Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1430 Acer truncatum HOM05D000194 ORTHO05D000069 1.6e-45 185.7 88 100.0
Atru.chr11.1524 Acer truncatum HOM05D000194 ORTHO05D000069 3.5e-45 184.5 88 98.9
Ciclev10031122m.g Citrus clementina HOM05D000194 ORTHO05D000069 1.3e-31 139.4 90 74.4
Prupe.1G297200 Prunus persica HOM05D000194 ORTHO05D000069 4.6e-29 131.0 90 72.2
Cpa.g.sc1.175 Carica papaya HOM05D000194 ORTHO05D000069 2.3e-28 128.6 92 69.6
MD13G1054700 Malus domestica HOM05D000194 ORTHO05D000069 3.9e-28 127.9 90 70.0
RcHm_v2.0_Chr4g0437041 Rosa chinensis HOM05D000194 ORTHO05D000069 8.7e-28 126.7 90 70.0
CiPaw.05G120100 Carya illinoinensis HOM05D000194 ORTHO05D000069 1.5e-27 125.9 90 71.1
FAN12G0589 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.5e-27 125.9 90 70.0
FvH4_4g28910 Fragaria vesca HOM05D000194 ORTHO05D000069 3.3e-27 124.8 90 68.9
Manes.14G092200 Manihot esculenta HOM05D000194 ORTHO05D000069 4.3e-27 124.4 90 66.7
Sabra08G0085600 Salix brachista HOM05D000194 ORTHO05D000069 7.4e-27 123.6 90 70.0
QL03p073031 Quercus lobata HOM05D000194 ORTHO05D000069 9.6e-27 123.2 90 68.9
Potri.010G136100 Populus trichocarpa HOM05D000194 ORTHO05D000069 2.1e-26 122.1 90 67.8
MD16G1053600 Malus domestica HOM05D000194 ORTHO05D000069 2.8e-26 121.7 92 66.3
FAN22G1740 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.1e-25 119.8 90 67.8
Thecc.02G320000 Theobroma cacao HOM05D000194 ORTHO05D000069 1.4e-25 119.4 90 61.1
Nn3g17578 Nelumbo nucifera HOM05D000194 ORTHO05D000069 3.1e-25 118.2 91 65.9
Sabra10G0104600 Salix brachista HOM05D000194 ORTHO05D000069 1.5e-24 115.9 91 64.8
Potri.008G113200 Populus trichocarpa HOM05D000194 ORTHO05D000069 3.4e-24 114.8 90 65.6
CiPaw.06G095900 Carya illinoinensis HOM05D000194 ORTHO05D000069 4.5e-24 114.4 90 63.3
Duzib248G0629 Durio zibethinus HOM05D000194 ORTHO05D000069 4.9e-23 110.9 90 57.8
Psat2g086920 Pisum sativum HOM05D000194 ORTHO05D000069 4.9e-23 110.9 87 59.8
Gohir.A13G089200 Gossypium hirsutum HOM05D000194 ORTHO05D000069 6.5e-23 110.5 90 58.9
Lalb_Chr10g0099301 Lupinus albus HOM05D000194 ORTHO05D000069 6.5e-23 110.5 90 60.0
TWI75G1851 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 6.5e-23 110.5 91 61.5
GSVIVG01010126001 Vitis vinifera HOM05D000194 ORTHO05D000069 6.5e-23 110.5 89 61.8
Glyma.02G125200 Glycine max HOM05D000194 ORTHO05D000069 1.4e-22 109.4 90 57.8
Manes.06G078400 Manihot esculenta HOM05D000194 ORTHO05D000069 2.5e-22 108.6 90 60.0
Lj2g0026439 Lotus japonicus HOM05D000194 ORTHO05D000069 3.2e-22 108.2 91 58.2
Medtr5g048860 Medicago truncatula HOM05D000194 ORTHO05D000069 5.5e-22 107.5 90 56.7
CANSAT64G0687 Cannabis sativa HOM05D000194 ORTHO05D000069 9.3e-22 106.7 90 61.1
