Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 1.2e-92 343.2 171 100.0
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 4.9e-27 125.2 170 48.2
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 7.1e-26 121.3 171 45.6
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 1.6e-25 120.2 174 42.0
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 7.9e-25 117.9 175 45.1
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 1.3e-24 117.1 171 43.3
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 3.9e-24 115.5 171 40.9
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 5.1e-24 115.2 174 43.1
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 5.1e-24 115.2 174 43.1
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 1.9e-23 113.2 170 45.3
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 3.3e-23 112.5 178 42.1
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 1.4e-21 107.1 178 43.3
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.8e-21 106.7 171 40.9
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 9.0e-21 104.4 171 40.9
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 1.5e-20 103.6 169 41.4
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 1.5e-20 103.6 169 41.4
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 2.0e-20 103.2 172 40.7
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 5.8e-20 101.7 171 42.7
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 1.3e-19 100.5 175 41.1
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 1.3e-19 100.5 175 41.1
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 1.7e-19 100.1 170 40.0
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 6.5e-19 98.2 175 41.7
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 1.9e-18 96.7 145 40.7
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 2.5e-18 96.3 177 39.5
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 4.2e-18 95.5 171 38.6
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 5.5e-18 95.1 173 38.7
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 5.5e-18 95.1 150 44.0
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 5.5e-18 95.1 171 39.8
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 7.1e-18 94.7 152 42.1
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 1.2e-17 94.0 175 40.0
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 1.2e-17 94.0 170 38.2
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 1.2e-17 94.0 152 42.1
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 1.2e-17 94.0 173 38.7
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 6.0e-17 91.7 174 39.1
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 1.0e-16 90.9 170 40.0
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 1.3e-16 90.5 173 39.3
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 1.8e-16 90.1 175 38.3
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 2.3e-16 89.7 169 38.5
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 3.0e-16 89.4 171 40.4
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 3.9e-16 89.0 172 37.8
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 5.1e-16 88.6 168 38.1
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 5.1e-16 88.6 168 38.1
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 5.1e-16 88.6 168 38.1
Hund18631 Selenicereus undatus HOM05D008031 ORTHO05D010063 6.7e-16 88.2 179 40.8
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 8.7e-16 87.8 170 39.4
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.1e-15 87.4 168 36.9
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 1.1e-15 87.4 150 40.7
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 1.5e-15 87.0 170 38.8
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 1.5e-15 87.0 170 38.8
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 1.5e-15 87.0 176 38.1
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 1.9e-15 86.7 180 38.3
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 2.5e-15 86.3 184 34.8
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 5.7e-15 85.1 168 36.9
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 9.6e-15 84.3 142 40.8
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 9.6e-15 84.3 166 37.3
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 1.3e-14 84.0 157 40.8
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 1.6e-14 83.6 156 41.0
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 2.1e-14 83.2 178 38.2
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 4.8e-14 82.0 185 34.6
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 1.1e-13 80.9 175 35.4
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 3.1e-13 79.3 172 38.4
Duzib151G0929 Durio zibethinus HOM05D005099 ORTHO05D006087 5.3e-13 78.6 193 34.2
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 6.9e-13 78.2 174 36.8
MELO3C021313.2 Cucumis melo HOM05D005099 ORTHO05D006087 2.0e-12 76.6 189 34.4
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 2.0e-12 76.6 182 31.3
