Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.139 Acer truncatum HOM05D000151 ORTHO05D000074 3.7e-51 204.5 99 100.0
Atru.chr1.161 Acer truncatum HOM05D000151 ORTHO05D000074 1.7e-24 115.9 75 73.3
Atru.chr1.137 Acer truncatum HOM05D000151 ORTHO05D000074 7.3e-23 110.5 78 67.9
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 3.6e-22 108.2 74 71.6
Atru.chr13.339 Acer truncatum HOM05D000151 ORTHO05D000074 1.1e-13 80.1 89 55.1
Atru.chr2.1462 Acer truncatum HOM05D000048 ORTHO05D000436 1.2e-12 76.6 76 48.7
Atru.chr9.2350 Acer truncatum HOM05D000151 ORTHO05D000074 7.5e-12 73.9 92 45.7
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 4.1e-10 68.2 88 38.6
Ciclev10009143m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.1e-09 65.9 81 44.4
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-09 65.9 76 46.1
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-09 65.9 76 46.1
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-09 65.9 76 46.1
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-09 65.9 76 46.1
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 4.6e-09 64.7 83 42.2
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 6.0e-09 64.3 83 43.4
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 7.8e-09 63.9 83 39.8
CiPaw.07G005300 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.7e-08 62.8 89 33.7
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 1.7e-08 62.8 81 39.5
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.7e-08 62.8 78 41.0
Atru.chr9.2200 Acer truncatum HOM05D000151 ORTHO05D000074 2.3e-08 62.4 47 61.7
CAN.G311.85 Capsicum annuum HOM05D000151 ORTHO05D000074 3.0e-08 62.0 83 42.2
Eucgr.H00638 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.0e-08 62.0 85 40.0
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 3.0e-08 62.0 83 41.0
Peaxi162Scf00096g01844 Petunia axillaris HOM05D000151 ORTHO05D000074 3.0e-08 62.0 86 37.2
Ciclev10017461m.g Citrus clementina HOM05D000151 ORTHO05D000074 3.9e-08 61.6 78 47.4
Lalb_Chr23g0265911 Lupinus albus HOM05D000151 ORTHO05D000074 3.9e-08 61.6 83 38.6
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 3.9e-08 61.6 82 37.8
Eucgr.H00630 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.6e-08 60.8 85 38.8
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.1e-07 60.1 77 39.0
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.5e-07 59.7 83 38.6
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 1.5e-07 59.7 81 40.7
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 1.9e-07 59.3 81 40.7
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.5e-07 58.9 79 40.5
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-07 58.9 75 41.3
Eucgr.H00631 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.5e-07 58.9 75 45.3
Eucgr.H00636 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.5e-07 58.9 72 45.8
Eucgr.H00629 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.3e-07 58.5 75 44.0
Solyc02g092020.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.3e-07 58.5 79 38.0
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-07 58.5 95 41.1
Atru.chr10.13 Acer truncatum HOM05D000151 ORTHO05D000074 4.3e-07 58.2 92 39.1
Aqoxy6G01889 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.3e-07 58.2 84 41.7
CAN.G1305.8 Capsicum annuum HOM05D000151 ORTHO05D000074 4.3e-07 58.2 76 40.8
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 4.3e-07 58.2 78 35.9
Ciclev10020625m.g Citrus clementina HOM05D000151 ORTHO05D000074 5.6e-07 57.8 77 39.0
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 5.6e-07 57.8 93 35.5
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 5.6e-07 57.8 77 40.3
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 5.6e-07 57.8 85 38.8
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 7.3e-07 57.4 75 37.3
Eucgr.H00639 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.3e-07 57.4 77 42.9
Peaxi162Scf00174g01118 Petunia axillaris HOM05D000151 ORTHO05D000074 7.3e-07 57.4 73 42.5
PGSC0003DMG400041939 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.3e-07 57.4 81 39.5
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.5e-07 57.0 89 31.5
Eucgr.H00647 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-06 56.6 76 40.8
Eucgr.L02300 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-06 56.6 76 40.8
CAN.G1804.2 Capsicum annuum HOM05D000151 ORTHO05D000074 1.6e-06 56.2 76 39.5
Atru.chr9.1120 Acer truncatum HOM05D000151 ORTHO05D000074 2.1e-06 55.8 76 40.8
Dinv38968 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-06 55.8 80 38.8
Dinv40802 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-06 55.8 73 37.0
Eucgr.H00645 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.1e-06 55.8 76 40.8
HanXRQChr02g0042691 Helianthus annuus HOM05D000151 ORTHO05D000074 2.1e-06 55.8 74 39.2
Lj2P477T7 Lonicera japonica HOM05D000151 ORTHO05D000074 2.1e-06 55.8 80 37.5
Peaxi162Scf00038g02631 Petunia axillaris HOM05D000151 ORTHO05D000074 2.1e-06 55.8 70 38.6
PGSC0003DMG400012282 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.1e-06 55.8 79 41.8
Dinv23958 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-06 55.5 66 43.9
Sopen08g030610 Solanum pennellii HOM05D000151 ORTHO05D000074 2.8e-06 55.5 76 43.4
PGSC0003DMG400038971 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.8e-06 55.5 76 38.2
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-06 55.5 76 42.1
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 3.6e-06 55.1 73 41.1
Peaxi162Scf00089g00158 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-06 55.1 76 39.5
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 3.6e-06 55.1 79 38.0
TPR.G38135 Trifolium pratense HOM05D000151 ORTHO05D000074 3.6e-06 55.1 79 31.6
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.6e-06 55.1 76 39.5
Aqoxy2G01390 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.7e-06 54.7 75 38.7
CAN.G1166.9 Capsicum annuum HOM05D000151 ORTHO05D000074 4.7e-06 54.7 76 39.5
Dinv38965 Davidia involucrata HOM05D000151 ORTHO05D000074 4.7e-06 54.7 61 45.9
Eucgr.H03049 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.7e-06 54.7 76 39.5
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.7e-06 54.7 76 39.5
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.2e-06 54.3 76 43.4
CAN.G1711.9 Capsicum annuum HOM05D000151 ORTHO05D002065 6.2e-06 54.3 75 38.7
Lj2C500G3 Lonicera japonica HOM05D000151 ORTHO05D000074 6.2e-06 54.3 78 38.5
Peaxi162Scf00017g00215 Petunia axillaris HOM05D000151 ORTHO05D000074 6.2e-06 54.3 82 36.6
Sopen04g035710 Solanum pennellii HOM05D000151 ORTHO05D000074 6.2e-06 54.3 68 41.2
PGSC0003DMG400009960 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.2e-06 54.3 68 41.2
TAR362G0453 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.2e-06 54.3 79 39.2
PGSC0003DMG400001736 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.1e-06 53.9 78 38.5
PGSC0003DMG400012285 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.1e-06 53.9 76 39.5
TAR365G0814 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.1e-06 53.9 76 38.2


User provided reference genes

Program Settings