Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1036 Acer truncatum HOM05D004075 ORTHO05D004538 7.8e-121 437.2 229 100.0
MD12G1066800 Malus domestica HOM05D004075 ORTHO05D004538 5.4e-45 185.3 224 49.1
Thecc.05G162200 Theobroma cacao HOM05D004075 ORTHO05D004538 5.4e-45 185.3 239 48.5
Cfa016858 Carpinus fangiana HOM05D004075 ORTHO05D004538 5.0e-43 178.7 245 46.5
COL.COLO4_28674 Corchorus olitorius HOM05D004075 ORTHO05D004538 5.0e-43 178.7 240 45.8
Prupe.7G067300 Prunus persica HOM05D004075 ORTHO05D004538 1.1e-42 177.6 231 47.6
CiPaw.10G031200 Carya illinoinensis HOM05D004075 ORTHO05D004538 2.1e-41 173.3 221 49.8
Duzib106G1725 Durio zibethinus HOM05D004075 ORTHO05D004538 2.1e-41 173.3 238 46.6
QL07p021680 Quercus lobata HOM05D004075 ORTHO05D004538 1.0e-40 171.0 241 46.1
Potri.006G054900 Populus trichocarpa HOM05D004075 ORTHO05D004538 1.2e-39 167.5 220 45.9
Duzib093G1674 Durio zibethinus HOM05D004075 ORTHO05D004538 3.4e-39 166.0 231 45.9
Manes.08G048400 Manihot esculenta HOM05D004075 ORTHO05D004538 2.9e-38 162.9 231 48.9
TAR633G2155 Trochodendron aralioides HOM05D004075 ORTHO05D004538 1.4e-37 160.6 241 41.9
CANSAT80G1662 Cannabis sativa HOM05D004075 ORTHO05D004538 2.7e-36 156.4 214 46.7
Glyma.03G139500 Glycine max HOM05D004075 ORTHO05D004538 4.6e-36 155.6 242 44.6
FAN09G1122 Fragaria x ananassa HOM05D004075 ORTHO05D004538 6.0e-36 155.2 239 44.8
Lj1g0004317 Lotus japonicus HOM05D004075 ORTHO05D004538 7.8e-36 154.8 252 43.7
Nn2g15469 Nelumbo nucifera HOM05D004075 ORTHO05D004538 2.3e-35 153.3 220 46.4
Lalb_Chr25g0287431 Lupinus albus HOM05D004075 ORTHO05D004538 3.9e-35 152.5 241 43.6
FAN02G0713 Fragaria x ananassa HOM05D004075 ORTHO05D004538 3.3e-34 149.4 243 41.6
Dinv09359 Davidia involucrata HOM05D004075 ORTHO05D004538 9.5e-34 147.9 221 43.9
TAR636G2153 Trochodendron aralioides HOM05D004075 ORTHO05D004538 2.8e-33 146.4 213 44.1
Medtr7g092270 Medicago truncatula HOM05D004075 ORTHO05D004538 3.6e-33 146.0 258 41.1
Psat0s1894g0080 Pisum sativum HOM05D004075 ORTHO05D004538 8.0e-33 144.8 236 43.2
Dinv18084 Davidia involucrata HOM05D004075 ORTHO05D004538 1.1e-32 144.4 239 41.0
Ca_08481_v3 Cicer arietinum L. HOM05D004075 ORTHO05D004538 2.3e-32 143.3 233 43.3
CSS0023689 Camellia sinensis var. sinensis HOM05D004075 ORTHO05D004538 6.8e-32 141.7 232 41.8
RcHm_v2.0_Chr3g0481111 Rosa chinensis HOM05D004075 ORTHO05D004538 1.2e-31 141.0 235 40.9
CSS0027632 Camellia sinensis var. sinensis HOM05D004075 ORTHO05D004538 2.6e-31 139.8 232 41.8
Hma1.2p1_0293F.1_g116200 Hydrangea macrophylla HOM05D004075 ORTHO05D004538 3.4e-31 139.4 200 40.0
Haze_19908 Corylus avellana HOM05D004075 ORTHO05D004538 1.3e-30 137.5 213 42.7
