Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy8s003 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 9.8e-170 600.1 320 100.0
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 7.0e-168 594.0 320 96.2
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 9.7e-85 317.8 327 59.0
Nn7g38300 Nelumbo nucifera HOM05D005424 ORTHO05D006726 2.4e-83 313.2 329 58.7
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 5.9e-82 308.5 320 57.5
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 2.5e-80 303.1 327 57.2
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 7.9e-79 298.1 326 55.8
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 2.3e-78 296.6 328 55.2
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 2.0e-77 293.5 327 55.0
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 1.3e-76 290.8 326 54.6
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 1.1e-75 287.7 329 56.2
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 1.8e-75 287.0 326 53.7
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 5.3e-75 285.4 320 55.6
Dinv18754 Davidia involucrata HOM05D005424 ORTHO05D006726 7.0e-75 285.0 329 55.6
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 3.5e-74 282.7 311 55.9
FAN13G2865 Fragaria x ananassa HOM05D005424 ORTHO05D006726 7.7e-74 281.6 326 53.1
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 3.8e-73 279.3 326 53.1
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 3.8e-73 279.3 328 53.4
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 1.5e-72 277.3 323 54.8
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 1.9e-72 276.9 314 54.5
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 1.9e-72 276.9 314 54.5
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 2.5e-72 276.6 325 51.4
TWI81G0285 Tripterygium wilfordii HOM05D005424 ORTHO05D006726 1.2e-71 274.2 322 54.7
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 2.7e-71 273.1 324 54.0
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 8.0e-71 271.6 294 54.8
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 1.8e-70 270.4 272 59.6
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea HOM05D005424 ORTHO05D006726 2.3e-70 270.0 325 53.2
CANSAT21G2321 Cannabis sativa HOM05D005424 ORTHO05D006726 2.3e-70 270.0 310 51.9
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 2.3e-70 270.0 327 53.2
Duzib205G0106 Durio zibethinus HOM05D005424 ORTHO05D006726 8.8e-70 268.1 320 54.1
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 1.7e-68 263.8 312 54.5
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 2.2e-68 263.5 351 49.0
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 3.7e-68 262.7 276 55.1
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 8.2e-68 261.5 328 52.1
Glyma.20G217700 Glycine max HOM05D005424 ORTHO05D006726 1.1e-67 261.2 326 51.5
Potri.011G152600 Populus trichocarpa HOM05D005424 ORTHO05D006726 1.4e-67 260.8 323 52.3
Cc08_g16940 Coffea canephora HOM05D005424 ORTHO05D006726 1.8e-67 260.4 319 52.0
Potri.001G448900 Populus trichocarpa HOM05D005424 ORTHO05D006726 3.1e-67 259.6 322 52.2
Glyma.10G172500 Glycine max HOM05D005424 ORTHO05D006726 2.7e-66 256.5 326 51.2
CsaV3_6G002490 Cucumis sativus L. HOM05D005424 ORTHO05D006726 3.8e-65 252.7 323 51.1
VMungo0720G0206 Vigna mungo HOM05D005424 ORTHO05D006726 5.0e-65 252.3 330 50.9
MELO3C025037.2 Cucumis melo HOM05D005424 ORTHO05D006726 1.5e-64 250.8 323 50.8
ClCG08G001970 Citrullus lanatus HOM05D005424 ORTHO05D006726 1.9e-64 250.4 323 51.1
Sabra16G0303000 Salix brachista HOM05D005424 ORTHO05D006726 3.2e-64 249.6 316 52.2
Lj5g0003487 Lotus japonicus HOM05D005424 ORTHO05D006726 2.1e-63 246.9 328 49.4
Sabra11G0148200 Salix brachista HOM05D005424 ORTHO05D006726 4.7e-63 245.7 323 51.1
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 6.8e-62 241.9 323 48.9
Lj2A154T41 Lonicera japonica HOM05D005424 ORTHO05D006726 6.8e-62 241.9 323 51.1
Ca_09953_v3 Cicer arietinum L. HOM05D005424 ORTHO05D006726 1.2e-61 241.1 327 50.8
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 1.2e-61 241.1 330 49.7
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 1.2e-61 241.1 324 49.4
Lalb_Chr21g0311581 Lupinus albus HOM05D005424 ORTHO05D006726 2.6e-61 240.0 320 49.4
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 2.6e-61 240.0 284 53.2
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 3.4e-61 239.6 324 49.1
Sc01g0010800 Simmondsia chinensis HOM05D005424 ORTHO05D006726 4.4e-61 239.2 322 50.9
AUR62019939 Chenopodium quinoa HOM05D005424 ORTHO05D006726 7.5e-61 238.4 313 47.9
