Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 3.7e-50 201.1 90 100.0
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 7.8e-48 193.4 90 96.7
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.5e-46 189.1 89 93.3
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 7.3e-46 186.8 89 94.4
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 3.6e-45 184.5 89 93.3
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 6.1e-45 183.7 89 91.0
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 8.0e-45 183.3 89 91.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 88.8
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 89.9
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 89.9
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 89.9
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 2.3e-44 181.8 90 87.8
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 87.6
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 87.6
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 2.3e-44 181.8 89 87.6
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 3.0e-44 181.4 89 87.6
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 4.0e-44 181.0 89 86.5
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 5.2e-44 180.6 89 86.5
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 5.2e-44 180.6 89 86.5
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 6.8e-44 180.3 89 87.6
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 6.8e-44 180.3 89 86.5
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 6.8e-44 180.3 89 86.5
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 6.8e-44 180.3 89 85.4
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 8.9e-44 179.9 90 86.7
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.0e-43 178.7 89 85.4
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 3.4e-43 177.9 89 85.4
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 3.4e-43 177.9 89 83.1
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 3.4e-43 177.9 89 83.1
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 4.4e-43 177.6 89 85.4
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 7.5e-43 176.8 89 83.1
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 9.8e-43 176.4 89 82.0
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 1.3e-42 176.0 89 83.1
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 1.3e-42 176.0 89 85.4
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 1.7e-42 175.6 89 83.1
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 1.7e-42 175.6 89 85.4
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.9e-42 174.9 89 85.4
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 2.9e-42 174.9 89 80.9
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 2.9e-42 174.9 89 84.3
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.7e-42 174.5 89 82.0
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 3.7e-42 174.5 89 82.0
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 6.4e-42 173.7 89 82.0
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 6.4e-42 173.7 89 83.1
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 6.4e-42 173.7 89 83.1
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 8.3e-42 173.3 89 80.9
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.1e-41 172.9 89 83.1
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.1e-41 172.9 89 83.1
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.1e-41 172.9 89 83.1
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.1e-41 172.9 89 83.1
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.1e-41 172.9 89 80.9
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.4e-41 172.6 89 84.3
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 1.4e-41 172.6 89 83.1
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.4e-41 172.6 89 82.0
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 1.4e-41 172.6 89 82.0
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.9e-41 172.2 89 79.8
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.9e-41 172.2 89 79.8
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.9e-41 172.2 89 83.1
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-41 172.2 89 80.9
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-41 172.2 89 80.9
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 2.4e-41 171.8 89 82.0
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 2.4e-41 171.8 89 82.0
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.4e-41 171.8 89 82.0
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 4.1e-41 171.0 89 82.0
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 5.4e-41 170.6 89 83.1
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 5.4e-41 170.6 89 78.7
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 5.4e-41 170.6 89 86.5
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 5.4e-41 170.6 89 80.9
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 7.0e-41 170.2 89 83.1
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 7.0e-41 170.2 89 79.8
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 7.0e-41 170.2 89 80.9
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 7.0e-41 170.2 89 80.9
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.2e-40 169.5 89 80.9
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.6e-40 169.1 89 79.8
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.0e-40 168.7 89 80.9
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.0e-40 168.7 89 80.9
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.7e-40 168.3 89 80.9
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.7e-40 168.3 89 78.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 2.7e-40 168.3 89 78.7
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 3.5e-40 167.9 89 77.5
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.6e-40 167.5 89 78.7
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 4.6e-40 167.5 89 79.8
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 6.0e-40 167.2 88 80.7
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.0e-40 167.2 89 79.8
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.3e-39 166.0 88 77.3
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.3e-39 166.0 89 79.8
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.7e-39 165.6 84 84.5
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.3e-39 165.2 109 68.8
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.0e-39 164.9 88 78.4
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 3.9e-39 164.5 89 82.0
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 5.0e-39 164.1 88 75.0
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.0e-39 164.1 89 78.7
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 8.6e-39 163.3 84 79.8
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 1.5e-38 162.5 88 75.0
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.5e-38 162.5 89 76.4
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 1.9e-38 162.2 89 77.5
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.5e-38 161.8 88 76.1
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.5e-38 161.8 89 80.9
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 5.6e-38 160.6 89 77.5
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 1.2e-37 159.5 89 77.5
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.2e-37 159.5 111 66.7
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 2.1e-37 158.7 89 76.4
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 4.7e-37 157.5 89 75.3
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 4.7e-37 157.5 76 88.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 6.2e-37 157.1 93 77.4
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 8.0e-37 156.8 89 74.2
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 5.2e-36 154.1 89 69.7
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 8.9e-36 153.3 89 71.9
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 8.9e-36 153.3 89 71.9
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 8.9e-36 153.3 89 71.9
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 8.9e-36 153.3 89 71.9
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.2e-35 152.9 89 71.9
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.5e-35 152.5 89 71.9
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 2.6e-35 151.8 89 70.8
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 2.6e-35 151.8 89 70.8
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 2.6e-35 151.8 89 70.8
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 2.6e-35 151.8 89 70.8
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 2.6e-35 151.8 89 70.8
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.4e-35 151.0 89 71.9
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 5.8e-35 150.6 87 71.3
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 5.8e-35 150.6 89 73.0
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.7e-34 147.9 79 78.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 6.4e-34 147.1 89 70.8
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.1e-33 146.4 89 70.8
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.0e-32 140.6 99 63.6
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.7e-31 139.0 76 77.6
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.1e-31 137.5 78 76.9
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.8e-29 131.7 72 76.4
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 3.6e-29 131.3 91 61.5
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 6.8e-28 127.1 65 81.5
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 4.4e-27 124.4 67 79.1
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 9.2e-25 116.7 66 77.3
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 2.1e-24 115.5 59 91.5
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 4.6e-24 114.4 60 80.0
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 1.5e-22 109.4 59 78.0
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.3e-22 107.8 72 65.3
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 2.1e-16 89.0 70 51.4
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 3.0e-15 85.1 70 50.0
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 8.1e-13 77.0 59 57.6
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.9e-09 65.9 36 72.2
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 9.3e-09 63.5 57 45.6


User provided reference genes

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