Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 2.9e-97 358.6 188 100.0
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 5.5e-72 274.6 189 79.9
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 1.8e-59 233.0 186 67.7
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 2.0e-58 229.6 188 63.3
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 7.8e-58 227.6 186 64.5
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 5.0e-57 224.9 189 61.9
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 8.6e-57 224.2 186 62.9
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 4.3e-56 221.9 186 63.4
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 9.5e-56 220.7 189 60.3
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 8.0e-55 217.6 185 61.1
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 4.0e-54 215.3 185 62.2
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 3.4e-53 212.2 187 59.4
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 5.7e-53 211.5 182 63.7
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 1.1e-51 207.2 186 59.1
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 1.1e-51 207.2 187 58.8
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 3.2e-51 205.7 189 59.3
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 7.0e-51 204.5 189 59.3
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 2.0e-50 203.0 186 57.5
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 2.7e-50 202.6 190 55.3
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 7.8e-50 201.1 189 56.6
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.3e-49 199.5 189 56.1
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.0e-49 199.1 189 56.6
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 3.9e-49 198.7 189 56.6
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 8.6e-49 197.6 189 54.0
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 2.5e-48 196.1 188 58.0
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 3.3e-48 195.7 190 56.3
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 5.6e-48 194.9 186 57.5
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 1.6e-47 193.4 189 54.0
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.1e-46 190.7 188 56.4
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.8e-46 189.9 189 53.4
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.3e-46 189.5 189 54.0
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 4.0e-46 188.7 188 53.2
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 5.2e-46 188.3 186 53.2
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 5.2e-46 188.3 188 53.7
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 1.2e-45 187.2 188 49.5
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 2.0e-45 186.4 188 51.1
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 3.4e-45 185.7 188 52.1
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 3.4e-45 185.7 191 54.5
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 7.5e-45 184.5 188 51.6
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 1.3e-44 183.7 191 51.8
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 1.3e-44 183.7 188 49.5
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 2.9e-44 182.6 188 51.6
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 2.9e-44 182.6 188 48.9
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 3.7e-44 182.2 210 49.5
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 4.9e-44 181.8 189 51.3
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 6.4e-44 181.4 188 53.7
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 6.4e-44 181.4 188 53.7
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 6.4e-44 181.4 188 48.9
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 1.1e-43 180.6 166 57.8
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 1.1e-43 180.6 193 49.7
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 1.4e-43 180.3 185 50.8
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 4.1e-43 178.7 188 54.3
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 4.1e-43 178.7 188 54.3
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 5.4e-43 178.3 188 52.1
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 5.4e-43 178.3 189 51.3
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 1.6e-42 176.8 188 47.3
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 2.0e-42 176.4 189 51.9
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 3.5e-42 175.6 188 53.7
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 6.0e-42 174.9 184 48.4
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 1.3e-41 173.7 193 47.7
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 1.1e-40 170.6 185 53.5
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 3.3e-40 169.1 186 50.5
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 7.3e-40 167.9 184 49.5
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 1.6e-39 166.8 185 51.4
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 1.6e-39 166.8 184 49.5
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.8e-39 166.0 189 53.4
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 4.7e-39 165.2 188 46.3
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 1.1e-38 164.1 190 46.8
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.8e-38 163.3 184 52.2
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 3.1e-38 162.5 188 48.4
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.2e-37 160.6 187 44.4
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 5.8e-37 158.3 187 46.5
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.3e-36 157.1 176 50.6
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 2.2e-36 156.4 187 48.7
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.4e-35 153.7 184 46.2
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 5.4e-35 151.8 185 46.5
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.6e-34 150.2 175 48.0
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 5.1e-33 145.2 117 64.1
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.1e-32 144.1 233 36.9
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 1.1e-32 144.1 191 46.6
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 2.8e-31 139.4 191 44.5
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.6e-31 139.0 110 65.5
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 3.6e-31 139.0 191 44.5
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 4.7e-31 138.7 191 44.0
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 8.1e-31 137.9 191 44.5
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.1e-30 137.5 163 47.9
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 2.0e-29 133.3 120 55.8
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 2.2e-28 129.8 182 41.8
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 3.2e-27 125.9 183 40.4
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 2.1e-26 123.2 190 41.6
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 3.5e-26 122.5 129 53.5
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 3.0e-25 119.4 118 55.9
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 5.1e-25 118.6 150 44.7
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 6.2e-23 111.7 114 48.2
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 2.1e-18 96.7 93 52.7
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.1e-16 90.9 186 35.5
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.9e-16 90.1 184 34.2
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 8.1e-15 84.7 181 32.6
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.0e-09 67.8 63 54.0
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 8.7e-09 64.7 73 42.5
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 2.1e-07 60.1 90 40.0
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 5.3e-06 55.5 89 36.0


User provided reference genes

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