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 2.6e-12 76.3 192 31.8
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 2.6e-12 76.3 192 33.3
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 3.4e-12 75.9 185 34.1
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 4.5e-12 75.5 183 33.3
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 4.5e-12 75.5 190 32.6
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 4.5e-12 75.5 192 32.3
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 5.8e-12 75.1 173 36.4
Potri.010G010600 Populus trichocarpa HOM05D005099 ORTHO05D006087 5.8e-12 75.1 191 33.0
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 1.0e-11 74.3 186 33.9
PGSC0003DMG400011309 Solanum tuberosum HOM05D005099 ORTHO05D006087 1.0e-11 74.3 184 32.6
DCAR_022641 Daucus carota HOM05D008031 ORTHO05D010063 1.3e-11 73.9 177 35.6
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 1.3e-11 73.9 165 36.4
AUR62018071 Chenopodium quinoa HOM05D005099 ORTHO05D006087 1.7e-11 73.6 185 34.1
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 1.7e-11 73.6 185 33.0
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 2.2e-11 73.2 193 31.1
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 2.2e-11 73.2 200 32.5
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 2.2e-11 73.2 173 37.0
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 3.8e-11 72.4 184 35.3
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 5.0e-11 72.0 185 31.9
AUR62015274 Chenopodium quinoa HOM05D005099 ORTHO05D006087 5.0e-11 72.0 185 33.5
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 5.0e-11 72.0 194 29.9
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 8.4e-11 71.2 151 36.4
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 1.1e-10 70.9 184 34.2
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 1.9e-10 70.1 175 36.0
Sopen01g028090 Solanum pennellii HOM05D005099 ORTHO05D006087 1.9e-10 70.1 186 31.2
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 2.5e-10 69.7 163 35.0
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 3.2e-10 69.3 184 33.2
VMungo1309G2116 Vigna mungo HOM05D005099 ORTHO05D006087 3.2e-10 69.3 188 29.8
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 4.2e-10 68.9 150 34.7
Phvul.009G250300 Phaseolus vulgaris HOM05D005099 ORTHO05D006087 5.5e-10 68.6 188 31.9
ClCG06G004980 Citrullus lanatus HOM05D005099 ORTHO05D006087 9.3e-10 67.8 183 31.1
COL.COLO4_13826 Corchorus olitorius HOM05D005099 ORTHO05D006087 9.3e-10 67.8 193 32.1
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 9.3e-10 67.8 181 31.5
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 9.3e-10 67.8 182 30.2
Solyc01g066440.3 Solanum lycopersicum HOM05D005099 ORTHO05D006087 1.6e-09 67.0 189 29.1
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 2.1e-09 66.6 187 32.6
Medtr2g435810 Medicago truncatula HOM05D005099 ORTHO05D006087 2.7e-09 66.2 185 30.3
Medtr2g436150 Medicago truncatula HOM05D005099 ORTHO05D006087 2.7e-09 66.2 185 30.3
TWI73G1062 Tripterygium wilfordii HOM05D005099 ORTHO05D006087 2.7e-09 66.2 196 29.1
AT3G06840 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 3.5e-09 65.9 192 32.3
Cc03_g01550 Coffea canephora HOM05D005099 ORTHO05D006087 3.5e-09 65.9 196 30.6
Glyma.09G042500 Glycine max HOM05D005099 ORTHO05D006087 3.5e-09 65.9 186 30.1
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 6.1e-09 65.1 178 31.5
Sabra10G0006200 Salix brachista HOM05D005099 ORTHO05D006087 7.9e-09 64.7 192 30.7
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 1.0e-08 64.3 196 30.1
Glyma.15G150400 Glycine max HOM05D005099 ORTHO05D006087 3.0e-08 62.8 186 29.6
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 3.0e-08 62.8 188 34.0
Nn4g25764 Nelumbo nucifera HOM05D005099 ORTHO05D006087 3.0e-08 62.8 184 31.0
AL3G17960 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 5.1e-08 62.0 192 31.2
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 6.7e-08 61.6 187 29.9
SEGI_30103 Sequoiadendron giganteum HOM05D036824 ORTHO05D010063 6.7e-08 61.6 167 32.3
SEGI_39614 Sequoiadendron giganteum HOM05D036824 ORTHO05D010063 6.7e-08 61.6 167 32.3
MSTRG.9544 Avicennia marina HOM05D008031 ORTHO05D010063 8.7e-08 61.2 151 33.8
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 8.7e-08 61.2 114 39.5
Prupe.1G124100 Prunus persica HOM05D005099 ORTHO05D006087 1.1e-07 60.8 182 29.1
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 1.9e-07 60.1 150 30.0
Atru.chr4.2896 Acer truncatum HOM05D005099 ORTHO05D006087 3.3e-07 59.3 200 29.5
CSS0049831 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 3.3e-07 59.3 177 28.8
MD16G1164800 Malus domestica HOM05D005099 ORTHO05D006087 1.3e-06 57.4 186 26.3
CARHR081450 Cardamine hirsuta HOM05D005099 ORTHO05D006087 3.7e-06 55.8 187 29.9
DCAR_023299 Daucus carota HOM05D005099 ORTHO05D006087 4.8e-06 55.5 176 30.1


User provided reference genes

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