Haze_03220 Corylus avellana HOM05D004075 ORTHO05D004538 2.2e-30 136.7 217 41.5
QL04p006698 Quercus lobata HOM05D004075 ORTHO05D004538 2.9e-30 136.3 208 42.8
QL04p007893 Quercus lobata HOM05D004075 ORTHO05D004538 2.9e-30 136.3 208 42.8
Oeu063166.1 Olea europaea HOM05D004075 ORTHO05D004538 4.9e-30 135.6 201 42.3
Oeu063168.1 Olea europaea HOM05D004075 ORTHO05D004538 4.9e-30 135.6 201 42.3
Haze_02822 Corylus avellana HOM05D004075 ORTHO05D004538 2.4e-29 133.3 227 40.1
Dinv43449 Davidia involucrata HOM05D004075 ORTHO05D004538 2.4e-29 133.3 235 38.3
Phvul.001G136500 Phaseolus vulgaris HOM05D004075 ORTHO05D004538 2.4e-29 133.3 240 40.8
Actinidia20669 Actinidia chinensis HOM05D004075 ORTHO05D004538 5.4e-29 132.1 203 40.4
Rhsim07G0055100 Rhododendron simsii HOM05D004075 ORTHO05D004538 9.2e-29 131.3 207 41.5
MBI01_g18891_MAGBIO Magnolia biondii HOM05D004075 ORTHO05D004538 1.6e-28 130.6 256 37.5
PSO339G0483 Papaver somniferum HOM05D004075 ORTHO05D004538 1.6e-28 130.6 216 37.5
VMungo1383G2046 Vigna mungo HOM05D004075 ORTHO05D004538 2.1e-28 130.2 221 42.5
Cpa.g.sc245.12 Carica papaya HOM05D004075 ORTHO05D004538 6.0e-28 128.6 201 39.3
Lj9A631T51 Lonicera japonica HOM05D004075 ORTHO05D004538 7.8e-28 128.3 206 39.8
Cc02_g27890 Coffea canephora HOM05D004075 ORTHO05D004538 1.0e-27 127.9 206 40.8
TPR.G3891 Trifolium pratense HOM05D004075 ORTHO05D004538 1.3e-27 127.5 225 40.9
Oeu047570.1 Olea europaea HOM05D004075 ORTHO05D004538 1.7e-27 127.1 235 38.7
Peaxi162Scf00428g00317 Petunia axillaris HOM05D004075 ORTHO05D004538 1.7e-27 127.1 220 40.5
Sc11g0009230 Simmondsia chinensis HOM05D004075 ORTHO05D004538 1.7e-27 127.1 222 37.4
SGA_v2.0_scaffold5G02972 Striga asiatica HOM05D004075 ORTHO05D004538 1.7e-27 127.1 204 39.2
PSO384G3961 Papaver somniferum HOM05D004075 ORTHO05D004538 2.3e-27 126.7 222 37.4
Ciclev10031906m.g Citrus clementina HOM05D004075 ORTHO05D004538 3.0e-27 126.3 263 38.4
vmacro13660 Vaccinium macrocarpon HOM05D004075 ORTHO05D004538 5.1e-27 125.6 234 38.9
GSVIVG01032083001 Vitis vinifera HOM05D004075 ORTHO05D004538 6.6e-27 125.2 200 40.0
Sabra16G0056300 Salix brachista HOM05D004075 ORTHO05D004538 8.6e-27 124.8 100 61.0
DCAR_029668 Daucus carota HOM05D004075 ORTHO05D004538 1.1e-26 124.4 220 40.9
Rhsim01G0129700 Rhododendron simsii HOM05D004075 ORTHO05D004538 1.9e-26 123.6 229 36.2
CANSAT80G2751 Cannabis sativa HOM05D004075 ORTHO05D004538 2.5e-26 123.2 217 39.2
Migut.O00687 Erythranthe guttata HOM05D004075 ORTHO05D004538 4.3e-26 122.5 231 36.8
Actinidia21555 Actinidia chinensis HOM05D004075 ORTHO05D004538 2.8e-25 119.8 211 39.3
MSTRG.5020 Avicennia marina HOM05D004075 ORTHO05D004538 4.7e-25 119.0 214 38.3
Lsat_1_v5_gn_9_117060 Lactuca sativa HOM05D004075 ORTHO05D004538 4.7e-25 119.0 218 37.2
