Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 3.9e-137 491.5 254 100.0
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.9e-136 489.2 254 99.2
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 9.3e-123 443.7 254 87.0
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 2.5e-120 435.6 254 85.8
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 1.3e-119 433.3 254 85.0
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 9.0e-118 427.2 254 84.3
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.4e-117 425.2 254 83.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.2e-116 422.5 254 82.7
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.9e-116 422.2 254 82.3
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 6.5e-116 421.0 254 81.9
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.4e-115 419.9 254 81.1
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.5e-115 419.1 254 81.5
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 4.2e-115 418.3 255 82.0
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 9.3e-115 417.2 254 81.1
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 3.5e-114 415.2 254 79.5
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 3.5e-114 415.2 254 79.5
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 6.0e-114 414.5 254 78.7
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 6.0e-114 414.5 254 78.7
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.3e-113 413.3 254 79.1
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.3e-113 413.3 254 79.1
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 1.3e-113 413.3 254 79.1
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.3e-113 412.5 254 78.7
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 3.0e-113 412.1 254 78.3
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 5.1e-113 411.4 253 79.1
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.7e-113 411.0 254 78.0
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 6.7e-113 411.0 254 78.0
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.1e-112 410.2 254 77.6
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.5e-112 409.8 254 78.3
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.9e-112 409.5 254 77.6
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 3.3e-112 408.7 254 78.7
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 3.3e-112 408.7 254 78.7
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 3.3e-112 408.7 254 80.3
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 5.7e-112 407.9 254 78.7
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.7e-112 407.9 254 79.1
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 7.4e-112 407.5 254 78.7
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 9.6e-112 407.1 254 79.9
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.3e-111 406.8 254 77.6
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.1e-111 406.0 254 79.5
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 4.8e-111 404.8 249 78.7
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 4.8e-111 404.8 254 77.2
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 6.3e-111 404.4 254 78.3
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 8.2e-111 404.1 254 77.6
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 1.1e-110 403.7 249 79.5
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.4e-110 403.3 254 77.2
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 4.1e-110 401.7 254 76.4
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 9.0e-110 400.6 254 76.8
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.2e-109 400.2 254 76.8
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.5e-109 399.8 254 78.0
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 2.0e-109 399.4 254 76.8
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 3.4e-109 398.7 249 77.9
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.5e-109 398.3 254 76.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 7.6e-109 397.5 254 76.0
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 7.6e-109 397.5 254 76.4
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.3e-108 396.7 254 75.2
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.7e-108 396.4 244 77.9
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.7e-108 396.4 254 76.0
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 2.2e-108 396.0 253 78.7
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 3.8e-108 395.2 255 76.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 3.8e-108 395.2 236 83.1
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 5.0e-108 394.8 254 76.8
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 5.0e-108 394.8 254 75.2
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 6.5e-108 394.4 254 76.4
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 8.4e-108 394.0 255 76.5
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.9e-107 392.9 251 76.9
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.9e-107 392.9 254 74.8
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 4.2e-107 391.7 254 74.4
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 5.5e-107 391.3 254 74.8
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 3.5e-106 388.7 254 76.0
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 4.6e-106 388.3 270 71.9
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 1.0e-105 387.1 254 74.8
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 1.8e-105 386.3 257 75.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 3.0e-105 385.6 254 74.0
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 1.1e-104 383.6 265 72.8
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 5.7e-104 381.3 254 73.2
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 9.7e-104 380.6 254 72.0
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.8e-102 376.3 235 76.2
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 6.9e-102 374.4 254 71.7
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 1.2e-101 373.6 254 71.7
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.2e-101 373.6 257 72.4
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.4e-101 372.1 257 72.0
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 7.7e-101 370.9 249 72.7
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.0e-100 370.5 235 75.7
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.0e-100 370.5 236 77.5
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.7e-100 369.8 234 75.6
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 2.2e-100 369.4 254 72.4
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 8.5e-100 367.5 274 67.5
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.4e-99 366.7 233 75.5
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 2.5e-99 365.9 232 76.3
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.6e-98 362.1 211 84.8
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 3.1e-94 349.0 200 86.0
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.3e-92 343.6 211 77.7
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.4e-91 340.1 249 68.3
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 4.2e-91 338.6 229 73.4
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 6.7e-89 331.3 254 66.1
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.1e-88 330.5 254 68.1
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 1.7e-87 326.6 200 77.5
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 9.1e-86 320.9 234 68.4
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 6.3e-79 298.1 336 50.6
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.1e-78 297.4 259 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 9.4e-75 284.3 255 55.7
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.3e-68 263.8 243 54.7
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 4.2e-67 258.8 256 50.4
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.0e-64 250.0 152 78.3
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 2.6e-64 249.6 249 52.6
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 2.8e-63 246.1 180 67.2
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 4.5e-61 238.8 148 78.4
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.1e-51 207.6 129 74.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 3.3e-51 206.1 266 42.1
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 7.3e-43 178.3 105 81.9
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.4e-33 147.5 87 87.4
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 4.0e-33 146.0 87 87.4
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.1e-30 136.0 81 87.7
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.4e-22 110.9 76 72.4
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.3e-20 104.4 65 72.3
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.1e-20 102.4 64 73.4
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 4.8e-18 95.9 260 30.0
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 1.4e-09 67.8 41 80.5
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 1.5e-08 64.3 35 88.6
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 3.4e-08 63.2 157 38.9


User provided reference genes

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