Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1340 Acer truncatum HOM05D003060 ORTHO05D001716 2.3e-157 558.9 294 100.0
Atru.chr2.14 Acer truncatum HOM05D003060 ORTHO05D001716 2.8e-139 498.8 353 79.0
Ciclev10000070m.g Citrus clementina HOM05D003060 ORTHO05D001716 1.7e-80 303.5 366 51.6
Duzib116G0105 Durio zibethinus HOM05D003060 ORTHO05D001716 4.2e-58 229.2 358 43.9
COL.COLO4_05531 Corchorus olitorius HOM05D003060 ORTHO05D001716 1.8e-56 223.8 357 44.5
Prupe.6G322700 Prunus persica HOM05D003060 ORTHO05D001716 5.1e-56 222.2 357 42.3
TWI36G0905 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 5.1e-56 222.2 360 43.3
Gorai.009G287300 Gossypium raimondii HOM05D003060 ORTHO05D001716 6.7e-56 221.9 361 42.1
TWI56G0319 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 6.7e-56 221.9 357 43.4
Gohir.A05G272000 Gossypium hirsutum HOM05D003060 ORTHO05D001716 1.5e-55 220.7 361 42.1
CiPaw.08G163000 Carya illinoinensis HOM05D003060 ORTHO05D001716 3.3e-55 219.5 371 43.4
Haze_04161 Corylus avellana HOM05D003060 ORTHO05D001716 3.3e-55 219.5 368 42.1
Cfa006614 Carpinus fangiana HOM05D003060 ORTHO05D001716 4.3e-55 219.2 382 41.6
Duzib211G0658 Durio zibethinus HOM05D003060 ORTHO05D001716 7.4e-55 218.4 355 43.9
Gohir.D05G274200 Gossypium hirsutum HOM05D003060 ORTHO05D001716 1.3e-54 217.6 361 41.6
Duzib177G0733 Durio zibethinus HOM05D003060 ORTHO05D001716 4.8e-54 215.7 354 43.2
Thecc.08G198500 Theobroma cacao HOM05D003060 ORTHO05D001716 3.1e-53 213.0 362 41.7
ClCG02G015530 Citrullus lanatus HOM05D003060 ORTHO05D001716 6.9e-53 211.8 370 40.0
Manes.09G169200 Manihot esculenta HOM05D003060 ORTHO05D001716 3.4e-52 209.5 357 41.5
MELO3C004230.2 Cucumis melo HOM05D003060 ORTHO05D001716 5.8e-52 208.8 370 38.9
CsaV3_2G006550 Cucumis sativus L. HOM05D003060 ORTHO05D001716 5.8e-52 208.8 370 38.6
CANSAT54G0820 Cannabis sativa HOM05D003060 ORTHO05D001716 9.9e-52 208.0 363 39.7
TWI12G1080 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 3.8e-51 206.1 358 42.7
Potri.005G026800 Populus trichocarpa HOM05D003060 ORTHO05D001716 7.9e-49 198.4 287 43.6
MD12G1216400 Malus domestica HOM05D003060 ORTHO05D001716 1.8e-48 197.2 283 42.8
FAN02G1847 Fragaria x ananassa HOM05D003060 ORTHO05D001716 2.3e-48 196.8 352 40.3
FAN05G5493 Fragaria x ananassa HOM05D003060 ORTHO05D001716 6.7e-48 195.3 352 39.8
Thhalv10003560m.g Eutrema salsugineum HOM05D003060 ORTHO05D001716 3.3e-47 193.0 377 38.2
FAN09G4310 Fragaria x ananassa HOM05D003060 ORTHO05D001716 7.4e-47 191.8 351 38.7
QL03p012691 Quercus lobata HOM05D003060 ORTHO05D001716 1.3e-46 191.0 210 51.0
Aa31LG11G9390 Aethionema arabicum HOM05D003060 ORTHO05D001716 1.6e-46 190.7 358 39.1
RcHm_v2.0_Chr3g0455351 Rosa chinensis HOM05D003060 ORTHO05D001716 2.1e-46 190.3 353 38.5
THA.LOC104802799 Tarenaya hassleriana HOM05D003060 ORTHO05D001716 2.1e-46 190.3 334 38.6
Sabra13G0021300 Salix brachista HOM05D003060 ORTHO05D001716 2.8e-46 189.9 282 43.3
Potri.013G018700 Populus trichocarpa HOM05D003060 ORTHO05D001716 3.7e-46 189.5 232 48.3
