Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1270 Acer truncatum HOM05D000135 ORTHO05D004276 7.6e-52 208.0 125 100.0
Sabra16G0043700 Salix brachista HOM05D000135 ORTHO05D004276 2.5e-26 123.2 121 57.0
Sabra16G0047100 Salix brachista HOM05D000135 ORTHO05D004276 2.5e-26 123.2 121 57.0
Potri.016G040900 Populus trichocarpa HOM05D000135 ORTHO05D004276 5.5e-26 122.1 121 64.5
RcHm_v2.0_Chr2g0124821 Rosa chinensis HOM05D000135 ORTHO05D004276 5.5e-26 122.1 130 52.3
Manes.08G056100 Manihot esculenta HOM05D000135 ORTHO05D004276 3.0e-24 116.3 121 54.5
Manes.09G009100 Manihot esculenta HOM05D000135 ORTHO05D004276 5.1e-24 115.5 128 53.9
MD14G1083200 Malus domestica HOM05D000135 ORTHO05D004276 6.7e-24 115.2 126 58.7
TWI74G1401 Tripterygium wilfordii HOM05D000135 ORTHO05D004276 2.0e-23 113.6 122 54.1
Medtr7g090450 Medicago truncatula HOM05D000135 ORTHO05D004276 3.3e-23 112.8 125 53.6
Potri.006G043700 Populus trichocarpa HOM05D000135 ORTHO05D004276 9.7e-23 111.3 119 57.1
MD12G1087300 Malus domestica HOM05D000135 ORTHO05D004276 2.8e-22 109.8 126 56.3
TWI53G0039 Tripterygium wilfordii HOM05D000135 ORTHO05D004276 2.8e-22 109.8 121 52.1
Prupe.7G047300 Prunus persica HOM05D000135 ORTHO05D004276 8.2e-22 108.2 131 59.5
Lalb_Chr20g0110231 Lupinus albus HOM05D000135 ORTHO05D004276 1.4e-21 107.5 123 51.2
Ciclev10005842m.g Citrus clementina HOM05D000135 ORTHO05D004276 3.1e-21 106.3 125 52.0
FvH4_6g25060 Fragaria vesca HOM05D000135 ORTHO05D004276 3.1e-21 106.3 130 52.3
FAN14G1675 Fragaria x ananassa HOM05D000135 ORTHO05D004276 3.1e-21 106.3 130 52.3
Gohir.A09G119400 Gossypium hirsutum HOM05D000135 ORTHO05D004276 4.1e-21 105.9 128 46.1
Gohir.D09G115600 Gossypium hirsutum HOM05D000135 ORTHO05D004276 4.1e-21 105.9 128 46.1
QL93p0294_0020 Quercus lobata HOM05D000135 ORTHO05D004276 4.1e-21 105.9 127 55.1
Thhalv10017207m.g Eutrema salsugineum HOM05D000135 ORTHO05D004276 5.3e-21 105.5 127 56.7
TWI77G0560 Tripterygium wilfordii HOM05D000135 ORTHO05D004276 5.3e-21 105.5 120 63.3
Psat3g077080 Pisum sativum HOM05D000135 ORTHO05D004276 6.9e-21 105.1 126 48.4
Thecc.05G142900 Theobroma cacao HOM05D000135 ORTHO05D004276 6.9e-21 105.1 126 54.8
COL.COLO4_32718 Corchorus olitorius HOM05D000135 ORTHO05D004276 9.1e-21 104.8 125 55.2
Ca_08413_v3 Cicer arietinum L. HOM05D000135 ORTHO05D004276 1.5e-20 104.0 128 50.0
Gorai.006G133800 Gossypium raimondii HOM05D000135 ORTHO05D004276 1.5e-20 104.0 128 46.1
FAN05G3917 Fragaria x ananassa HOM05D000135 ORTHO05D004276 2.0e-20 103.6 130 51.5
Cpa.g.sc5.191 Carica papaya HOM05D000135 ORTHO05D004276 3.4e-20 102.8 125 58.4
Lalb_Chr25g0286981 Lupinus albus HOM05D000135 ORTHO05D004276 3.4e-20 102.8 127 48.8
Duzib106G1597 Durio zibethinus HOM05D000135 ORTHO05D004276 4.5e-20 102.4 123 51.2
FAN02G3262 Fragaria x ananassa HOM05D000135 ORTHO05D004276 4.5e-20 102.4 130 51.5
QL07p005825 Quercus lobata HOM05D000135 ORTHO05D004276 4.5e-20 102.4 127 54.3
Sp4g23680 Schrenkiella parvula HOM05D000135 ORTHO05D004276 1.0e-19 101.3 125 50.4
