Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 5.5e-52 207.2 96 100.0
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 8.6e-45 183.3 88 94.3
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.2e-30 136.3 89 69.7
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 6.0e-30 134.0 94 66.0
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.0e-29 133.3 94 63.8
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.3e-29 132.9 94 63.8
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 1.3e-29 132.9 94 63.8
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 5.0e-29 131.0 97 63.9
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 3.3e-28 128.3 96 63.5
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 4.3e-28 127.9 96 62.5
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.3e-28 127.9 96 62.5
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 5.6e-28 127.5 96 62.5
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 5.6e-28 127.5 90 66.7
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 5.6e-28 127.5 97 64.9
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 7.3e-28 127.1 90 65.6
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 9.5e-28 126.7 99 62.6
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 9.5e-28 126.7 89 62.9
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.1e-27 125.6 90 64.4
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.2e-27 124.0 90 65.6
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.4e-26 122.9 90 64.4
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.4e-26 122.9 94 62.8
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.8e-26 122.5 91 63.7
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.8e-26 122.5 91 63.7
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 1.8e-26 122.5 91 60.4
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 4.0e-26 121.3 88 62.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 4.0e-26 121.3 96 58.3
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 4.0e-26 121.3 91 61.5
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 5.2e-26 120.9 90 62.2
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 5.2e-26 120.9 97 61.9
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 6.8e-26 120.6 95 60.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 8.9e-26 120.2 96 57.3
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 8.9e-26 120.2 96 57.3
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 8.9e-26 120.2 91 61.5
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.2e-25 119.8 92 58.7
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 2.0e-25 119.0 96 57.3
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 3.4e-25 118.2 96 58.3
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 5.8e-25 117.5 101 57.4
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 9.8e-25 116.7 94 57.4
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 1.3e-24 116.3 84 65.5
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 1.7e-24 115.9 94 58.5
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 2.2e-24 115.5 87 63.2
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 3.7e-24 114.8 96 53.1
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 3.7e-24 114.8 91 61.5
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 4.9e-24 114.4 94 56.4
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 6.4e-24 114.0 94 55.3
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 6.4e-24 114.0 94 56.4
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 8.3e-24 113.6 88 59.1
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.1e-23 113.2 96 52.1
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.1e-23 113.2 96 55.2
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 1.4e-23 112.8 94 56.4
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 3.2e-23 111.7 91 62.6
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 4.1e-23 111.3 94 54.3
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 7.1e-23 110.5 88 62.5
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 7.1e-23 110.5 91 58.2
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 3.5e-22 108.2 90 58.9
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 4.6e-22 107.8 92 57.6
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 7.8e-22 107.1 96 52.1
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 2.3e-21 105.5 90 57.8
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.3e-21 105.5 90 57.8
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.3e-21 105.5 90 57.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 2.3e-21 105.5 90 57.8
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 3.0e-21 105.1 93 57.0
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 5.1e-21 104.4 90 62.2
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 6.6e-21 104.0 96 52.1
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.1e-20 103.2 91 58.2
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 2.5e-20 102.1 93 58.1
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 7.3e-20 100.5 93 57.0
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 7.3e-20 100.5 91 57.1
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 2.8e-19 98.6 85 51.8
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 3.6e-19 98.2 93 55.9
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 1.8e-18 95.9 94 48.9
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 3.1e-18 95.1 90 48.9
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 4.0e-18 94.7 93 51.6
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 8.9e-18 93.6 84 51.2
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 4.4e-17 91.3 90 45.6
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 5.8e-17 90.9 94 48.9
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 5.8e-17 90.9 97 42.3
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 4.9e-16 87.8 95 41.1
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 2.1e-14 82.4 93 49.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 6.0e-14 80.9 94 48.9
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 2.3e-13 79.0 91 41.8
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 5.6e-12 74.3 92 43.5
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.8e-11 72.0 44 61.4
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 4.0e-10 68.2 62 56.5
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 6.8e-10 67.4 44 61.4
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 1.2e-09 66.6 46 63.0
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 1.5e-09 66.2 38 71.1
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 3.8e-08 61.6 59 49.2
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 2.4e-07 58.9 103 34.0
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 7.1e-07 57.4 36 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 4.6e-06 54.7 99 34.3
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 4.6e-06 54.7 59 45.8


User provided reference genes

Program Settings