Gohir.D13G086600 Gossypium hirsutum HOM05D000194 ORTHO05D000069 1.2e-21 106.3 90 57.8
Gorai.013G098600 Gossypium raimondii HOM05D000194 ORTHO05D000069 1.2e-21 106.3 90 57.8
Duzib268G0957 Durio zibethinus HOM05D000194 ORTHO05D000069 1.6e-21 105.9 88 55.7
TPR.G920 Trifolium pratense HOM05D000194 ORTHO05D000069 2.7e-21 105.1 90 56.7
Ca_30981_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 3.5e-21 104.8 90 56.7
arahy.Tifrunner.gnm1.ann1.P7Z3M8 Arachis hypogaea HOM05D000194 ORTHO05D000069 4.6e-21 104.4 90 53.3
arahy.Tifrunner.gnm1.ann1.500GQ6 Arachis hypogaea HOM05D000194 ORTHO05D000069 7.9e-21 103.6 90 52.2
CSS0045811 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 1.0e-20 103.2 91 59.3
MBI15_g41247_MAGBIO Magnolia biondii HOM05D000194 ORTHO05D000069 1.0e-20 103.2 90 60.0
Lalb_Chr17g0341611 Lupinus albus HOM05D000194 ORTHO05D000069 1.3e-20 102.8 95 57.9
PSO017G0342 Papaver somniferum HOM05D000194 ORTHO05D000069 1.3e-20 102.8 90 60.0
TAR374G0528 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.3e-20 102.8 91 58.2
Dinv15571 Davidia involucrata HOM05D000194 ORTHO05D000069 2.3e-20 102.1 91 58.2
Glyma.01G068600 Glycine max HOM05D000194 ORTHO05D000069 2.3e-20 102.1 90 54.4
Cc11_g11360 Coffea canephora HOM05D000194 ORTHO05D000069 3.9e-20 101.3 91 58.2
TWI31G0740 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 3.9e-20 101.3 92 57.6
PSO478G3772 Papaver somniferum HOM05D000194 ORTHO05D000069 5.1e-20 100.9 90 58.9
CSS0030015 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 6.7e-20 100.5 91 57.1
TWI79G0336 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 1.1e-19 99.8 91 56.0
arahy.Tifrunner.gnm1.ann1.U7HMBF Arachis hypogaea HOM05D000194 ORTHO05D000069 1.5e-19 99.4 92 56.5
CSS0008614 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 2.5e-19 98.6 91 56.0
CSS0047230 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 3.3e-19 98.2 91 57.1
Ca_05185_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 4.3e-19 97.8 84 57.1
Phvul.002G110500 Phaseolus vulgaris HOM05D000194 ORTHO05D000069 4.3e-19 97.8 88 54.5
arahy.Tifrunner.gnm1.ann1.L9MWY5 Arachis hypogaea HOM05D000194 ORTHO05D000069 1.3e-18 96.3 92 55.4
TAR622G0611 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.8e-18 94.4 81 58.0
THA.LOC104808478 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 6.3e-18 94.0 95 56.8
Actinidia13413 Actinidia chinensis HOM05D000194 ORTHO05D000069 1.1e-17 93.2 80 60.0
CsaV3_5G018750 Cucumis sativus L. HOM05D000194 ORTHO05D000069 1.1e-17 93.2 90 54.4
Hund05810 Selenicereus undatus HOM05D000194 ORTHO05D000069 3.1e-17 91.7 91 51.6
Nn4g23576 Nelumbo nucifera HOM05D000194 ORTHO05D000069 4.1e-17 91.3 81 58.0
ClCG01G007300 Citrullus lanatus HOM05D000194 ORTHO05D000069 6.9e-17 90.5 90 52.2