CiPaw.09G043800 Carya illinoinensis HOM05D000135 ORTHO05D004276 5.0e-19 99.0 134 46.3
Dinv18481 Davidia involucrata HOM05D000135 ORTHO05D004276 8.5e-19 98.2 128 46.9
Duzib128G1351 Durio zibethinus HOM05D000135 ORTHO05D004276 8.5e-19 98.2 126 50.0
VMungo1383G0737 Vigna mungo HOM05D000135 ORTHO05D004276 1.1e-18 97.8 125 49.6
THA.LOC104803308 Tarenaya hassleriana HOM05D000135 ORTHO05D004276 2.5e-18 96.7 131 45.8
Sabra06G0029900 Salix brachista HOM05D000135 ORTHO05D004276 4.2e-18 95.9 103 50.5
Phvul.001G126700 Phaseolus vulgaris HOM05D000135 ORTHO05D004276 5.5e-18 95.5 125 48.8
Glyma.03G130800 Glycine max HOM05D000135 ORTHO05D004276 7.2e-18 95.1 127 48.8
AL4G39480 Arabidopsis lyrata HOM05D000135 ORTHO05D004276 9.4e-18 94.7 125 48.0
Glyma.19G132800 Glycine max HOM05D000135 ORTHO05D004276 9.4e-18 94.7 121 51.2
FAN09G0666 Fragaria x ananassa HOM05D000135 ORTHO05D004276 1.6e-17 94.0 130 49.2
Gohir.D01G183860 Gossypium hirsutum HOM05D000135 ORTHO05D004276 2.1e-17 93.6 124 42.7
Gorai.002G227200 Gossypium raimondii HOM05D000135 ORTHO05D004276 2.1e-17 93.6 124 42.7
AT2G41410 Arabidopsis thaliana HOM05D000135 ORTHO05D004276 2.7e-17 93.2 125 47.2
Gohir.A01G193500 Gossypium hirsutum HOM05D000135 ORTHO05D004276 1.4e-16 90.9 124 41.9
MD14G1069200 Malus domestica HOM05D000135 ORTHO05D004276 1.4e-16 90.9 126 48.4
Carub.0004s2370 Capsella rubella HOM05D000135 ORTHO05D004276 2.3e-16 90.1 125 46.4
CiPaw.10G037600 Carya illinoinensis HOM05D000135 ORTHO05D004276 2.3e-16 90.1 134 46.3
TAR633G2149 Trochodendron aralioides HOM05D000135 ORTHO05D004276 2.3e-16 90.1 120 54.2
Haze_19742 Corylus avellana HOM05D000135 ORTHO05D004276 3.9e-16 89.4 119 57.1
arahy.Tifrunner.gnm1.ann1.H7PRHK Arachis hypogaea HOM05D000135 ORTHO05D004276 1.1e-15 87.8 118 50.0
THA.LOC104816743 Tarenaya hassleriana HOM05D000135 ORTHO05D004276 1.1e-15 87.8 132 43.9
A04p31590 Brassica napus HOM05D000135 ORTHO05D004276 3.3e-15 86.3 123 47.2
BraA04t18616Z Brassica rapa HOM05D000135 ORTHO05D004276 3.3e-15 86.3 123 47.2
MSTRG.19826 Avicennia marina HOM05D000135 ORTHO05D004276 5.7e-15 85.5 125 42.4
CANSAT80G2036 Cannabis sativa HOM05D000135 ORTHO05D004276 7.4e-15 85.1 122 50.8
HanXRQChr10g0292811 Helianthus annuus HOM05D000135 ORTHO05D004276 7.4e-15 85.1 129 45.0
Lsat_1_v5_gn_9_29960 Lactuca sativa HOM05D000135 ORTHO05D004276 3.7e-14 82.8 129 42.6
BcaC02g12901 Brassica carinata HOM05D000135 ORTHO05D004276 4.8e-14 82.4 123 54.5
A05p38930 Brassica napus HOM05D000135 ORTHO05D004276 4.8e-14 82.4 120 45.0
BraA05t22684Z Brassica rapa HOM05D000135 ORTHO05D004276 4.8e-14 82.4 120 45.0
CARHR136520 Cardamine hirsuta HOM05D000135 ORTHO05D004276 4.8e-14 82.4 123 44.7
SalBow1G4185 Salvia bowleyana HOM05D000135 ORTHO05D004276 4.8e-14 82.4 123 50.4
SalBow1G4998 Salvia bowleyana HOM05D000135 ORTHO05D004276 4.8e-14 82.4 123 50.4
C04p69000 Brassica napus HOM05D000135 ORTHO05D004276 6.3e-14 82.0 129 45.7
BolC4t28400H Brassica oleracea HOM05D000135 ORTHO05D004276 6.3e-14 82.0 129 45.7
