Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1384 Acer truncatum HOM05D004413 ORTHO05D005199 4.1e-47 191.0 95 100.0
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 2.0e-38 162.2 94 85.1
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 3.2e-20 101.7 99 54.5
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 1.6e-19 99.4 98 60.2
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 2.7e-19 98.6 97 58.8
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.1e-15 85.1 87 58.6
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 1.2e-14 83.2 97 54.6
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.2e-14 83.2 86 57.0
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 1.2e-14 83.2 86 57.0
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 1.6e-14 82.8 84 54.8
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 4.5e-14 81.3 97 48.5
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 4.5e-14 81.3 93 53.8
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 1.0e-13 80.1 91 52.7
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 2.3e-13 79.0 97 48.5
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 5.0e-13 77.8 99 51.5
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 6.5e-13 77.4 86 54.7
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 6.5e-13 77.4 94 51.1
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 6.5e-13 77.4 94 50.0
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 8.6e-13 77.0 84 54.8
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 4.2e-12 74.7 88 48.9
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 4.2e-12 74.7 78 57.7
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 1.2e-11 73.2 95 47.4
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.6e-11 72.8 96 49.0
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 1.6e-11 72.8 99 47.5
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 2.1e-11 72.4 97 46.4
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 4.7e-11 71.2 96 47.9
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 4.7e-11 71.2 96 47.9
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 4.7e-11 71.2 96 47.9
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.7e-11 71.2 78 53.8
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 6.1e-11 70.9 79 53.2
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 1.0e-10 70.1 84 54.8
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.0e-10 70.1 86 54.7
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 1.4e-10 69.7 91 45.1
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 3.0e-10 68.6 94 46.8
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 5.2e-10 67.8 93 47.3
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 6.8e-10 67.4 98 43.9
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 8.8e-10 67.0 92 48.9
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 8.8e-10 67.0 94 45.7
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 1.2e-09 66.6 78 51.3
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 4.4e-09 64.7 109 44.0
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 4.4e-09 64.7 109 44.0
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 4.4e-09 64.7 95 45.3
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 3.7e-08 61.6 61 57.4
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 3.7e-08 61.6 91 42.9
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 3.7e-08 61.6 68 54.4
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 8.3e-08 60.5 49 57.1
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 1.1e-07 60.1 97 42.3
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 1.8e-07 59.3 79 44.3
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 7.0e-07 57.4 97 41.2
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 9.2e-07 57.0 72 47.2
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 3.5e-06 55.1 72 48.6
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 3.5e-06 55.1 81 40.7


User provided reference genes

Program Settings