Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 1.7e-260 902.1 451 100.0
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 3.4e-168 595.5 507 63.3
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 3.4e-168 595.5 477 66.2
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 9.9e-168 594.0 512 62.9
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 4.9e-167 591.7 508 63.0
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 4.9e-167 591.7 507 61.5
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 1.9e-166 589.7 541 58.0
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 4.1e-166 588.6 506 62.1
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 4.6e-165 585.1 512 62.3
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 5.1e-164 581.6 509 61.3
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 9.6e-163 577.4 509 60.9
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 2.8e-162 575.9 505 61.6
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 1.1e-161 573.9 506 60.1
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 1.4e-161 573.5 504 60.3
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 2.4e-161 572.8 504 60.9
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 1.5e-160 570.1 507 59.8
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 5.4e-158 561.6 545 57.1
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 1.2e-157 560.5 506 58.3
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 7.8e-157 557.8 491 60.1
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 1.7e-156 556.6 504 59.9
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 5.1e-156 555.1 470 62.1
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 6.6e-156 554.7 520 57.5
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 3.6e-154 548.9 506 56.9
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 1.4e-153 547.0 503 57.1
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 1.8e-153 546.6 501 56.5
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 2.4e-153 546.2 506 57.3
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 3.1e-153 545.8 506 57.1
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 2.0e-152 543.1 506 57.3
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 4.5e-152 542.0 503 56.7
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 5.8e-152 541.6 501 56.1
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 5.8e-152 541.6 505 57.4
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 5.8e-152 541.6 506 56.9
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 7.6e-152 541.2 506 56.9
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 1.3e-151 540.4 503 56.5
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 1.7e-151 540.0 501 55.3
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 2.2e-151 539.7 501 56.5
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 2.9e-151 539.3 501 55.9
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 2.9e-151 539.3 501 55.7
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.8e-151 538.9 516 56.2
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 4.9e-151 538.5 506 56.7
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 8.4e-151 537.7 504 56.9
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 8.4e-151 537.7 501 55.7
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.2e-150 535.8 519 56.1
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 6.0e-149 531.6 506 55.7
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 2.3e-148 529.6 504 56.0
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 3.9e-148 528.9 507 57.6
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 8.7e-148 527.7 502 56.0
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 3.3e-147 525.8 507 55.6
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 5.6e-147 525.0 504 55.6
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 7.4e-147 524.6 504 55.0
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 1.3e-146 523.9 504 55.4
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 1.6e-146 523.5 505 56.0
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 2.8e-146 522.7 506 56.1
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 1.1e-145 520.8 504 54.6
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 1.8e-145 520.0 504 55.4
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 9.0e-145 517.7 486 56.8
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 2.6e-144 516.2 502 55.2
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 3.4e-144 515.8 513 53.2
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 4.5e-144 515.4 487 55.4
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 4.5e-144 515.4 456 58.6
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 7.6e-144 514.6 504 55.6