TAR089G0001 Trochodendron aralioides HOM05D000135 ORTHO05D004276 6.3e-14 82.0 123 42.3
C04p02690 Brassica napus HOM05D000135 ORTHO05D004276 8.2e-14 81.6 115 49.6
BolC4t21909H Brassica oleracea HOM05D000135 ORTHO05D004276 8.2e-14 81.6 115 49.6
DCAR_020540 Daucus carota HOM05D000135 ORTHO05D004276 1.4e-13 80.9 121 45.5
THA.LOC104816405 Tarenaya hassleriana HOM05D000135 ORTHO05D004276 1.4e-13 80.9 123 43.9
BcaC02g12781 Brassica carinata HOM05D000135 ORTHO05D004276 1.8e-13 80.5 115 48.7
Duzib093G1739 Durio zibethinus HOM05D000135 ORTHO05D004276 1.8e-13 80.5 105 41.9
A05p02260 Brassica napus HOM05D000135 ORTHO05D004276 3.1e-13 79.7 115 46.1
BraA05t19221Z Brassica rapa HOM05D000135 ORTHO05D004276 3.1e-13 79.7 115 46.1
Migut.J01687 Erythranthe guttata HOM05D000135 ORTHO05D004276 3.1e-13 79.7 127 48.0
THA.LOC104824421 Tarenaya hassleriana HOM05D000135 ORTHO05D004276 5.3e-13 79.0 119 41.2
C05p57950 Brassica napus HOM05D000135 ORTHO05D004276 7.0e-13 78.6 120 43.3
Lsat_1_v5_gn_5_159920 Lactuca sativa HOM05D000135 ORTHO05D004276 9.1e-13 78.2 131 56.5
Aa31LG5G11670 Aethionema arabicum HOM05D000135 ORTHO05D004276 1.2e-12 77.8 126 50.8
Oeu013035.1 Olea europaea HOM05D000135 ORTHO05D004276 1.2e-12 77.8 123 42.3
Nitab4.5_0000082g0370 Nicotiana tabacum HOM05D000135 ORTHO05D004276 1.6e-12 77.4 130 38.5
BcaNung05522 Brassica carinata HOM05D000135 ORTHO05D004276 2.0e-12 77.0 120 42.5
Nitab4.5_0012187g0010 Nicotiana tabacum HOM05D000135 ORTHO05D004276 2.0e-12 77.0 130 38.5
Cfa016734 Carpinus fangiana HOM05D000135 ORTHO05D004276 5.9e-12 75.5 119 49.6
Cc06_g18530 Coffea canephora HOM05D000135 ORTHO05D004276 5.9e-12 75.5 72 48.6
BolC5t34450H Brassica oleracea HOM05D000135 ORTHO05D004276 1.0e-11 74.7 120 42.5
Thhalv10021512m.g Eutrema salsugineum HOM05D000135 ORTHO05D004276 1.3e-11 74.3 120 42.5
Nn7g36497 Nelumbo nucifera HOM05D000135 ORTHO05D004276 1.7e-11 73.9 126 39.7
TAR369G0257 Trochodendron aralioides HOM05D000135 ORTHO05D004276 2.2e-11 73.6 121 46.3
Aa31LG3G2740 Aethionema arabicum HOM05D000135 ORTHO05D004276 2.9e-11 73.2 125 46.4
Hma1.2p1_0056F.1_g031770 Hydrangea macrophylla HOM05D000135 ORTHO05D004276 2.9e-11 73.2 132 40.2
Lj1g0022120 Lotus japonicus HOM05D000135 ORTHO05D004276 3.8e-11 72.8 128 44.5
Sp3g08470 Schrenkiella parvula HOM05D000135 ORTHO05D004276 6.5e-11 72.0 120 43.3
vmacro09033 Vaccinium macrocarpon HOM05D000135 ORTHO05D004276 6.5e-11 72.0 126 46.0
Carub.0003s0935 Capsella rubella HOM05D000135 ORTHO05D004276 1.5e-10 70.9 120 39.2
Solyc10g079420.1 Solanum lycopersicum HOM05D000135 ORTHO05D004276 1.5e-10 70.9 121 38.0
CARHR084670 Cardamine hirsuta HOM05D000135 ORTHO05D004276 1.9e-10 70.5 121 40.5
Dinv04147 Davidia involucrata HOM05D000135 ORTHO05D004276 1.9e-10 70.5 134 38.8
SalBow6G3572 Salvia bowleyana HOM05D000135 ORTHO05D004276 3.2e-10 69.7 123 38.2
SalBow6G5114 Salvia bowleyana HOM05D000135 ORTHO05D004276 3.2e-10 69.7 123 38.2