Nitab4.5_0002477g0020 Nicotiana tabacum HOM05D004075 ORTHO05D004538 4.7e-25 119.0 223 39.0
Thecc.01G411500 Theobroma cacao HOM05D004075 ORTHO05D004538 4.7e-25 119.0 218 38.5
Atru.chr11.2656 Acer truncatum HOM05D004075 ORTHO05D004538 6.2e-25 118.6 204 38.7
Potri.001G267600 Populus trichocarpa HOM05D004075 ORTHO05D004538 8.1e-25 118.2 204 36.8
vmacro21184 Vaccinium macrocarpon HOM05D004075 ORTHO05D004538 8.1e-25 118.2 233 36.1
Eucgr.J01269 Eucalyptus grandis HOM05D004075 ORTHO05D004538 1.8e-24 117.1 216 39.8
Nitab4.5_0000634g0160 Nicotiana tabacum HOM05D004075 ORTHO05D004538 4.0e-24 115.9 223 37.7
Potri.009G061900 Populus trichocarpa HOM05D004075 ORTHO05D004538 6.8e-24 115.2 204 36.3
Sabra09G0045700 Salix brachista HOM05D004075 ORTHO05D004538 6.8e-24 115.2 230 33.9
Gohir.A08G144800 Gossypium hirsutum HOM05D004075 ORTHO05D004538 8.9e-24 114.8 237 35.9
Gohir.D08G165800 Gossypium hirsutum HOM05D004075 ORTHO05D004538 8.9e-24 114.8 240 35.4
Lalb_Chr25g0283121 Lupinus albus HOM05D004075 ORTHO05D004538 8.9e-24 114.8 220 39.1
TWI73G1281 Tripterygium wilfordii HOM05D004075 ORTHO05D004538 8.9e-24 114.8 225 35.6
arahy.Tifrunner.gnm1.ann1.N8UE6G Arachis hypogaea HOM05D004075 ORTHO05D004538 1.5e-23 114.0 259 35.1
COL.COLO4_23930 Corchorus olitorius HOM05D004075 ORTHO05D004538 2.0e-23 113.6 209 37.3
Gorai.004G172900 Gossypium raimondii HOM05D004075 ORTHO05D004538 2.0e-23 113.6 240 35.0
SalBow8G1917 Salvia bowleyana HOM05D004075 ORTHO05D004538 5.8e-23 112.1 218 37.2
arahy.Tifrunner.gnm1.ann1.J4WSSI Arachis hypogaea HOM05D004075 ORTHO05D004538 7.6e-23 111.7 285 33.7
MSTRG.28073 Avicennia marina HOM05D004075 ORTHO05D004538 7.6e-23 111.7 214 36.9
SalBow6G5115 Salvia bowleyana HOM05D004075 ORTHO05D004538 1.3e-22 110.9 218 36.7
Sed0000159 Sechium edule HOM05D004075 ORTHO05D004538 2.9e-22 109.8 197 40.6
Prupe.2G012400 Prunus persica HOM05D004075 ORTHO05D004538 3.7e-22 109.4 199 37.7
Glyma.08G155000 Glycine max HOM05D004075 ORTHO05D004538 4.9e-22 109.0 218 36.7
PGSC0003DMG400006871 Solanum tuberosum HOM05D004075 ORTHO05D004538 4.9e-22 109.0 221 35.3
CAN.G1820.5 Capsicum annuum HOM05D004075 ORTHO05D004538 6.4e-22 108.6 198 38.4
TWI53G1782 Tripterygium wilfordii HOM05D004075 ORTHO05D004538 6.4e-22 108.6 224 35.3
HanXRQChr03g0065861 Helianthus annuus HOM05D004075 ORTHO05D004538 8.3e-22 108.2 243 35.8
Solyc01g087080.4 Solanum lycopersicum HOM05D004075 ORTHO05D004538 8.3e-22 108.2 222 35.6
MD02G1313000 Malus domestica HOM05D004075 ORTHO05D004538 1.1e-21 107.8 200 37.5
Glyma.15G273700 Glycine max HOM05D004075 ORTHO05D004538 2.4e-21 106.7 205 38.0
Sopen01g034160 Solanum pennellii HOM05D004075 ORTHO05D004538 2.4e-21 106.7 224 36.2