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 1.7e-60 237.3 316 49.4
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 1.7e-60 237.3 338 48.8
Cpa.g.sc37.92 Carica papaya HOM05D005424 ORTHO05D006726 3.7e-60 236.1 305 49.8
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 8.3e-60 235.0 316 49.1
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 1.1e-59 234.6 286 51.0
Psat6g052720 Pisum sativum HOM05D005424 ORTHO05D006726 2.4e-59 233.4 329 48.3
Medtr1g077940 Medicago truncatula HOM05D005424 ORTHO05D006726 3.1e-59 233.0 330 49.4
Lalb_Chr21g0311601 Lupinus albus HOM05D005424 ORTHO05D006726 4.1e-59 232.6 323 46.4
PGR031G0320 Punica granatum HOM05D005424 ORTHO05D006726 2.7e-58 229.9 280 50.4
EL10Ac5g12404 Beta vulgaris HOM05D005424 ORTHO05D006726 1.7e-57 227.3 316 45.6
Ah.07g198200 Amaranthus hybridus HOM05D005424 ORTHO05D006726 3.8e-57 226.1 312 46.8
AUR62007075 Chenopodium quinoa HOM05D005424 ORTHO05D006726 3.8e-57 226.1 313 47.9
Phvul.L004801 Phaseolus vulgaris HOM05D005424 ORTHO05D006726 1.1e-56 224.6 356 46.3
Hund11337 Selenicereus undatus HOM05D005424 ORTHO05D006726 4.2e-56 222.6 320 47.5
THA.LOC104806458 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 2.1e-55 220.3 273 50.2
TAR374G0493 Trochodendron aralioides HOM05D005424 ORTHO05D006726 2.1e-55 220.3 217 61.8
MSTRG.13701 Avicennia marina HOM05D005424 ORTHO05D006726 4.7e-55 219.2 260 50.8
HanXRQChr07g0192271 Helianthus annuus HOM05D005424 ORTHO05D006726 3.0e-54 216.5 318 49.4
Migut.E00727 Erythranthe guttata HOM05D005424 ORTHO05D006726 2.0e-53 213.8 319 45.8
Haze_09196 Corylus avellana HOM05D005424 ORTHO05D006726 2.8e-52 209.9 326 45.1
THA.LOC104813063 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 8.3e-52 208.4 329 44.4
Thhalv10006636m.g Eutrema salsugineum HOM05D005424 ORTHO05D006726 1.2e-50 204.5 270 47.8
CARHR032180 Cardamine hirsuta HOM05D005424 ORTHO05D006726 5.0e-49 199.1 267 47.2
Aa31LG6G7470 Aethionema arabicum HOM05D005424 ORTHO05D006726 4.3e-48 196.1 285 44.9
Sp1g28160 Schrenkiella parvula HOM05D005424 ORTHO05D006726 1.2e-47 194.5 268 46.3
SGA_v2.0_scaffold88G27243 Striga asiatica HOM05D005424 ORTHO05D006726 4.0e-46 189.5 254 46.5
ECA233G6131 Erigeron canadensis HOM05D005424 ORTHO05D006726 5.2e-46 189.1 317 43.8
AL1G47110 Arabidopsis lyrata HOM05D005424 ORTHO05D006726 5.7e-45 185.7 323 42.1
Carub.0001s3113 Capsella rubella HOM05D005424 ORTHO05D006726 9.8e-45 184.9 269 44.2
BcaB04g17977 Brassica carinata HOM05D005424 ORTHO05D006726 1.8e-43 180.6 265 46.4
Lsat_1_v5_gn_6_11441 Lactuca sativa HOM05D005424 ORTHO05D006726 4.1e-43 179.5 329 42.6
DCAR_009582 Daucus carota HOM05D005424 ORTHO05D006726 1.6e-42 177.6 278 47.1
unitig_699.g19549 Utricularia gibba HOM05D005424 ORTHO05D006726 1.6e-42 177.6 285 42.1
Sed0006250 Sechium edule HOM05D005424 ORTHO05D006726 1.3e-41 174.5 244 45.9
BraA08t32921Z Brassica rapa HOM05D005424 ORTHO05D006726 5.0e-41 172.6 266 46.2
AT1G32810 Arabidopsis thaliana HOM05D005424 ORTHO05D006726 8.6e-41 171.8 325 39.7
Oeu010728.1 Olea europaea HOM05D005424 ORTHO05D006726 1.9e-40 170.6 203 50.7
A08p09200 Brassica napus HOM05D005424 ORTHO05D006726 4.3e-40 169.5 257 45.9
BolC8t47971H Brassica oleracea HOM05D005424 ORTHO05D006726 4.3e-40 169.5 257 45.9
CDE11G1187 Ceratophyllum demersum HOM05D005424 ORTHO05D006726 2.8e-39 166.8 323 39.9
DCAR_019998 Daucus carota HOM05D005424 ORTHO05D006726 1.4e-38 164.5 282 44.3
BcaC07g37610 Brassica carinata HOM05D005424 ORTHO05D006726 2.6e-37 160.2 315 41.3
Ah.12g053330 Amaranthus hybridus HOM05D001091 ORTHO05D001020 2.4e-35 153.7 222 41.0
TPR.G34808 Trifolium pratense HOM05D005424 ORTHO05D006726 3.2e-35 153.3 161 56.5
HPP92_001577 Vanilla planifolia HOM05D005424 ORTHO05D006726 3.2e-35 153.3 323 35.9
SEGI_18929 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 9.2e-35 151.8 355 35.8
SHI06919 Sapria himalayana HOM05D005424 ORTHO05D006726 4.1e-27 126.3 192 44.8
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 1.3e-25 121.3 346 30.3
Os04g0221600 Oryza sativa ssp. japonica HOM05D005424 ORTHO05D006726 2.5e-24 117.1 275 33.8
Mapoly0057s0069 Marchantia polymorpha HOM05D005424 ORTHO05D006726 2.9e-20 103.6 283 33.2
SEGI_29779 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 1.9e-16 90.9 197 38.6
Oeu038526.1 Olea europaea HOM05D000700 ORTHO05D000397 3.3e-16 90.1 216 34.7
PGSC0003DMG401012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 6.0e-10 69.3 99 50.5
TAR636G2935 Trochodendron aralioides HOM05D005424 ORTHO05D006726 9.0e-06 55.5 44 65.9


User provided reference genes

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