHO05D006278 2.1e-08 62.8 63 54.0
Sabra14G0043300 Salix brachista HOM05D005186 ORTHO05D006278 2.1e-08 62.8 82 45.1
Sp2g25560 Schrenkiella parvula HOM05D005186 ORTHO05D006278 2.1e-08 62.8 63 54.0
vmacro06793 Vaccinium macrocarpon HOM05D005186 ORTHO05D006278 2.1e-08 62.8 65 58.5
Manes.06G135200 Manihot esculenta HOM05D005186 ORTHO05D006278 2.8e-08 62.4 63 52.4
PGR142G0385 Punica granatum HOM05D005186 ORTHO05D006278 2.8e-08 62.4 69 49.3
Sed0012571 Sechium edule HOM05D005186 ORTHO05D006278 2.8e-08 62.4 67 49.3
Thecc.03G156500 Theobroma cacao HOM05D005186 ORTHO05D006278 2.8e-08 62.4 67 52.2
CsaV3_7G006320 Cucumis sativus L. HOM05D005186 ORTHO05D006278 3.6e-08 62.0 67 50.7
Peaxi162Scf00241g00318 Petunia axillaris HOM05D005186 ORTHO05D006278 3.6e-08 62.0 67 49.3
Actinidia13575 Actinidia chinensis HOM05D005186 ORTHO05D006278 4.7e-08 61.6 67 53.7
Cc02_g04200 Coffea canephora HOM05D005186 ORTHO05D006278 4.7e-08 61.6 69 49.3
Hma1.2p1_0432F.1_g151690 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 4.7e-08 61.6 64 53.1
SalBow2G2587 Salvia bowleyana HOM05D005186 ORTHO05D006278 4.7e-08 61.6 69 47.8
VMungo1127G0816 Vigna mungo HOM05D005186 ORTHO05D006278 4.7e-08 61.6 76 47.4
Atru.chr1.716 Acer truncatum HOM05D005186 ORTHO05D006278 6.2e-08 61.2 74 50.0
Nitab4.5_0003875g0030 Nicotiana tabacum HOM05D005186 ORTHO05D006278 6.2e-08 61.2 67 49.3
GSVIVG01000255001 Vitis vinifera HOM05D000665 ORTHO05D003147 6.2e-08 61.2 51 64.7
ATR1153G063 Amborella trichopoda HOM05D005186 ORTHO05D006278 8.1e-08 60.8 64 56.2
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 8.1e-08 60.8 36 77.8
Hma1.2p1_1640F.1_g295100 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 8.1e-08 60.8 67 55.2
Lalb_Chr01g0000291 Lupinus albus HOM05D005186 ORTHO05D006278 8.1e-08 60.8 72 44.4
HPP92_022436 Vanilla planifolia HOM05D005186 ORTHO05D006278 8.1e-08 60.8 63 52.4
Atru.chr12.2093 Acer truncatum HOM05D000665 ORTHO05D003147 1.1e-07 60.5 34 82.4
AT5G62390 Arabidopsis thaliana HOM05D005186 ORTHO05D006278 1.1e-07 60.5 63 52.4
MSTRG.128 Avicennia marina HOM05D005186 ORTHO05D006278 1.1e-07 60.5 74 47.3
EL10Ac3g05838 Beta vulgaris HOM05D005186 ORTHO05D006278 1.1e-07 60.5 65 55.4
CARHR276170 Cardamine hirsuta HOM05D005186 ORTHO05D006278 1.1e-07 60.5 63 52.4
Glyma.12G005300 Glycine max HOM05D005186 ORTHO05D006278 1.1e-07 60.5 72 48.6
Nitab4.5_0001383g0010 Nicotiana tabacum HOM05D005186 ORTHO05D006278 1.1e-07 60.5 67 47.8
AL8G39220 Arabidopsis lyrata HOM05D005186 ORTHO05D006278 1.4e-07 60.1 63 52.4
Carub.0008s2307 Capsella rubella HOM05D005186 ORTHO05D006278 1.4e-07 60.1 63 52.4
TWI23G1038 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 1.4e-07 60.1 74 47.3
Cpa.g.sc3.315 Carica papaya HOM05D005186 ORTHO05D006278 1.8e-07 59.7 67 50.7
Medtr4g036110 Medicago truncatula HOM05D005186 ORTHO05D006278 1.8e-07 59.7 67 47.8
Nn3g18746 Nelumbo nucifera HOM05D005186 ORTHO05D006278 1.8e-07 59.7 60 53.3
CSS0003747 Camellia sinensis var. sinensis HOM05D005186 ORTHO05D006278 2.3e-07 59.3 62 56.5
Glyma.09G231200 Glycine max HOM05D005186 ORTHO05D006278 2.3e-07 59.3 71 47.9
Manes.14G035500 Manihot esculenta HOM05D005186 ORTHO05D006278 2.3e-07 59.3 63 54.0