Dinv33998 Davidia involucrata HOM05D000194 ORTHO05D000069 6.9e-17 90.5 87 58.6
THA.LOC104823065 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 6.9e-17 90.5 92 50.0
Hma1.2p1_1348F.1_g277290 Hydrangea macrophylla HOM05D000194 ORTHO05D000069 1.2e-16 89.7 107 47.7
PGSC0003DMG400019659 Solanum tuberosum HOM05D000194 ORTHO05D000069 1.2e-16 89.7 94 48.9
VMungo1215G3218 Vigna mungo HOM05D000194 ORTHO05D000069 1.2e-16 89.7 88 47.7
THA.LOC104822888 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 4.5e-16 87.8 93 49.5
THA.LOC104822889 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 4.5e-16 87.8 93 49.5
Nitab4.5_0001196g0030 Nicotiana tabacum HOM05D000194 ORTHO05D000069 1.0e-15 86.7 91 47.3
Sed0001870 Sechium edule HOM05D000194 ORTHO05D000069 1.7e-15 85.9 92 48.9
Solyc05g010610.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 1.7e-15 85.9 94 48.9
MSTRG.787 Avicennia marina HOM05D000194 ORTHO05D000069 2.2e-15 85.5 91 52.7
Gohir.D02G132400 Gossypium hirsutum HOM05D000194 ORTHO05D000069 2.2e-15 85.5 66 60.6
Sopen05g006420 Solanum pennellii HOM05D000194 ORTHO05D000069 2.9e-15 85.1 94 47.9
Sed0000734 Sechium edule HOM05D000194 ORTHO05D000069 5.0e-15 84.3 90 50.0
AUR62003039 Chenopodium quinoa HOM05D000194 ORTHO05D000069 6.5e-15 84.0 89 48.3
Sc14g0007710 Simmondsia chinensis HOM05D000194 ORTHO05D000069 6.5e-15 84.0 91 49.5
Aqoxy3G03778 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 8.5e-15 83.6 85 48.2
Eucgr.B03106 Eucalyptus grandis HOM05D000194 ORTHO05D000069 8.5e-15 83.6 97 48.5
PGR102G1318 Punica granatum HOM05D000194 ORTHO05D000069 8.5e-15 83.6 94 52.1
AUR62007846 Chenopodium quinoa HOM05D000194 ORTHO05D000069 1.4e-14 82.8 89 47.2
THA.LOC104821985 Tarenaya hassleriana HOM05D000194 ORTHO05D000069 2.5e-14 82.0 93 50.5
Hma1.2p1_0235F.1_g098580 Hydrangea macrophylla HOM05D000194 ORTHO05D000069 3.2e-14 81.6 91 49.5
Haze_11842 Corylus avellana HOM05D000194 ORTHO05D000069 4.2e-14 81.3 139 38.8
Peaxi162Scf00188g00813 Petunia axillaris HOM05D000194 ORTHO05D000069 7.2e-14 80.5 85 47.1
CsaV3_5G033600 Cucumis sativus L. HOM05D000194 ORTHO05D000069 9.4e-14 80.1 92 48.9
CAN.G182.6 Capsicum annuum HOM05D000194 ORTHO05D000069 1.2e-13 79.7 94 45.7
Oeu021812.1 Olea europaea HOM05D000194 ORTHO05D000069 1.6e-13 79.3 84 47.6
Nitab4.5_0003339g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 3.6e-13 78.2 91 47.3
EL10Ac6g14657 Beta vulgaris HOM05D000194 ORTHO05D000069 4.6e-13 77.8 95 47.4
MSTRG.7719 Avicennia marina HOM05D000194 ORTHO05D000069 1.4e-12 76.3 88 51.1
DCAR_023730 Daucus carota HOM05D000194 ORTHO05D000069 1.8e-12 75.9 91 48.4
PGSC0003DMG400008805 Solanum tuberosum HOM05D000194 ORTHO05D000069 1.8e-12 75.9 91 47.3