Sabra05G0032100 Salix brachista HOM05D003060 ORTHO05D001716 6.2e-46 188.7 286 42.3
Sed0010373 Sechium edule HOM05D003060 ORTHO05D001716 6.2e-46 188.7 359 36.8
FvH4_6g06310 Fragaria vesca HOM05D003060 ORTHO05D001716 1.4e-45 187.6 368 38.6
Sed0012843 Sechium edule HOM05D003060 ORTHO05D001716 1.4e-45 187.6 366 36.6
CARHR186170 Cardamine hirsuta HOM05D003060 ORTHO05D001716 1.8e-45 187.2 229 48.0
FAN14G2973 Fragaria x ananassa HOM05D003060 ORTHO05D001716 3.1e-45 186.4 306 41.5
Carub.0006s2494 Capsella rubella HOM05D003060 ORTHO05D001716 4.0e-45 186.0 214 49.1
Eucgr.H04503 Eucalyptus grandis HOM05D003060 ORTHO05D001716 9.0e-45 184.9 305 41.6
Sp2g20810 Schrenkiella parvula HOM05D003060 ORTHO05D001716 9.0e-45 184.9 293 42.3
AT5G27650 Arabidopsis thaliana HOM05D003060 ORTHO05D001716 1.5e-44 184.1 209 48.8
PGR031G3073 Punica granatum HOM05D003060 ORTHO05D001716 1.5e-44 184.1 306 39.5
AL6G39380 Arabidopsis lyrata HOM05D003060 ORTHO05D001716 3.4e-44 183.0 354 38.7
A09p05370 Brassica napus HOM05D003060 ORTHO05D001716 2.2e-43 180.3 211 48.3
C09p05850 Brassica napus HOM05D003060 ORTHO05D001716 2.2e-43 180.3 211 48.3
BolC9t53512H Brassica oleracea HOM05D003060 ORTHO05D001716 2.2e-43 180.3 211 48.3
BraA09t36175Z Brassica rapa HOM05D003060 ORTHO05D001716 2.2e-43 180.3 211 48.3
arahy.Tifrunner.gnm1.ann1.U2HTAJ Arachis hypogaea HOM05D003060 ORTHO05D001716 1.4e-42 177.6 300 40.3
Actinidia19783 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.9e-42 177.2 381 36.0
arahy.Tifrunner.gnm1.ann1.LGT5H6 Arachis hypogaea HOM05D003060 ORTHO05D001716 9.3e-42 174.9 300 40.3
Medtr7g113180 Medicago truncatula HOM05D003060 ORTHO05D001716 1.2e-41 174.5 209 48.3
TPR.G33216 Trifolium pratense HOM05D003060 ORTHO05D001716 1.2e-41 174.5 208 47.6
Ca_05807_v3 Cicer arietinum L. HOM05D003060 ORTHO05D001716 1.0e-40 171.4 208 47.1
Phvul.006G090600 Phaseolus vulgaris HOM05D003060 ORTHO05D001716 1.3e-40 171.0 208 47.1
Psat0s545g0040 Pisum sativum HOM05D003060 ORTHO05D001716 1.8e-40 170.6 208 46.6
Dinv30789 Davidia involucrata HOM05D003060 ORTHO05D001716 2.3e-40 170.2 215 44.7
Dinv40309 Davidia involucrata HOM05D003060 ORTHO05D001716 2.3e-40 170.2 319 39.2
Aa31LG5G15950 Aethionema arabicum HOM05D003060 ORTHO05D001716 1.1e-39 167.9 209 45.9
Phvul.006G090511 Phaseolus vulgaris HOM05D003060 ORTHO05D001716 3.3e-39 166.4 207 46.4
VMungo0540G1887 Vigna mungo HOM05D003060 ORTHO05D001716 4.3e-39 166.0 207 45.9
Lj1g0012568 Lotus japonicus HOM05D003060 ORTHO05D001716 7.4e-39 165.2 208 44.7
TAR636G0574 Trochodendron aralioides HOM05D003060 ORTHO05D001716 9.6e-39 164.9 389 34.7
Glyma.19G234300 Glycine max HOM05D003060 ORTHO05D001716 1.3e-38 164.5 208 45.7
GSVIVG01031118001 Vitis vinifera HOM05D003060 ORTHO05D001716 2.8e-38 163.3 397 33.5
Thhalv10019994m.g Eutrema salsugineum HOM05D003060 ORTHO05D001716 6.3e-38 162.2 336 34.2
TAR362G0619 Trochodendron aralioides HOM05D003060 ORTHO05D001716 6.3e-38 162.2 352 35.5
Lj9C129G1 Lonicera japonica HOM05D003060 ORTHO05D001716 1.4e-37 161.0 224 43.3
