Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1412 Acer truncatum HOM05D006596 ORTHO05D008497 1.4e-72 276.2 143 100.0
Ciclev10010964m.g Citrus clementina HOM05D006596 ORTHO05D008497 5.4e-19 98.2 162 43.2
Manes.09G043000 Manihot esculenta HOM05D006596 ORTHO05D008497 1.1e-16 90.5 151 46.4
Prupe.7G091000 Prunus persica HOM05D006596 ORTHO05D008497 3.3e-16 89.0 165 37.0
TWI74G0317 Tripterygium wilfordii HOM05D006596 ORTHO05D008497 4.3e-16 88.6 168 36.3
Duzib093G1929 Durio zibethinus HOM05D006596 ORTHO05D008497 2.1e-15 86.3 167 43.1
Cpa.g.sc222.25 Carica papaya HOM05D006596 ORTHO05D008497 6.2e-15 84.7 159 38.4
Potri.006G200800 Populus trichocarpa HOM05D006596 ORTHO05D008497 1.8e-14 83.2 160 38.1
THA.LOC104816628 Tarenaya hassleriana HOM05D006596 ORTHO05D008497 1.8e-14 83.2 138 41.3
MD12G1044100 Malus domestica HOM05D006596 ORTHO05D008497 6.8e-14 81.3 168 37.5
COL.COLO4_29516 Corchorus olitorius HOM05D006596 ORTHO05D008497 1.5e-13 80.1 170 40.0
FAN14G5569 Fragaria x ananassa HOM05D006596 ORTHO05D008497 2.0e-13 79.7 157 36.9
FAN02G0500 Fragaria x ananassa HOM05D006596 ORTHO05D008497 1.3e-12 77.0 157 36.9
FvH4_6g20810 Fragaria vesca HOM05D006596 ORTHO05D008497 1.7e-12 76.6 157 36.3
TAR636G1255 Trochodendron aralioides HOM05D006596 ORTHO05D008497 1.7e-12 76.6 167 35.9
CANSAT64G0970 Cannabis sativa HOM05D006596 ORTHO05D008497 2.9e-12 75.9 141 38.3
Thecc.05G108600 Theobroma cacao HOM05D006596 ORTHO05D008497 2.9e-12 75.9 156 39.1
FAN09G2534 Fragaria x ananassa HOM05D006596 ORTHO05D008497 3.7e-12 75.5 157 35.7
RcHm_v2.0_Chr3g0476881 Rosa chinensis HOM05D006596 ORTHO05D008497 4.9e-12 75.1 153 37.9
RcHm_v2.0_Chr3g0476991 Rosa chinensis HOM05D008360 ORTHO05D010532 1.4e-11 73.6 162 35.8
Aa31sc52G230 Aethionema arabicum HOM05D006596 ORTHO05D008497 5.4e-11 71.6 152 39.5
QL07p026858 Quercus lobata HOM05D006596 ORTHO05D008497 9.2e-11 70.9 171 40.4
Hma1.2p1_0969F.1_g242592 Hydrangea macrophylla HOM05D006596 ORTHO05D008497 1.2e-10 70.5 138 37.0
CSS0017956 Camellia sinensis var. sinensis HOM05D006596 ORTHO05D008497 6.0e-10 68.2 170 34.7
CARHR207160 Cardamine hirsuta HOM05D006596 ORTHO05D008497 7.8e-10 67.8 142 35.9
AL6G16490 Arabidopsis lyrata HOM05D006596 ORTHO05D008497 1.0e-09 67.4 155 34.8
Ca_11668_v3 Cicer arietinum L. HOM05D006596 ORTHO05D008497 1.0e-09 67.4 162 35.8
Nitab4.5_0009788g0010 Nicotiana tabacum HOM05D006596 ORTHO05D008497 1.0e-09 67.4 138 39.1
Sabra06G0154500 Salix brachista HOM05D006596 ORTHO05D008497 1.0e-09 67.4 161 35.4
Rhsim03G0062300 Rhododendron simsii HOM05D006596 ORTHO05D008497 1.3e-09 67.0 159 37.1
Dinv11886 Davidia involucrata HOM05D006596 ORTHO05D008497 1.7e-09 66.6 115 34.8
Thhalv10012543m.g Eutrema salsugineum HOM05D006596 ORTHO05D008497 3.9e-09 65.5 137 39.4
Haze_20109 Corylus avellana HOM05D006596 ORTHO05D008497 5.1e-09 65.1 167 35.3
EL10Ac4g10108 Beta vulgaris HOM05D006596 ORTHO05D008497 8.6e-09 64.3 151 33.1
Medtr1g055295 Medicago truncatula HOM05D006596 ORTHO05D008497 8.6e-09 64.3 151 34.4
Cfa020083 Carpinus fangiana HOM05D006596 ORTHO05D008497 1.1e-08 63.9 167 35.9
Hma1.2p1_1654F.1_g295850 Hydrangea macrophylla HOM05D006596 ORTHO05D008497 1.1e-08 63.9 109 35.8
Sp6g36450 Schrenkiella parvula HOM05D006596 ORTHO05D008497 1.5e-08 63.5 136 39.0
PGR004G2850 Punica granatum HOM05D006596 ORTHO05D008497 1.9e-08 63.2 131 36.6
Glyma.02G192800 Glycine max HOM05D006596 ORTHO05D008497 3.3e-08 62.4 140 34.3
Aqoxy1G00603 Aquilegia oxysepala HOM05D006596 ORTHO05D008497 4.3e-08 62.0 161 35.4
VMungo0720G1474 Vigna mungo HOM05D006596 ORTHO05D008497 5.6e-08 61.6 158 35.4
PSO384G2212 Papaver somniferum HOM05D006596 ORTHO05D008497 7.3e-08 61.2 156 34.0
Nn4g26016 Nelumbo nucifera HOM05D006596 ORTHO05D008497 9.5e-08 60.8 161 32.9
C09p70390 Brassica napus HOM05D006596 ORTHO05D008497 1.6e-07 60.1 128 35.9
Lj5g0008032 Lotus japonicus HOM05D006596 ORTHO05D008497 2.1e-07 59.7 145 33.1
BolC9t59785H Brassica oleracea HOM05D006596 ORTHO05D008497 3.6e-07 58.9 150 34.7
Nn6g34601 Nelumbo nucifera HOM05D006596 ORTHO05D008497 6.2e-07 58.2 129 33.3
CiPaw.09G023000 Carya illinoinensis HOM05D006596 ORTHO05D008497 1.1e-06 57.4 166 34.3
Sc09g0001040 Simmondsia chinensis HOM05D006596 ORTHO05D008497 1.1e-06 57.4 160 34.4
BraA10t45038Z Brassica rapa HOM05D006596 ORTHO05D008497 1.4e-06 57.0 143 34.3
Cc06_g06860 Coffea canephora HOM05D006596 ORTHO05D008497 1.4e-06 57.0 137 32.1
Gohir.D11G332300 Gossypium hirsutum HOM05D006596 ORTHO05D008497 1.8e-06 56.6 108 35.2
Gorai.007G363200 Gossypium raimondii HOM05D006596 ORTHO05D008497 3.1e-06 55.8 94 39.4
A10p29980 Brassica napus HOM05D006596 ORTHO05D008497 6.8e-06 54.7 145 35.9
MELO3C009563.2 Cucumis melo HOM05D006596 ORTHO05D008497 8.9e-06 54.3 111 34.2


User provided reference genes

Program Settings