Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 5.5e-114 414.5 230 100.0
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.5e-76 288.5 158 97.5
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.2e-75 286.2 155 98.1
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.3e-66 255.8 137 99.3
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 3.3e-18 96.3 152 42.8
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 5.6e-18 95.5 161 41.6
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 5.6e-18 95.5 156 42.9
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.1e-17 93.6 159 41.5
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 6.2e-17 92.0 155 41.3
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 8.1e-17 91.7 144 43.8
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 8.1e-17 91.7 144 41.0
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.8e-16 90.5 126 45.2
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.8e-16 90.5 172 37.8
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 1.8e-16 90.5 159 38.4
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 3.1e-16 89.7 148 39.2
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.1e-16 89.7 178 38.8
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 6.9e-16 88.6 126 44.4
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 6.9e-16 88.6 155 40.6
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 9.0e-16 88.2 165 38.8
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.2e-15 87.8 159 40.3
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.5e-15 87.4 160 39.4
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 1.5e-15 87.4 170 40.6
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.5e-15 87.4 155 40.0
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.5e-15 87.4 160 38.8
Aqoxy4G00002 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.0e-15 87.0 44 100.0
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.6e-15 86.7 136 39.7
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 7.6e-15 85.1 158 40.5
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.3e-14 84.3 147 40.8
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.7e-14 84.0 165 35.8
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.7e-14 84.0 177 37.3
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.2e-14 83.6 136 39.0
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.9e-14 83.2 174 37.9
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.9e-14 83.2 158 38.6
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 6.4e-14 82.0 152 40.1
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 8.4e-14 81.6 140 40.0
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 8.4e-14 81.6 148 38.5
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.4e-13 80.9 105 43.8
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.4e-13 80.9 162 40.7
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.4e-13 80.9 148 36.5
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.4e-13 80.9 165 33.9
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.4e-13 80.9 165 38.8
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 1.9e-13 80.5 173 36.4
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.9e-13 80.5 148 39.9
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 2.4e-13 80.1 160 35.6
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 3.2e-13 79.7 148 35.8
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 3.2e-13 79.7 148 37.8
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 4.2e-13 79.3 168 38.7
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 4.2e-13 79.3 158 38.6
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 5.4e-13 79.0 170 38.2
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 5.4e-13 79.0 154 33.8
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 5.4e-13 79.0 191 33.5
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 9.3e-13 78.2 175 36.0
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 1.2e-12 77.8 154 37.0
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.6e-12 77.4 119 42.9
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.1e-12 77.0 162 38.3
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 2.7e-12 76.6 170 35.3
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 3.5e-12 76.3 157 36.9
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 4.6e-12 75.9 154 36.4
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 4.6e-12 75.9 154 36.4
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 6.0e-12 75.5 162 36.4
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 7.9e-12 75.1 154 36.4
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 7.9e-12 75.1 159 36.5
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 7.9e-12 75.1 153 32.0
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 1.0e-11 74.7 168 38.1
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.3e-11 74.3 172 37.2
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.3e-11 74.3 182 33.0
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 1.8e-11 73.9 168 38.1
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.8e-11 73.9 155 31.0
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 3.0e-11 73.2 155 36.8
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 3.0e-11 73.2 147 38.1
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.0e-11 73.2 167 36.5
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 3.9e-11 72.8 167 32.9
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 3.9e-11 72.8 156 37.2
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 3.9e-11 72.8 138 35.5
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.9e-11 72.8 149 38.3
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 5.1e-11 72.4 155 36.8
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 5.1e-11 72.4 163 34.4
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 5.1e-11 72.4 162 35.2
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 6.7e-11 72.0 140 32.9
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 6.7e-11 72.0 128 36.7
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 8.7e-11 71.6 158 37.3
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 8.7e-11 71.6 154 37.0
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 8.7e-11 71.6 158 37.3
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 8.7e-11 71.6 162 34.6
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.9e-10 70.5 160 33.8
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 1.9e-10 70.5 139 35.3
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.9e-10 70.5 166 32.5
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.9e-10 70.5 160 34.4
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.5e-10 70.1 119 40.3
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 2.5e-10 70.1 163 33.7
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 2.5e-10 70.1 165 37.6
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 3.3e-10 69.7 161 34.8
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 3.3e-10 69.7 152 34.9
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 5.6e-10 68.9 159 34.0
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 7.4e-10 68.6 140 34.3
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 9.6e-10 68.2 114 36.8
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 9.6e-10 68.2 173 36.4
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.6e-09 67.4 148 34.5
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 2.1e-09 67.0 110 37.3
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 2.1e-09 67.0 137 37.2
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 2.1e-09 67.0 130 34.6
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 2.8e-09 66.6 163 34.4
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 3.7e-09 66.2 146 32.9
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 6.2e-09 65.5 167 31.7
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 8.1e-09 65.1 124 34.7
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.1e-08 64.7 163 34.4
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.4e-08 64.3 122 36.9
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 3.1e-08 63.2 135 33.3
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 4.0e-08 62.8 71 43.7
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 5.3e-08 62.4 223 30.0
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 9.0e-08 61.6 151 34.4
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 3.4e-07 59.7 187 32.6


User provided reference genes

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