Phvul.011G006100 Phaseolus vulgaris HOM05D005186 ORTHO05D006278 2.3e-07 59.3 71 47.9
Lsat_1_v5_gn_2_129120 Lactuca sativa HOM05D005186 ORTHO05D006278 3.1e-07 58.9 70 52.9
unitig_1.g29355 Utricularia gibba HOM05D005186 ORTHO05D006278 3.1e-07 58.9 64 50.0
unitig_747.g22057 Utricularia gibba HOM05D005186 ORTHO05D006278 3.1e-07 58.9 64 50.0
Aa31LG11G1230 Aethionema arabicum HOM05D005186 ORTHO05D006278 4.0e-07 58.5 63 50.8
Solyc03g083970.3 Solanum lycopersicum HOM05D005186 ORTHO05D006278 6.8e-07 57.8 67 46.3
Sopen03g023730 Solanum pennellii HOM05D005186 ORTHO05D006278 6.8e-07 57.8 67 46.3
PGSC0003DMG400013858 Solanum tuberosum HOM05D005186 ORTHO05D006278 6.8e-07 57.8 67 46.3
Migut.F01178 Erythranthe guttata HOM05D005186 ORTHO05D006278 1.2e-06 57.0 65 52.3
HanXRQChr14g0461411 Helianthus annuus HOM05D005186 ORTHO05D006278 1.2e-06 57.0 67 50.7
Oeu042561.2 Olea europaea HOM05D005186 ORTHO05D006278 1.2e-06 57.0 69 47.8
Sabra04G0082100 Salix brachista HOM05D000665 ORTHO05D003147 1.2e-06 57.0 35 74.3
BcaNung02779 Brassica carinata HOM05D005186 ORTHO05D006278 1.5e-06 56.6 64 51.6
A01p12890 Brassica napus HOM05D005186 ORTHO05D006278 1.5e-06 56.6 64 51.6
BraA01t01233Z Brassica rapa HOM05D005186 ORTHO05D006278 1.5e-06 56.6 64 51.6
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 1.5e-06 56.6 63 50.8
ECA238G0955 Erigeron canadensis HOM05D005186 ORTHO05D006278 1.5e-06 56.6 75 48.0
Gohir.A03G058600 Gossypium hirsutum HOM05D005186 ORTHO05D006278 1.5e-06 56.6 67 50.7
Potri.004G135901 Populus trichocarpa HOM05D000665 ORTHO05D003147 1.5e-06 56.6 35 74.3
Sabra19G0001300 Salix brachista HOM05D000034 ORTHO05D000037 1.5e-06 56.6 35 74.3
arahy.Tifrunner.gnm1.ann1.7NC073 Arachis hypogaea HOM05D005186 ORTHO05D006278 2.0e-06 56.2 74 47.3
arahy.Tifrunner.gnm1.ann1.UNN1LQ Arachis hypogaea HOM05D005186 ORTHO05D006278 2.0e-06 56.2 74 47.3
CAN.G48.15 Capsicum annuum HOM05D005186 ORTHO05D006278 2.6e-06 55.8 67 44.8
Cfa020931 Carpinus fangiana HOM05D000665 ORTHO05D003147 2.6e-06 55.8 46 69.6
Haze_19363 Corylus avellana HOM05D000034 ORTHO05D000037 2.6e-06 55.8 46 69.6
C01p15530 Brassica napus HOM05D005186 ORTHO05D006278 3.4e-06 55.5 64 50.0
BolC1t01505H Brassica oleracea HOM05D005186 ORTHO05D006278 3.4e-06 55.5 64 50.0
PGR042G0730 Punica granatum HOM05D005186 ORTHO05D006278 4.4e-06 55.1 74 44.6
Gohir.D03G107500 Gossypium hirsutum HOM05D005186 ORTHO05D006278 5.8e-06 54.7 63 52.4
Gorai.003G113800 Gossypium raimondii HOM05D005186 ORTHO05D006278 5.8e-06 54.7 63 52.4
BolC3t18705H Brassica oleracea HOM05D005186 ORTHO05D006278 7.6e-06 54.3 64 50.0
QL10p037558 Quercus lobata HOM05D000034 ORTHO05D000037 7.6e-06 54.3 46 69.6
BcaC01g02462 Brassica carinata HOM05D005186 ORTHO05D006278 9.9e-06 53.9 64 50.0
BcaC01g02463 Brassica carinata HOM05D005186 ORTHO05D006278 9.9e-06 53.9 64 50.0
C03p64500 Brassica napus HOM05D005186 ORTHO05D006278 9.9e-06 53.9 64 50.0
Cpa.g.sc34.138 Carica papaya HOM05D000034 ORTHO05D000037 9.9e-06 53.9 36 72.2
Sabra19G0011500 Salix brachista HOM05D000034 ORTHO05D003147 9.9e-06 53.9 32 75.0


User provided reference genes

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