PGR031G1998 Punica granatum HOM05D000135 ORTHO05D004276 5.5e-10 68.9 120 42.5
Nitab4.5_0000677g0010 Nicotiana tabacum HOM05D000135 ORTHO05D004276 7.2e-10 68.6 122 40.2
AL3G21520 Arabidopsis lyrata HOM05D000135 ORTHO05D004276 9.4e-10 68.2 118 41.5
Rhsim04G0109300 Rhododendron simsii HOM05D000135 ORTHO05D004276 1.6e-09 67.4 125 43.2
Aqoxy2G00304 Aquilegia oxysepala HOM05D000135 ORTHO05D004276 2.1e-09 67.0 138 37.7
Nitab4.5_0003368g0020 Nicotiana tabacum HOM05D000135 ORTHO05D004276 2.7e-09 66.6 122 39.3
Rhsim03G0033400 Rhododendron simsii HOM05D000135 ORTHO05D004276 2.7e-09 66.6 116 48.3
HanXRQChr01g0008321 Helianthus annuus HOM05D000135 ORTHO05D004276 3.6e-09 66.2 124 39.5
TPR.G32748 Trifolium pratense HOM05D000135 ORTHO05D004276 4.7e-09 65.9 50 54.0
PGR142G4075 Punica granatum HOM05D000135 ORTHO05D004276 6.1e-09 65.5 120 45.0
Migut.K00111 Erythranthe guttata HOM05D000135 ORTHO05D004276 8.0e-09 65.1 116 37.9
AT3G10190 Arabidopsis thaliana HOM05D000135 ORTHO05D004276 1.4e-08 64.3 115 40.0
Sed0018510 Sechium edule HOM05D000135 ORTHO05D004276 1.8e-08 63.9 128 37.5
Sopen10g030390 Solanum pennellii HOM05D000135 ORTHO05D004276 2.3e-08 63.5 120 36.7
vmacro23056 Vaccinium macrocarpon HOM05D000135 ORTHO05D004276 2.3e-08 63.5 131 40.5
PSO541G3082 Papaver somniferum HOM05D000135 ORTHO05D004276 4.0e-08 62.8 130 35.4
PGSC0003DMG400008163 Solanum tuberosum HOM05D000135 ORTHO05D004276 5.2e-08 62.4 121 34.7
Eucgr.A02286 Eucalyptus grandis HOM05D000135 ORTHO05D004276 6.7e-08 62.0 126 47.6
Nitab4.5_0005031g0050 Nicotiana tabacum HOM05D000135 ORTHO05D004276 6.7e-08 62.0 137 38.7
PSO675G1959 Papaver somniferum HOM05D000135 ORTHO05D004276 6.7e-08 62.0 130 34.6
Actinidia09283 Actinidia chinensis HOM05D000135 ORTHO05D004276 8.8e-08 61.6 105 42.9
Solyc10g079755.1 Solanum lycopersicum HOM05D000135 ORTHO05D004276 1.1e-07 61.2 122 36.9
Sopen10g030060 Solanum pennellii HOM05D000135 ORTHO05D004276 1.5e-07 60.8 122 34.4
DCAR_016967 Daucus carota HOM05D000135 ORTHO05D004276 2.0e-07 60.5 120 35.8
PGSC0003DMG400029833 Solanum tuberosum HOM05D000135 ORTHO05D004276 2.6e-07 60.1 122 45.9
MSTRG.26139 Avicennia marina HOM05D000135 ORTHO05D004276 3.3e-07 59.7 127 37.8
Peaxi162Scf00816g00023 Petunia axillaris HOM05D000135 ORTHO05D004276 3.3e-07 59.7 111 36.0
PGSC0003DMG400010631 Solanum tuberosum HOM05D000135 ORTHO05D004276 3.3e-07 59.7 121 45.5
Oeu034679.1 Olea europaea HOM05D000135 ORTHO05D004276 7.5e-07 58.5 119 36.1
Sopen04g009340 Solanum pennellii HOM05D000135 ORTHO05D004276 9.7e-07 58.2 121 44.6
Carub.0006s0298 Capsella rubella HOM05D000135 ORTHO05D004276 1.3e-06 57.8 120 37.5
ClCG04G004190 Citrullus lanatus HOM05D000135 ORTHO05D004276 1.3e-06 57.8 118 39.8
HanXRQChr13g0395791 Helianthus annuus HOM05D000135 ORTHO05D004276 2.8e-06 56.6 64 51.6
Solyc04g018110.1 Solanum lycopersicum HOM05D000135 ORTHO05D004276 2.8e-06 56.6 121 43.8
CsaV3_3G040820 Cucumis sativus L. HOM05D000135 ORTHO05D004276 8.2e-06 55.1 125 34.4


User provided reference genes

Program Settings