VMungo0540G0889 Vigna mungo HOM05D003060 ORTHO05D001716 1.4e-37 161.0 209 45.0
TAR633G1311 Trochodendron aralioides HOM05D003060 ORTHO05D001716 1.8e-37 160.6 189 45.5
Lalb_Chr15g0077301 Lupinus albus HOM05D003060 ORTHO05D001716 5.3e-37 159.1 233 41.6
Lalb_Chr18g0045701 Lupinus albus HOM05D003060 ORTHO05D001716 6.9e-37 158.7 208 42.8
SHI18114 Sapria himalayana HOM05D003060 ORTHO05D001716 1.2e-36 157.9 293 36.2
AL3G15990 Arabidopsis lyrata HOM05D003060 ORTHO05D001716 2.0e-36 157.1 209 43.5
Cc00_g10500 Coffea canephora HOM05D003060 ORTHO05D001716 2.6e-36 156.8 209 44.0
AT3G05430 Arabidopsis thaliana HOM05D003060 ORTHO05D001716 2.2e-35 153.7 335 35.8
BcaB04g19683 Brassica carinata HOM05D003060 ORTHO05D001716 2.2e-35 153.7 211 44.1
Actinidia19785 Actinidia chinensis HOM05D003060 ORTHO05D001716 2.9e-35 153.3 112 67.0
Rhsim05G0141600 Rhododendron simsii HOM05D003060 ORTHO05D001716 5.0e-35 152.5 364 33.0
Carub.0003s0471 Capsella rubella HOM05D003060 ORTHO05D001716 1.4e-34 151.0 209 43.1
Nn3g21411 Nelumbo nucifera HOM05D003060 ORTHO05D001716 1.4e-34 151.0 367 32.4
vmacro04969 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 1.9e-34 150.6 382 32.5
Glyma.20G235700 Glycine max HOM05D003060 ORTHO05D001716 3.2e-34 149.8 208 43.3
Glyma.10G152700 Glycine max HOM05D003060 ORTHO05D001716 4.2e-34 149.4 207 43.5
vmacro19622 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 9.3e-34 148.3 367 35.7
Rhsim07G0186300 Rhododendron simsii HOM05D003060 ORTHO05D001716 2.1e-33 147.1 328 33.5
AUR62005179 Chenopodium quinoa HOM05D003060 ORTHO05D001716 2.7e-33 146.7 112 61.6
MBI19_g13125_MAGBIO Magnolia biondii HOM05D003060 ORTHO05D001716 3.6e-33 146.4 186 44.6
Oeu012112.1 Olea europaea HOM05D003060 ORTHO05D001716 2.3e-32 143.7 209 39.7
EL10Ac4g09376 Beta vulgaris HOM05D003060 ORTHO05D001716 3.0e-32 143.3 397 31.5
SGA_v2.0_scaffold98G29313 Striga asiatica HOM05D003060 ORTHO05D001716 3.9e-32 142.9 209 40.2
AUR62000788 Chenopodium quinoa HOM05D003060 ORTHO05D001716 5.1e-32 142.5 280 35.0
Sc09g0003030 Simmondsia chinensis HOM05D003060 ORTHO05D001716 5.1e-32 142.5 112 58.9
MSTRG.27986 Avicennia marina HOM05D003060 ORTHO05D001716 8.7e-32 141.7 217 39.2
ECA132G0003 Erigeron canadensis HOM05D003060 ORTHO05D001716 8.7e-32 141.7 220 36.8
SGA_v2.0_scaffold80G25797 Striga asiatica HOM05D003060 ORTHO05D001716 1.9e-31 140.6 202 40.6
Actinidia24646 Actinidia chinensis HOM05D003060 ORTHO05D001716 3.3e-31 139.8 354 31.4
DCAR_003342 Daucus carota HOM05D003060 ORTHO05D001716 3.3e-31 139.8 112 61.6
HanXRQChr11g0339461 Helianthus annuus HOM05D003060 ORTHO05D001716 3.3e-31 139.8 216 38.0
ATR0706G064 Amborella trichopoda HOM05D003060 ORTHO05D001716 9.7e-31 138.3 111 57.7
DCAR_022153 Daucus carota HOM05D003060 ORTHO05D001716 9.7e-31 138.3 121 53.7
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 1.3e-30 137.9 196 38.8
CSS0041177 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 1.3e-30 137.9 384 30.7
SGA_v2.0_scaffold80G25802 Striga asiatica HOM05D003060 ORTHO05D001716 1.6e-30 137.5 209 39.7
