Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 7.9e-42 173.3 86 100.0
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 6.3e-39 163.7 82 98.8
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 5.5e-35 150.6 85 85.9
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 2.0e-32 142.1 85 80.0
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 3.3e-32 141.4 86 80.2
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 3.3e-32 141.4 86 80.2
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 3.3e-32 141.4 86 79.1
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 7.4e-32 140.2 85 77.6
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 2.2e-31 138.7 85 78.8
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 2.8e-31 138.3 85 76.5
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 2.8e-31 138.3 86 77.9
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 2.8e-31 138.3 87 78.2
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 4.8e-31 137.5 86 77.9
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 4.8e-31 137.5 85 77.6
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 6.3e-31 137.1 86 77.9
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 8.2e-31 136.7 83 73.5
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.1e-30 136.3 86 79.1
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 1.1e-30 136.3 86 76.7
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 1.1e-30 136.3 85 77.6
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 1.4e-30 136.0 86 80.2
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 2.4e-30 135.2 86 79.1
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 2.4e-30 135.2 83 74.7
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 5.3e-30 134.0 86 76.7
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 5.3e-30 134.0 87 75.9
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 5.3e-30 134.0 87 75.9
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 5.3e-30 134.0 87 74.7
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 5.3e-30 134.0 86 76.7
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 9.1e-30 133.3 86 74.4
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 9.1e-30 133.3 86 74.4
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 9.1e-30 133.3 86 74.4
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 1.2e-29 132.9 85 75.3
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 2.0e-29 132.1 85 74.1
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.0e-29 132.1 87 74.7
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 2.6e-29 131.7 85 74.1
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 3.5e-29 131.3 88 75.0
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 3.5e-29 131.3 83 75.9
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 3.5e-29 131.3 83 75.9
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 3.5e-29 131.3 87 74.7
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 3.5e-29 131.3 86 73.3
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 7.7e-29 130.2 86 72.1
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 7.7e-29 130.2 87 73.6
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 1.3e-28 129.4 83 72.3
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 1.3e-28 129.4 83 72.3
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.7e-28 129.0 85 75.3
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.7e-28 129.0 85 75.3
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 1.7e-28 129.0 87 74.7
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.2e-28 128.6 87 73.6
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 2.9e-28 128.3 85 74.1
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 3.8e-28 127.9 83 71.1
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 3.8e-28 127.9 86 73.3
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 3.8e-28 127.9 85 74.1
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 3.8e-28 127.9 85 74.1
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 5.0e-28 127.5 85 72.9
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 1.1e-27 126.3 86 70.9
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 1.5e-27 125.9 87 74.7
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 1.9e-27 125.6 87 74.7
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 1.9e-27 125.6 81 75.3
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 2.5e-27 125.2 86 66.3
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 2.5e-27 125.2 83 67.5
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 2.5e-27 125.2 86 73.3
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 4.2e-27 124.4 83 67.5
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 4.2e-27 124.4 83 67.5
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 4.2e-27 124.4 83 67.5
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 4.2e-27 124.4 83 67.5
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 4.2e-27 124.4 83 67.5
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 5.5e-27 124.0 86 70.9
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 5.5e-27 124.0 86 68.6
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 9.4e-27 123.2 83 66.3
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 9.4e-27 123.2 83 67.5
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 1.2e-26 122.9 87 71.3
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 1.2e-26 122.9 83 66.3
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 1.2e-26 122.9 85 70.6
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 1.6e-26 122.5 85 70.6
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 1.6e-26 122.5 87 70.1
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 2.7e-26 121.7 87 70.1
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 4.7e-26 120.9 89 68.5
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 4.7e-26 120.9 86 66.3
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 6.1e-26 120.6 86 69.8
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 8.0e-26 120.2 87 70.1
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 1.0e-25 119.8 86 68.6
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 1.0e-25 119.8 83 69.9
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 1.0e-25 119.8 86 66.3
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 1.4e-25 119.4 89 67.4
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 1.4e-25 119.4 87 70.1
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 1.8e-25 119.0 86 66.3
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 2.3e-25 118.6 85 68.2
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 3.0e-25 118.2 93 67.7
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 6.7e-25 117.1 83 65.1
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 6.7e-25 117.1 86 65.1
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 6.7e-25 117.1 87 65.5
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 1.5e-24 115.9 87 67.8
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 1.5e-24 115.9 83 67.5
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 2.0e-24 115.5 86 67.4
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 2.6e-24 115.2 95 58.9
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 4.4e-24 114.4 86 65.1
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 7.5e-24 113.6 90 63.3
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 1.3e-23 112.8 83 61.4
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 2.2e-23 112.1 83 65.1
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 2.2e-23 112.1 90 61.1
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 4.8e-23 110.9 89 60.7
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 6.3e-23 110.5 88 60.2
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 1.1e-22 109.8 93 63.4
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 1.1e-22 109.8 83 60.2
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 1.1e-22 109.8 83 60.2
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 3.1e-22 108.2 92 58.7
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 4.1e-22 107.8 83 65.1
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 2.9e-20 101.7 90 54.4
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 1.4e-17 92.8 85 54.1
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 5.2e-17 90.9 84 48.8
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 1.1e-14 83.2 93 47.3
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 1.2e-13 79.7 60 65.0
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 8.0e-10 67.0 52 67.3
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 8.0e-10 67.0 53 66.0
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.2e-09 64.3 52 65.4
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.2e-09 64.3 52 65.4
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.2e-09 64.3 52 65.4
Lalb_Chr03g0028111 Lupinus albus HOM05D006639 ORTHO05D008339 4.9e-07 57.8 39 71.8
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 6.3e-07 57.4 81 38.3
Gohir.A11G057250 Gossypium hirsutum HOM05D000297 ORTHO05D000193 4.1e-06 54.7 81 37.0
Gohir.D11G061250 Gossypium hirsutum HOM05D000297 ORTHO05D000193 4.1e-06 54.7 81 37.0
Gorai.007G066100 Gossypium raimondii HOM05D000297 ORTHO05D000193 4.1e-06 54.7 81 37.0
COL.COLO4_35793 Corchorus olitorius HOM05D000297 ORTHO05D000193 5.4e-06 54.3 57 43.9
Duzib187G0680 Durio zibethinus HOM05D000297 ORTHO05D000193 5.4e-06 54.3 57 43.9
Duzib264G0428 Durio zibethinus HOM05D000297 ORTHO05D000193 5.4e-06 54.3 57 43.9
Gohir.A09G004500 Gossypium hirsutum HOM05D000297 ORTHO05D000193 5.4e-06 54.3 57 43.9
Gohir.D09G004000 Gossypium hirsutum HOM05D000297 ORTHO05D000193 5.4e-06 54.3 57 43.9
Gorai.006G005400 Gossypium raimondii HOM05D000297 ORTHO05D000193 5.4e-06 54.3 57 43.9
TWI38G1419 Tripterygium wilfordii HOM05D000297 ORTHO05D000193 5.4e-06 54.3 81 37.0
Migut.G00175 Erythranthe guttata HOM05D000297 ORTHO05D000193 7.0e-06 53.9 86 32.6
Aqoxy5G01992 Aquilegia oxysepala HOM05D000297 ORTHO05D000193 9.2e-06 53.5 81 35.8
Dinv19501 Davidia involucrata HOM05D000297 ORTHO05D000193 9.2e-06 53.5 81 35.8
Gohir.D10G216000 Gossypium hirsutum HOM05D000297 ORTHO05D000193 9.2e-06 53.5 81 37.0


User provided reference genes

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