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 9.9e-144 514.2 504 55.0
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 1.7e-143 513.5 506 54.9
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 2.2e-143 513.1 528 54.0
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 4.9e-143 511.9 503 54.3
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 1.1e-142 510.8 442 61.3
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 4.3e-139 498.8 509 52.7
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 5.6e-139 498.4 503 54.3
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 9.6e-139 497.7 490 54.9
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 3.7e-138 495.7 460 58.5
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 8.2e-138 494.6 486 54.5
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 9.0e-137 491.1 532 50.8
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 3.4e-136 489.2 542 50.6
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 7.4e-131 471.5 493 53.1
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 3.1e-129 466.1 508 50.4
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 1.5e-128 463.8 506 50.0
Manes.16G135400 Manihot esculenta HOM05D007251 ORTHO05D009266 1.0e-124 451.1 338 67.8
CsaV3_3G047120 Cucumis sativus L. HOM05D007251 ORTHO05D009266 8.2e-122 441.4 341 64.5
Cfa013277 Carpinus fangiana HOM05D007251 ORTHO05D009266 1.4e-121 440.7 337 67.4
Sed0014514 Sechium edule HOM05D007251 ORTHO05D009266 6.5e-119 431.8 339 64.0
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 2.6e-112 409.8 456 50.0
AL6G21210 Arabidopsis lyrata HOM05D007251 ORTHO05D009266 3.6e-109 399.4 337 59.6
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 9.4e-102 374.8 482 50.4
Carub.0006s0915 Capsella rubella HOM05D007251 ORTHO05D009266 8.8e-92 341.7 369 51.2
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 1.6e-80 304.3 486 37.2
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 2.4e-73 280.4 489 36.8
SMO137G0044 Selaginella moellendorffii HOM05D007251 ORTHO05D009266 9.2e-73 278.5 475 36.2
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 3.0e-71 273.5 486 35.8
Oeu019776.1 Olea europaea HOM05D007251 ORTHO05D009266 4.0e-68 263.1 188 70.2
Pp3c8_4280 Physcomitrium patens HOM05D007251 ORTHO05D009266 8.9e-60 235.3 339 40.7
Actinidia06425 Actinidia chinensis HOM05D007251 ORTHO05D009266 9.2e-57 225.3 191 60.7
Sabra06G0212100 Salix brachista HOM05D007251 ORTHO05D009266 2.4e-49 200.7 212 48.6
Cfa023054 Carpinus fangiana HOM05D007251 ORTHO05D009266 6.4e-42 176.0 121 71.9
Potri.006G274133 Populus trichocarpa HOM05D007251 ORTHO05D009266 1.1e-41 175.3 121 70.2
CDE05G2179 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 5.3e-36 156.4 145 56.6
CiPaw.01G062100 Carya illinoinensis HOM05D007251 ORTHO05D009266 1.1e-25 122.1 174 46.0
Actinidia22253 Actinidia chinensis HOM05D007251 ORTHO05D009266 1.4e-25 121.7 80 76.2
Oeu019281.1 Olea europaea HOM05D007251 ORTHO05D009266 3.5e-16 90.5 71 57.7
TAR636G1232 Trochodendron aralioides HOM05D000282 ORTHO05D000272 6.9e-12 76.3 81 49.4
TAR629G1521 Trochodendron aralioides HOM05D002023 ORTHO05D002049 5.9e-11 73.2 42 76.2
Haze_15114 Corylus avellana HOM05D000891 ORTHO05D000761 2.2e-10 71.2 198 25.8
Gohir.D12G065400 Gossypium hirsutum HOM05D000891 ORTHO05D000761 2.2e-10 71.2 175 30.3
Gorai.008G068700 Gossypium raimondii HOM05D000891 ORTHO05D000761 2.2e-10 71.2 175 30.3
Thecc.01G038900 Theobroma cacao HOM05D000891 ORTHO05D000761 2.9e-10 70.9 170 30.0
MELO3C017551.2 Cucumis melo HOM05D000891 ORTHO05D000761 8.5e-10 69.3 191 27.2
QL06p045511 Quercus lobata HOM05D000891 ORTHO05D000761 1.4e-09 68.6 170 28.2
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 1.9e-09 68.2 254 24.0
Sed0016696 Sechium edule HOM05D000891 ORTHO05D000761 7.2e-09 66.2 173 28.9
Prupe.7G151800 Prunus persica HOM05D000891 ORTHO05D000761 9.4e-09 65.9 177 23.7
CANSAT01G1424 Cannabis sativa HOM05D000891 ORTHO05D000761 2.7e-08 64.3 169 26.6
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 2.7e-08 64.3 175 26.3
TAR376G0069 Trochodendron aralioides HOM05D000891 ORTHO05D000761 2.7e-08 64.3 157 27.4
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 4.6e-08 63.5 345 23.2
Nitab4.5_0001860g0050 Nicotiana tabacum HOM05D000001 ORTHO05D000003 6.1e-08 63.2 269 21.6
Thhalv10003744m.g Eutrema salsugineum HOM05D000001 ORTHO05D009429 7.9e-08 62.8 225 23.6
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 7.9e-08 62.8 229 24.5
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 1.0e-07 62.4 231 24.2
Aqoxy1G01507 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 1.4e-07 62.0 313 21.1
A09p03050 Brassica napus HOM05D000001 ORTHO05D009429 1.8e-07 61.6 231 23.4