Migut.N01988 Erythranthe guttata HOM05D003060 ORTHO05D001716 3.7e-30 136.3 211 39.8
Hund21701 Selenicereus undatus HOM05D003060 ORTHO05D001716 3.7e-30 136.3 112 55.4
Lj5g0001145 Lotus japonicus HOM05D003060 ORTHO05D001716 1.1e-29 134.8 112 59.8
Sc16g0008550 Simmondsia chinensis HOM05D003060 ORTHO05D001716 1.4e-29 134.4 112 57.1
MSTRG.20426 Avicennia marina HOM05D003060 ORTHO05D001716 2.4e-29 133.7 209 39.2
Ah.06g189640 Amaranthus hybridus HOM05D003060 ORTHO05D001716 3.1e-29 133.3 370 30.0
Oeu010912.1 Olea europaea HOM05D003060 ORTHO05D001716 5.3e-29 132.5 272 34.6
SalBow3G3371 Salvia bowleyana HOM05D003060 ORTHO05D001716 2.0e-28 130.6 212 37.7
Psat6g150120 Pisum sativum HOM05D003060 ORTHO05D001716 1.0e-27 128.3 112 55.4
Lsat_1_v5_gn_9_87441 Lactuca sativa HOM05D003060 ORTHO05D001716 1.7e-27 127.5 362 29.3
CDE02G1047 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 2.2e-27 127.1 112 55.4
Nitab4.5_0002344g0090 Nicotiana tabacum HOM05D003060 ORTHO05D001716 3.8e-27 126.3 354 31.6
unitig_749.g13558 Utricularia gibba HOM05D003060 ORTHO05D001716 5.0e-27 125.9 264 32.2
Lsat_1_v5_gn_9_87360 Lactuca sativa HOM05D003060 ORTHO05D001716 8.5e-27 125.2 111 55.0
SalBow7G2475 Salvia bowleyana HOM05D003060 ORTHO05D001716 8.5e-27 125.2 209 35.9
CDE08G1209 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 1.9e-26 124.0 112 53.6
CSS0018788 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 3.2e-26 123.2 112 52.7
PSO063G5863 Papaver somniferum HOM05D003060 ORTHO05D001716 4.2e-26 122.9 341 31.7
Sopen01g042920 Solanum pennellii HOM05D003060 ORTHO05D001716 4.2e-26 122.9 217 34.1
CAN.G1652.16 Capsicum annuum HOM05D003060 ORTHO05D001716 5.5e-26 122.5 212 35.8
unitig_899.g15592 Utricularia gibba HOM05D003060 ORTHO05D001716 5.5e-26 122.5 209 37.3
QL06p008666 Quercus lobata HOM05D003060 ORTHO05D001716 7.2e-26 122.1 111 50.5
Rhsim04G0220500 Rhododendron simsii HOM05D003060 ORTHO05D001716 7.2e-26 122.1 133 48.1
Nitab4.5_0004754g0020 Nicotiana tabacum HOM05D003060 ORTHO05D001716 1.2e-25 121.3 354 30.2
CSS0035849 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 2.7e-25 120.2 112 50.9
Haze_01221 Corylus avellana HOM05D003060 ORTHO05D001716 2.7e-25 120.2 109 53.2
PGSC0003DMG401024702 Solanum tuberosum HOM05D003060 ORTHO05D001716 3.6e-25 119.8 329 29.5
CSS0019912 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 6.1e-25 119.0 112 51.8
CSS0023784 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 6.1e-25 119.0 112 51.8
unitig_746.g26861 Utricularia gibba HOM05D003060 ORTHO05D001716 7.9e-25 118.6 228 35.1
CSS0034622 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 1.0e-24 118.2 112 50.9
PSO782G3442 Papaver somniferum HOM05D003060 ORTHO05D001716 1.0e-24 118.2 339 32.2
Peaxi162Scf00037g00924 Petunia axillaris HOM05D003060 ORTHO05D001716 2.3e-24 117.1 331 31.4
HanXRQChr14g0433331 Helianthus annuus HOM05D003060 ORTHO05D001716 3.0e-24 116.7 113 52.2
TWI09G1399 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 1.1e-23 114.8 112 54.5
