Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 9.9e-280 966.1 467 100.0
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 7.6e-264 913.3 582 80.2
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 3.5e-168 595.5 576 55.9
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 9.3e-161 570.9 509 57.4
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 2.4e-153 546.2 568 51.9
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.2e-152 543.9 565 52.2
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 6.0e-152 541.6 565 51.9
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 3.0e-151 539.3 563 52.2
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.3e-149 533.9 562 51.8
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 3.7e-149 532.3 551 53.5
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.1e-148 530.8 593 50.6
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 3.1e-148 529.3 578 48.8
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.5e-146 521.5 579 50.3
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 4.2e-145 518.8 580 50.2
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.5e-144 515.8 596 47.8
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 4.3e-142 508.8 555 49.7
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 9.6e-142 507.7 553 51.4
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 8.2e-141 504.6 555 49.7
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 6.9e-140 501.5 554 49.6
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 2.6e-139 499.6 554 49.8
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 7.6e-139 498.0 568 49.3
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.3e-138 497.3 580 46.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.9e-138 496.1 587 46.5
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 1.9e-137 493.4 530 50.6
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 7.9e-136 488.0 548 48.4
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 7.9e-136 488.0 562 49.3
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 3.7e-133 479.2 528 50.8
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 4.8e-133 478.8 568 47.7
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.7e-130 470.3 557 47.4
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 2.9e-130 469.5 597 44.6
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.5e-129 466.5 558 47.1
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.5e-129 465.3 558 46.6
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 2.1e-128 463.4 560 46.8
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 3.6e-128 462.6 513 50.1
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.4e-127 460.7 536 47.0
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.1e-126 457.6 557 46.5
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 4.3e-126 455.7 527 47.2
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.3e-125 454.1 571 43.8
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 4.1e-124 449.1 554 47.3
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 2.0e-123 446.8 554 47.7
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 6.5e-122 441.8 577 44.5
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 8.5e-122 441.4 545 45.7
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 9.4e-121 438.0 499 47.3
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 1.2e-120 437.6 570 45.1
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.6e-120 437.2 514 45.9
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 2.7e-120 436.4 540 45.2
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 1.0e-119 434.5 583 42.9
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.3e-119 433.3 566 43.3
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 3.9e-119 432.6 544 45.2
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 1.5e-118 430.6 558 43.7
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 2.0e-118 430.3 546 44.7
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 3.3e-118 429.5 561 44.9
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 3.3e-118 429.5 571 42.9
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 4.4e-118 429.1 546 44.5
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 1.1e-116 424.5 501 48.5
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 3.1e-116 422.9 558 43.9
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.2e-115 421.0 501 47.9
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 2.0e-115 420.2 506 46.8
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 2.0e-115 420.2 562 42.9
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 2.0e-115 420.2 551 44.5
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 4.5e-115 419.1 504 47.6
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.0e-114 417.9 501 47.5
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.3e-114 417.5 545 44.2
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.3e-114 417.5 572 43.2
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.9e-114 416.4 551 43.7
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 3.8e-114 416.0 553 43.6
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 3.8e-114 416.0 579 42.8
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 5.0e-114 415.6 553 43.2
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.1e-113 414.5 502 47.4
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.1e-113 414.5 502 47.4
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.1e-113 414.5 526 45.8
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 1.9e-113 413.7 558 43.2
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 2.5e-113 413.3 605 40.2
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 3.2e-113 412.9 523 45.3
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 7.2e-113 411.8 535 46.0
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 1.6e-112 410.6 526 45.2
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 2.7e-112 409.8 496 46.4
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 3.6e-112 409.5 553 44.8
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 8.8e-111 404.8 546 42.5
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 2.6e-110 403.3 411 53.3
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 3.7e-109 399.4 489 46.6
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.1e-108 397.9 597 42.0
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 5.3e-108 395.6 561 42.2
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 2.9e-106 389.8 516 44.2
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 3.6e-104 382.9 432 49.1
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.3e-103 380.2 584 37.7
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 5.0e-98 362.5 398 49.5
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 3.2e-97 359.8 414 48.1
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 3.4e-94 349.7 398 48.5
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.8e-93 346.7 529 41.0
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 1.1e-92 344.7 530 37.0
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.1e-89 334.7 578 36.7
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 7.2e-89 332.0 516 39.5
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.2e-84 316.6 446 41.9
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 3.9e-82 309.7 397 44.8
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.9e-81 307.4 367 45.2
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 4.0e-79 299.7 514 36.4
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 3.4e-78 296.6 357 46.8
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 6.4e-69 265.8 429 37.3
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 7.3e-65 252.3 230 53.5
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.9e-61 240.4 186 61.3
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 9.6e-57 225.3 216 55.1
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 2.8e-56 223.8 468 34.0
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 3.4e-46 190.3 134 67.2
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 9.9e-46 188.7 619 26.7
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 1.3e-45 188.3 354 34.7
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 6.4e-45 186.0 140 63.6
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 4.0e-39 166.8 130 60.8
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.1e-36 158.7 602 25.7
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 1.4e-36 158.3 378 28.0
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 1.1e-31 142.1 341 32.6
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.9e-25 121.3 132 48.5
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 1.4e-20 105.1 147 44.9
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.3e-13 82.0 74 52.7
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 3.2e-12 77.4 76 44.7
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.2e-12 77.4 63 54.0
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 9.4e-12 75.9 326 22.1
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.5e-09 68.6 74 45.9
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 7.4e-09 66.2 93 34.4
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 9.7e-09 65.9 43 72.1


User provided reference genes

Program Settings