Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.5e-219 765.0 355 100.0
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 3.8e-215 751.1 355 98.3
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 1.1e-190 669.8 355 85.4
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 4.2e-182 641.3 355 81.4
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 6.1e-181 637.5 355 80.6
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.0e-181 637.1 355 80.0
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 5.2e-180 634.4 355 79.4
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 7.5e-179 630.6 356 79.8
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.5e-179 630.6 355 78.3
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 7.5e-179 630.6 355 79.2
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 1.3e-178 629.8 355 79.7
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.7e-178 629.4 355 79.7
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 1.7e-178 629.4 355 78.0
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 2.8e-178 628.6 355 79.7
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 3.7e-178 628.2 355 78.0
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.9e-178 627.9 355 78.0
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.3e-178 627.5 355 78.9
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 6.3e-178 627.5 355 78.6
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 6.3e-178 627.5 355 79.4
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 8.3e-178 627.1 355 78.3
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.4e-177 625.5 355 78.0
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.4e-177 625.5 355 77.7
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.4e-177 625.5 355 77.5
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.4e-177 624.4 355 78.3
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 5.4e-177 624.4 355 77.2
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 9.2e-177 623.6 354 77.7
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 1.2e-176 623.2 355 77.2
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.6e-176 622.9 355 77.2
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 4.5e-176 621.3 355 79.2
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.7e-175 619.4 355 77.2
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 2.3e-175 619.0 355 76.9
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.9e-175 618.6 355 78.0
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 2.9e-175 618.6 355 78.3
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 3.8e-175 618.2 355 77.5
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 1.1e-174 616.7 355 77.7
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.9e-174 615.9 355 77.5
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.9e-174 615.9 355 77.5
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.9e-174 615.9 355 77.5
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 1.9e-174 615.9 355 78.9
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 2.5e-174 615.5 355 77.7
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 3.3e-174 615.1 355 77.2
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 3.3e-174 615.1 355 77.2
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 4.3e-174 614.8 355 76.3
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.6e-174 614.4 355 76.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 2.1e-173 612.5 355 76.3
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 3.6e-173 611.7 355 76.9
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 6.1e-173 610.9 355 76.1
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 1.4e-172 609.8 355 77.2
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.8e-172 609.4 355 77.2
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.8e-172 609.4 355 78.0
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.3e-172 609.0 354 76.0
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 2.3e-172 609.0 355 76.6
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 4.0e-172 608.2 355 77.5
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 4.0e-172 608.2 355 76.1
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 5.2e-172 607.8 355 76.3
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.2e-172 607.8 355 77.5
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 6.8e-172 607.4 355 78.6
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 8.9e-172 607.1 355 77.2
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 3.4e-171 605.1 355 74.9
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.5e-171 604.0 355 76.1
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 7.5e-171 604.0 352 76.1
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.3e-170 603.2 355 75.8
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 2.9e-170 602.1 352 75.9
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 4.9e-170 601.3 355 74.6
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 4.9e-170 601.3 352 75.9
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 1.4e-169 599.7 351 75.5
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 5.4e-169 597.8 355 74.6
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 7.0e-169 597.4 355 75.2
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 7.0e-169 597.4 345 76.8
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 9.2e-169 597.0 355 74.4
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.2e-168 596.7 355 75.5
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 3.5e-168 595.1 355 75.2
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 6.0e-168 594.3 351 74.6
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.3e-167 592.4 355 74.1
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 3.0e-167 592.0 355 74.6
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.9e-166 589.3 355 74.4
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 1.9e-166 589.3 355 73.5
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.5e-166 589.0 355 74.1
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 3.3e-166 588.6 355 74.4
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.3e-166 588.6 355 75.8
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 4.3e-166 588.2 351 74.4
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 9.5e-166 587.0 354 74.6
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 2.1e-165 585.9 351 74.4
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 2.8e-165 585.5 351 73.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 3.6e-165 585.1 351 73.5
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 8.0e-165 583.9 355 73.5
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.4e-164 583.2 334 77.5
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 3.1e-164 582.0 355 72.7
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 5.2e-164 581.3 351 73.5
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 6.8e-164 580.9 351 73.5
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.2e-163 580.1 351 73.5
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.0e-163 579.3 355 73.2
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 5.8e-163 577.8 351 73.2
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 5.8e-163 577.8 351 73.2
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 7.5e-163 577.4 355 73.2
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 2.9e-162 575.5 355 73.2
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.4e-161 572.4 349 72.2
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 5.4e-161 571.2 334 74.9
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 2.7e-160 568.9 355 71.0
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 6.0e-160 567.8 355 72.1
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.3e-159 566.6 354 70.9
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 2.3e-159 565.8 354 71.5
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 8.6e-159 563.9 354 70.9
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 2.5e-158 562.4 355 70.4
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.6e-157 559.7 356 70.8
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.8e-156 556.2 355 69.3
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 9.9e-155 550.4 355 68.7
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.7e-154 549.7 356 69.7
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 6.4e-154 547.7 334 74.0
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.1e-152 542.7 355 71.0
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.1e-149 532.7 359 67.4
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 1.9e-142 509.6 281 78.3
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.4e-140 503.4 281 78.6
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 5.8e-139 498.0 357 64.1
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 3.5e-136 488.8 355 63.9
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.0e-135 485.7 357 61.1
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.7e-130 469.9 349 60.2
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.8e-127 459.9 356 60.1
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 5.3e-116 421.8 322 63.4
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.9e-98 362.8 209 75.6
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 3.2e-97 359.4 215 73.5
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.4e-95 354.0 209 74.6
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.1e-94 350.9 356 49.4
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 2.6e-91 339.7 286 54.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 8.0e-64 248.4 191 64.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 9.5e-57 224.9 333 42.0
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.7e-29 134.4 93 60.2
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.1e-25 121.7 101 59.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.5e-25 121.3 80 65.0
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 8.1e-16 89.0 115 40.0
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 3.4e-06 57.0 74 44.6


User provided reference genes

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