Manes.07G005500 Manihot esculenta HOM05D004075 ORTHO05D004538 3.2e-21 106.3 204 37.3
Lj3g0017759 Lotus japonicus HOM05D004075 ORTHO05D004538 4.1e-21 105.9 262 34.0
PGR031G2189 Punica granatum HOM05D004075 ORTHO05D004538 4.1e-21 105.9 209 36.8
VMungo1080G0731 Vigna mungo HOM05D004075 ORTHO05D004538 7.1e-21 105.1 222 35.6
ClCG09G004200 Citrullus lanatus HOM05D004075 ORTHO05D004538 9.2e-21 104.8 191 37.2
RcHm_v2.0_Chr1g0315881 Rosa chinensis HOM05D004075 ORTHO05D004538 9.2e-21 104.8 222 33.8
Phvul.005G020800 Phaseolus vulgaris HOM05D004075 ORTHO05D004538 1.2e-20 104.4 204 36.3
ATR0605G345 Amborella trichopoda HOM05D004075 ORTHO05D004538 3.5e-20 102.8 202 37.6
CsaV3_7G031100 Cucumis sativus L. HOM05D004075 ORTHO05D004538 3.5e-20 102.8 230 33.5
MD07G1009400 Malus domestica HOM05D004075 ORTHO05D004538 3.5e-20 102.8 194 36.6
Psat5g204000 Pisum sativum HOM05D004075 ORTHO05D004538 3.5e-20 102.8 203 36.0
MELO3C023547.2 Cucumis melo HOM05D004075 ORTHO05D004538 4.6e-20 102.4 205 35.6
Lsat_1_v5_gn_1_107340 Lactuca sativa HOM05D004075 ORTHO05D004538 4.6e-20 102.4 217 33.6
ECA240G2351 Erigeron canadensis HOM05D004075 ORTHO05D004538 7.8e-20 101.7 202 34.7
Ca_26459_v3 Cicer arietinum L. HOM05D004075 ORTHO05D004538 1.0e-19 101.3 238 34.0
FAN01G1840 Fragaria x ananassa HOM05D004075 ORTHO05D004538 1.3e-19 100.9 217 34.6
ECA248G1140 Erigeron canadensis HOM05D004075 ORTHO05D004538 1.7e-19 100.5 203 38.4
Thhalv10010636m.g Eutrema salsugineum HOM05D004075 ORTHO05D004538 2.3e-19 100.1 205 35.1
Medtr3g028600 Medicago truncatula HOM05D004075 ORTHO05D004538 2.3e-19 100.1 200 36.0
FvH4_7g00980 Fragaria vesca HOM05D004075 ORTHO05D004538 3.0e-19 99.8 217 34.6
FAN03G2231 Fragaria x ananassa HOM05D004075 ORTHO05D004538 3.0e-19 99.8 217 34.6
FAN06G1907 Fragaria x ananassa HOM05D004075 ORTHO05D004538 3.0e-19 99.8 217 34.6
FAN10G0771 Fragaria x ananassa HOM05D004075 ORTHO05D004538 3.0e-19 99.8 217 34.6
unitig_578.g16697 Utricularia gibba HOM05D004075 ORTHO05D004538 3.9e-19 99.4 226 32.7
TPR.G32989 Trifolium pratense HOM05D004075 ORTHO05D004538 6.6e-19 98.6 201 34.3
HPP92_020393 Vanilla planifolia HOM05D004075 ORTHO05D004538 1.5e-18 97.4 210 33.3
EL10Ac2g04319 Beta vulgaris HOM05D004075 ORTHO05D004538 3.3e-18 96.3 226 33.6
Manes.10G143700 Manihot esculenta HOM05D004075 ORTHO05D004538 4.3e-18 95.9 204 33.8
Peaxi162Scf00337g00818 Petunia axillaris HOM05D004075 ORTHO05D004538 5.6e-18 95.5 204 37.7
THA.LOC104826677 Tarenaya hassleriana HOM05D004075 ORTHO05D004538 7.3e-18 95.1 221 29.9
HanXRQChr13g0420751 Helianthus annuus HOM05D004075 ORTHO05D004538 1.2e-17 94.4 234 33.3
CARHR161820 Cardamine hirsuta HOM05D004075 ORTHO05D004538 2.8e-17 93.2 205 34.1