BraA09t35946Z Brassica rapa HOM05D000001 ORTHO05D009429 1.8e-07 61.6 231 23.4
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 1.8e-07 61.6 344 21.2
Lj2P449T26 Lonicera japonica HOM05D000891 ORTHO05D000761 1.8e-07 61.6 159 27.7
ATR1156G022 Amborella trichopoda HOM05D000001 ORTHO05D000003 2.3e-07 61.2 300 23.0
DCAR_003419 Daucus carota HOM05D000001 ORTHO05D010426 2.3e-07 61.2 342 20.8
Nitab4.5_0003318g0080 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.3e-07 61.2 257 21.0
Sopen09g002180 Solanum pennellii HOM05D000855 ORTHO05D008530 2.3e-07 61.2 218 28.4
Sopen09g002200 Solanum pennellii HOM05D000855 ORTHO05D008530 2.3e-07 61.2 218 28.4
Oeu042188.1 Olea europaea HOM05D007251 ORTHO05D009266 3.0e-07 60.8 53 64.2
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 3.0e-07 60.8 229 23.6
Solyc09g007320.4 Solanum lycopersicum HOM05D000855 ORTHO05D008530 3.0e-07 60.8 184 30.4
MD02G1151200 Malus domestica HOM05D000891 ORTHO05D000761 3.9e-07 60.5 175 24.6
Sopen02g013930 Solanum pennellii HOM05D000891 ORTHO05D000761 3.9e-07 60.5 173 24.9
AL5G15320 Arabidopsis lyrata HOM05D000001 ORTHO05D009429 5.1e-07 60.1 225 22.2
BraA09t36840Z Brassica rapa HOM05D000891 ORTHO05D000761 5.1e-07 60.1 195 26.7
CSS0023086 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 5.1e-07 60.1 343 21.9
Zm00001eb315860 Zea mays HOM05D000001 ORTHO05D000003 5.1e-07 60.1 188 22.9
Actinidia16370 Actinidia chinensis HOM05D000001 ORTHO05D000003 6.7e-07 59.7 287 22.6
DCAR_003849 Daucus carota HOM05D000855 ORTHO05D008530 6.7e-07 59.7 223 25.1
AagrBONN_evm.TU.Sc2ySwM_362.2053 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.8e-07 59.3 304 22.4
CAN.G608.19 Capsicum annuum HOM05D000855 ORTHO05D008530 8.8e-07 59.3 218 28.0
PSO832G1561 Papaver somniferum HOM05D000001 ORTHO05D000003 8.8e-07 59.3 204 23.5
Solyc02g068630.1 Solanum lycopersicum HOM05D000001 ORTHO05D000003 8.8e-07 59.3 206 25.7
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 8.8e-07 59.3 310 23.2
BcaC04g23932 Brassica carinata HOM05D000001 ORTHO05D009429 1.1e-06 58.9 231 22.5
BolC9t53248H Brassica oleracea HOM05D000001 ORTHO05D009429 1.1e-06 58.9 231 22.5
Nn7g37790 Nelumbo nucifera HOM05D000001 ORTHO05D000003 1.1e-06 58.9 312 23.1
PSO170G2610 Papaver somniferum HOM05D000001 ORTHO05D000003 1.1e-06 58.9 257 21.8
Psat2g150720 Pisum sativum HOM05D007251 ORTHO05D009266 1.1e-06 58.9 44 61.4
PGSC0003DMG400001735 Solanum tuberosum HOM05D000855 ORTHO05D008530 1.1e-06 58.9 218 28.0
C09p03230 Brassica napus HOM05D000001 ORTHO05D009429 1.5e-06 58.5 231 22.5
CAN.G53.43 Capsicum annuum HOM05D000891 ORTHO05D000761 1.5e-06 58.5 174 24.1
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 1.5e-06 58.5 350 21.1
PGSC0003DMG400010442 Solanum tuberosum HOM05D000001 ORTHO05D000003 1.5e-06 58.5 206 25.2
CSS0013853 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 2.0e-06 58.2 343 21.6
FAN21G2235 Fragaria x ananassa HOM05D002785 ORTHO05D003042 2.0e-06 58.2 232 24.6
Solyc02g062910.3 Solanum lycopersicum HOM05D000891 ORTHO05D000761 2.0e-06 58.2 173 24.3
Sopen02g017800 Solanum pennellii HOM05D000001 ORTHO05D000003 2.0e-06 58.2 206 25.7
TWI53G1937 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 2.0e-06 58.2 171 24.6
AL7G14330 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 2.5e-06 57.8 178 25.3
CANSAT25G1879 Cannabis sativa HOM05D000001 ORTHO05D000003 2.5e-06 57.8 218 23.9
AUR62021543 Chenopodium quinoa HOM05D000001 ORTHO05D010467 2.5e-06 57.8 186 23.7
Aqoxy1G01503 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 3.3e-06 57.4 314 21.0
C03p79970 Brassica napus HOM05D000891 ORTHO05D000761 3.3e-06 57.4 178 28.1
BolC3t20249H Brassica oleracea HOM05D000891 ORTHO05D000761 3.3e-06 57.4 178 28.1
BraA08t34190Z Brassica rapa HOM05D000891 ORTHO05D000761 3.3e-06 57.4 178 28.1
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 3.3e-06 57.4 357 20.7
CsaV3_5G039800 Cucumis sativus L. HOM05D000001 ORTHO05D000003 3.3e-06 57.4 279 25.1
DCAR_009287 Daucus carota HOM05D000855 ORTHO05D008530 3.3e-06 57.4 223 25.1
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 3.3e-06 57.4 353 21.8
PGSC0003DMG400015467 Solanum tuberosum HOM05D000891 ORTHO05D000761 3.3e-06 57.4 173 24.3
Cfa019806 Carpinus fangiana HOM05D007251 ORTHO05D009266 4.3e-06 57.0 29 86.2
PGR119G1317 Punica granatum HOM05D000891 ORTHO05D000761 4.3e-06 57.0 169 25.4
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 4.3e-06 57.0 353 21.8
BcaC01g00449 Brassica carinata HOM05D000891 ORTHO05D000761 5.7e-06 56.6 178 28.1
Sp2g15660 Schrenkiella parvula HOM05D000001 ORTHO05D009429 5.7e-06 56.6 225 22.7
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 5.7e-06 56.6 350 22.0


User provided reference genes

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