Solyc01g099360.3 Solanum lycopersicum HOM05D003060 ORTHO05D001716 1.5e-23 114.4 353 28.6
Atru.chr4.2820 Acer truncatum HOM05D003060 ORTHO05D001716 2.0e-23 114.0 121 47.9
COL.COLO4_13891 Corchorus olitorius HOM05D003060 ORTHO05D001716 7.4e-23 112.1 121 47.1
vmacro08136 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 2.8e-22 110.2 112 49.1
HPP92_016933 Vanilla planifolia HOM05D003060 ORTHO05D001716 3.7e-22 109.8 111 51.4
Lsat_1_v5_gn_8_142521 Lactuca sativa HOM05D002100 ORTHO05D002310 4.8e-22 109.4 214 32.7
PSO063G5713 Papaver somniferum HOM05D003060 ORTHO05D001716 4.8e-22 109.4 112 49.1
PSO782G3873 Papaver somniferum HOM05D003060 ORTHO05D001716 4.8e-22 109.4 112 49.1
DCAR_001941 Daucus carota HOM05D003060 ORTHO05D001716 8.2e-22 108.6 112 47.3
TWI09G0082 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 8.2e-22 108.6 112 49.1
Peaxi162Scf00534g00111 Petunia axillaris HOM05D003060 ORTHO05D001716 1.1e-21 108.2 112 49.1
Lj6A674G26 Lonicera japonica HOM05D003060 ORTHO05D001716 1.4e-21 107.8 112 47.3
Lj9A123G17 Lonicera japonica HOM05D003060 ORTHO05D001716 1.2e-20 104.8 224 35.3
Lsat_1_v5_gn_3_100041 Lactuca sativa HOM05D003060 ORTHO05D001716 1.0e-19 101.7 190 35.8
Nitab4.5_0003972g0020 Nicotiana tabacum HOM05D003060 ORTHO05D001716 3.8e-19 99.8 107 50.5
CAN.G820.4 Capsicum annuum HOM05D003060 ORTHO05D001716 5.0e-19 99.4 106 50.0
Peaxi162Scf00534g00015 Petunia axillaris HOM05D003060 ORTHO05D001716 8.5e-19 98.6 112 47.3
Nitab4.5_0003749g0010 Nicotiana tabacum HOM05D003060 ORTHO05D001716 1.1e-18 98.2 112 49.1
SEGI_28746 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 2.5e-18 97.1 121 44.6
PGSC0003DMG400022663 Solanum tuberosum HOM05D003060 ORTHO05D001716 1.6e-17 94.4 107 48.6
Potri.008G209900 Populus trichocarpa HOM05D003060 ORTHO05D001716 3.6e-17 93.2 113 43.4
SEGI_40933 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 1.8e-16 90.9 110 40.9
Cc00_g10560 Coffea canephora HOM05D003060 ORTHO05D001716 2.3e-16 90.5 110 45.5
Lsat_1_v5_gn_3_26180 Lactuca sativa HOM05D003060 ORTHO05D001716 3.0e-16 90.1 121 41.3
Sopen01g028750 Solanum pennellii HOM05D003060 ORTHO05D001716 3.9e-16 89.7 107 46.7
Solyc01g067040.2 Solanum lycopersicum HOM05D003060 ORTHO05D001716 5.2e-16 89.4 107 46.7
AL5G27900 Arabidopsis lyrata HOM05D003060 ORTHO05D038563 7.7e-12 75.5 109 42.2
HanXRQChr17g0539161 Helianthus annuus HOM05D003060 ORTHO05D001716 1.0e-11 75.1 119 34.5
Ciclev10006926m.g Citrus clementina HOM05D003060 ORTHO05D001716 2.2e-11 73.9 121 37.2
Migut.N00095 Erythranthe guttata HOM05D003060 ORTHO05D001716 8.5e-11 72.0 116 37.9
Cpa.g.sc48.79 Carica papaya HOM05D003060 ORTHO05D001716 1.1e-10 71.6 127 41.7
Zm00001eb418070 Zea mays HOM05D003060 ORTHO05D001716 1.6e-09 67.8 110 35.5
CAN.G995.7 Capsicum annuum HOM05D003060 ORTHO05D001716 2.3e-08 63.9 111 36.0
HanXRQChr17g0538971 Helianthus annuus HOM05D003060 ORTHO05D001716 6.7e-08 62.4 96 36.5


User provided reference genes

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