Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1009 Acer truncatum HOM05D008758 ORTHO05D009412 6.5e-26 120.2 70 100.0
Atru.chr1.977 Acer truncatum HOM05D008758 ORTHO05D009412 6.5e-26 120.2 70 100.0
Atru.chr1.1012 Acer truncatum HOM05D008758 ORTHO05D009412 4.7e-24 114.0 70 92.9
Atru.chr1.980 Acer truncatum HOM05D008758 ORTHO05D009412 2.3e-23 111.7 70 91.4
Atru.chr1.1011 Acer truncatum HOM05D008758 ORTHO05D009412 3.9e-23 110.9 70 91.4
Atru.chr1.1014 Acer truncatum HOM05D008758 ORTHO05D009412 2.0e-22 108.6 65 95.4
Atru.chr1.1010 Acer truncatum HOM05D008758 ORTHO05D009412 3.3e-22 107.8 70 88.6
Atru.chr1.978 Acer truncatum HOM05D008758 ORTHO05D009412 9.7e-22 106.3 70 87.1
Atru.chr1.984 Acer truncatum HOM05D008758 ORTHO05D009412 5.2e-15 84.0 50 94.0
TAR633G0918 Trochodendron aralioides HOM05D008758 ORTHO05D009412 5.3e-12 73.9 70 58.6
TAR376G0113 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.0e-11 72.0 70 58.6
Potri.016G052200 Populus trichocarpa HOM05D008758 ORTHO05D009412 1.0e-10 69.7 70 62.9
TAR376G0381 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.9e-10 68.2 70 55.7
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 5.0e-10 67.4 70 55.7
TAR376G0475 Trochodendron aralioides HOM05D008758 ORTHO05D009412 5.0e-10 67.4 70 55.7
TAR291G0003 Trochodendron aralioides HOM05D008758 ORTHO05D009412 6.5e-10 67.0 70 57.1
TAR375G0878 Trochodendron aralioides HOM05D008758 ORTHO05D009412 6.5e-10 67.0 70 57.1
TAR376G0225 Trochodendron aralioides HOM05D008758 ORTHO05D009412 6.5e-10 67.0 70 54.3
TAR291G0001 Trochodendron aralioides HOM05D008758 ORTHO05D009412 8.5e-10 66.6 70 57.1
TAR375G0339 Trochodendron aralioides HOM05D008758 ORTHO05D009412 8.5e-10 66.6 70 57.1
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 3.2e-09 64.7 71 57.7
Nn2g15429 Nelumbo nucifera HOM05D008758 ORTHO05D009412 4.7e-08 60.8 72 55.6
EL10Ac3g07002 Beta vulgaris HOM05D024890 ORTHO05D026518 8.0e-08 60.1 70 55.7
Manes.07G005200 Manihot esculenta HOM05D012217 ORTHO05D009412 4.0e-07 57.8 67 52.2
Potri.006G055500 Populus trichocarpa HOM05D010551 ORTHO05D012668 5.2e-07 57.4 68 52.9
Potri.006G056000 Populus trichocarpa HOM05D008758 ORTHO05D009412 5.2e-07 57.4 70 55.7
PGSC0003DMG400008180 Solanum tuberosum HOM05D008319 ORTHO05D009412 8.8e-07 56.6 70 54.3
Gohir.D01G122000 Gossypium hirsutum HOM05D014458 ORTHO05D016968 1.5e-06 55.8 70 52.9
Sc11g0009250 Simmondsia chinensis HOM05D008758 ORTHO05D009412 2.0e-06 55.5 70 51.4
Manes.07G004700 Manihot esculenta HOM05D012217 ORTHO05D009412 3.3e-06 54.7 66 51.5
Nitab4.5_0006284g0040 Nicotiana tabacum HOM05D008319 ORTHO05D009412 3.3e-06 54.7 70 52.9
Potri.016G052400 Populus trichocarpa HOM05D008758 ORTHO05D009412 3.3e-06 54.7 57 57.9
Thecc.05G163900 Theobroma cacao HOM05D010551 ORTHO05D012668 3.3e-06 54.7 66 51.5
Sc25g0005200 Simmondsia chinensis HOM05D008758 ORTHO05D009412 4.4e-06 54.3 64 46.9
QL07p021867 Quercus lobata HOM05D008758 ORTHO05D009412 5.7e-06 53.9 68 48.5
Thecc.05G163500 Theobroma cacao HOM05D010551 ORTHO05D012668 5.7e-06 53.9 68 50.0
COL.COLO4_28691 Corchorus olitorius HOM05D010551 ORTHO05D012668 7.5e-06 53.5 66 50.0
Nn7g36171 Nelumbo nucifera HOM05D008758 ORTHO05D009412 7.5e-06 53.5 63 50.8


User provided reference genes

Program Settings