Rhsim09G0119700 Rhododendron simsii HOM05D000194 ORTHO05D000069 8.8e-12 73.6 82 52.4
COL.COLO4_27772 Corchorus olitorius HOM05D000194 ORTHO05D000069 1.1e-11 73.2 55 61.8
Aqoxy3G00573 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 2.5e-11 72.0 89 41.6
MBI14_g08221_MAGBIO Magnolia biondii HOM05D000194 ORTHO05D000069 2.5e-11 72.0 80 46.2
Lj3A1025G48 Lonicera japonica HOM05D000194 ORTHO05D000069 4.3e-11 71.2 83 55.4
Oeu001638.1 Olea europaea HOM05D000194 ORTHO05D000069 4.3e-11 71.2 89 46.1
ClCG05G023410 Citrullus lanatus HOM05D000194 ORTHO05D000069 5.7e-11 70.9 81 45.7
ECA233G2717 Erigeron canadensis HOM05D000194 ORTHO05D000069 5.7e-11 70.9 81 45.7
HanXRQChr08g0215071 Helianthus annuus HOM05D000194 ORTHO05D000069 7.4e-11 70.5 91 46.2
HanXRQChr12g0365131 Helianthus annuus HOM05D000194 ORTHO05D000069 9.7e-11 70.1 91 46.2
CAN.G366.7 Capsicum annuum HOM05D000194 ORTHO05D000069 1.7e-10 69.3 91 44.0
Migut.L01149 Erythranthe guttata HOM05D000194 ORTHO05D000069 1.7e-10 69.3 63 60.3
Sopen01g005670 Solanum pennellii HOM05D000194 ORTHO05D000069 1.7e-10 69.3 90 44.4
vmacro10460 Vaccinium macrocarpon HOM05D000194 ORTHO05D000069 2.2e-10 68.9 80 46.2
Peaxi162Scf00026g00312 Petunia axillaris HOM05D000194 ORTHO05D000069 2.8e-10 68.6 91 44.0
Gohir.A03G107300 Gossypium hirsutum HOM05D000194 ORTHO05D000069 1.1e-09 66.6 51 60.8
Solyc01g010130.4 Solanum lycopersicum HOM05D000194 ORTHO05D000069 1.1e-09 66.6 90 43.3
SalBow2G1177 Salvia bowleyana HOM05D000194 ORTHO05D000069 1.4e-09 66.2 75 44.0
Gorai.005G148300 Gossypium raimondii HOM05D000194 ORTHO05D000069 2.4e-09 65.5 51 58.8
Nitab4.5_0002491g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 2.4e-09 65.5 91 41.8
Lsat_1_v5_gn_8_36721 Lactuca sativa HOM05D000194 ORTHO05D000069 3.1e-09 65.1 91 44.0
Nitab4.5_0000259g0030 Nicotiana tabacum HOM05D000194 ORTHO05D000069 4.1e-09 64.7 94 41.5
Nitab4.5_0002309g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 5.3e-09 64.3 94 41.5
MELO3C012177.2 Cucumis melo HOM05D000194 ORTHO05D000069 6.9e-09 63.9 73 46.6
Ah.02g127580 Amaranthus hybridus HOM05D000194 ORTHO05D000069 1.2e-08 63.2 77 39.0
Nitab4.5_0000149g0220 Nicotiana tabacum HOM05D000194 ORTHO05D000069 1.2e-08 63.2 80 45.0
HPP92_018234 Vanilla planifolia HOM05D000194 ORTHO05D000069 2.6e-08 62.0 78 41.0
Oeu027420.4 Olea europaea HOM05D000194 ORTHO05D000069 7.7e-08 60.5 75 44.0
TPR.G29767 Trifolium pratense HOM05D000194 ORTHO05D000069 1.9e-06 55.8 52 57.7
Sopen04g001200 Solanum pennellii HOM05D000194 ORTHO05D000069 5.5e-06 54.3 86 44.2
TAR629G3476 Trochodendron aralioides HOM05D000194 ORTHO05D000069 7.2e-06 53.9 77 45.5


User provided reference genes

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