AL5G32670 Arabidopsis lyrata HOM05D004075 ORTHO05D004538 3.6e-17 92.8 204 33.3
Carub.0005s1844 Capsella rubella HOM05D004075 ORTHO05D004538 6.2e-17 92.0 203 32.5
THA.LOC104817133 Tarenaya hassleriana HOM05D004075 ORTHO05D004538 1.1e-16 91.3 193 36.3
THA.LOC104819075 Tarenaya hassleriana HOM05D004075 ORTHO05D004538 1.1e-16 91.3 193 36.3
Zm00001eb005640 Zea mays HOM05D004075 ORTHO05D004538 1.4e-16 90.9 222 32.4
AT3G52110 Arabidopsis thaliana HOM05D004075 ORTHO05D004538 1.8e-16 90.5 204 32.4
BcaB01g00440 Brassica carinata HOM05D004075 ORTHO05D004538 4.0e-16 89.4 205 32.2
Aa31LG10G7190 Aethionema arabicum HOM05D004075 ORTHO05D004538 5.2e-16 89.0 204 31.4
Aqoxy2G00118 Aquilegia oxysepala HOM05D004075 ORTHO05D004538 6.8e-16 88.6 232 34.1
Zm00001eb402070 Zea mays HOM05D004075 ORTHO05D004538 6.8e-16 88.6 234 29.9
A04p07270 Brassica napus HOM05D004075 ORTHO05D004538 8.9e-16 88.2 198 33.8
BolC8t50355H Brassica oleracea HOM05D004075 ORTHO05D004538 8.9e-16 88.2 207 30.4
BraA04t16422Z Brassica rapa HOM05D004075 ORTHO05D004538 8.9e-16 88.2 198 33.8
Sp5g10180 Schrenkiella parvula HOM05D004075 ORTHO05D004538 8.9e-16 88.2 203 32.0
BcaNung06093 Brassica carinata HOM05D004075 ORTHO05D004538 1.5e-15 87.4 207 30.4
C08p27380 Brassica napus HOM05D004075 ORTHO05D004538 1.5e-15 87.4 207 30.4
A09p45170 Brassica napus HOM05D004075 ORTHO05D004538 2.0e-15 87.0 207 31.4
BraA09t39980Z Brassica rapa HOM05D004075 ORTHO05D004538 2.0e-15 87.0 207 31.4
Os03g0174200 Oryza sativa ssp. japonica HOM05D004075 ORTHO05D004538 2.0e-15 87.0 241 30.3
CDE10G0025 Ceratophyllum demersum HOM05D004075 ORTHO05D004538 7.6e-15 85.1 218 31.2
BcaB02g08587 Brassica carinata HOM05D004075 ORTHO05D004538 1.3e-14 84.3 234 31.2
Duzib268G0178 Durio zibethinus HOM05D004075 ORTHO05D004538 2.2e-14 83.6 237 33.8
C04p40860 Brassica napus HOM05D004075 ORTHO05D004538 2.4e-13 80.1 236 29.7
BcaC02g09281 Brassica carinata HOM05D004075 ORTHO05D004538 5.4e-13 79.0 244 29.9
BolC4t25672H Brassica oleracea HOM05D004075 ORTHO05D004538 5.4e-13 79.0 244 29.9
Ah.10g038860 Amaranthus hybridus HOM05D004075 ORTHO05D004538 7.1e-13 78.6 194 30.9
SEGI_02901 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 7.8e-12 75.1 126 34.1
SEGI_25355 Sequoiadendron giganteum HOM05D000006 ORTHO05D004538 7.8e-12 75.1 126 34.1
SEGI_33290 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 1.0e-11 74.7 127 34.6
SEGI_00378 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 2.3e-11 73.6 126 34.9
SEGI_06755 Sequoiadendron giganteum HOM05D004075 ORTHO05D004538 7.6e-07 58.5 135 29.6
Dinv00534 Davidia involucrata HOM05D004075 ORTHO05D004538 9.9e-07 58.2 96 36.5


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