Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 0.0e+00 1785.8 873 100.0
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 0.0e+00 1375.5 873 75.9
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 0.0e+00 1314.7 873 73.2
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 0.0e+00 1310.8 873 73.8
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 0.0e+00 1306.2 871 72.3
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 0.0e+00 1305.0 872 71.8
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 0.0e+00 1300.8 872 71.7
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 0.0e+00 1300.8 875 71.1
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 0.0e+00 1286.9 870 70.9
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 0.0e+00 1285.8 870 70.9
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 0.0e+00 1285.8 870 70.9
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 0.0e+00 1283.5 873 71.0
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 0.0e+00 1282.7 869 70.4
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 0.0e+00 1278.1 870 70.9
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 0.0e+00 1276.9 873 70.8
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 0.0e+00 1274.6 869 70.2
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 0.0e+00 1270.8 873 70.6
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 0.0e+00 1270.8 871 70.4
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 0.0e+00 1266.5 870 70.3
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 0.0e+00 1266.1 870 70.7
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 0.0e+00 1265.4 880 70.7
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 0.0e+00 1261.5 870 70.6
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 0.0e+00 1256.5 869 69.5
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 0.0e+00 1255.4 871 69.7
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 0.0e+00 1253.4 874 70.9
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 0.0e+00 1252.3 870 69.9
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 0.0e+00 1251.1 871 69.0
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 0.0e+00 1248.8 867 69.4
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 0.0e+00 1248.0 868 68.8
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 0.0e+00 1246.5 869 69.4
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 0.0e+00 1245.3 880 68.3
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 0.0e+00 1244.6 870 69.1
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 0.0e+00 1241.9 873 69.0
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 0.0e+00 1239.9 877 68.6
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 0.0e+00 1238.4 873 68.7
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 0.0e+00 1238.0 871 68.1
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 0.0e+00 1235.3 873 68.6
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 0.0e+00 1232.2 870 68.6
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 0.0e+00 1229.5 870 68.3
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 0.0e+00 1228.8 871 69.3
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 0.0e+00 1228.8 870 67.8
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 0.0e+00 1227.2 869 67.9
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 0.0e+00 1226.1 871 68.7
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 0.0e+00 1225.3 872 66.7
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 0.0e+00 1223.8 869 67.8
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 0.0e+00 1223.0 871 67.0
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 0.0e+00 1223.0 870 67.9
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 0.0e+00 1221.1 871 67.2
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 0.0e+00 1221.1 871 68.0
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 0.0e+00 1220.3 863 67.8
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 0.0e+00 1219.9 874 68.3
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 0.0e+00 1219.5 872 67.4
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 0.0e+00 1219.5 872 67.9
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 0.0e+00 1218.8 872 67.7
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 0.0e+00 1218.0 871 67.0
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 0.0e+00 1217.2 870 67.7
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 0.0e+00 1217.2 868 68.4
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 0.0e+00 1216.8 871 67.0
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 0.0e+00 1214.5 870 67.7
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 0.0e+00 1214.1 869 67.8
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 0.0e+00 1214.1 874 66.4
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 0.0e+00 1213.7 868 67.5
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 0.0e+00 1212.2 870 67.2
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 0.0e+00 1211.8 872 67.3
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 0.0e+00 1210.3 871 67.5
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 0.0e+00 1209.1 879 67.1
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 0.0e+00 1207.6 870 67.8
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 0.0e+00 1206.0 895 66.3
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 0.0e+00 1203.7 871 66.7
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 0.0e+00 1203.3 871 66.7
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 0.0e+00 1202.6 869 67.4
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 0.0e+00 1202.6 872 67.1
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 0.0e+00 1202.2 871 66.6
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 0.0e+00 1199.5 876 66.7
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 0.0e+00 1198.7 879 66.2
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 0.0e+00 1198.3 876 66.6
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 0.0e+00 1198.3 877 66.2
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 0.0e+00 1198.0 887 65.6
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 0.0e+00 1196.8 869 66.6
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 0.0e+00 1184.5 870 65.5
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 0.0e+00 1184.1 871 66.0
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 0.0e+00 1174.8 871 65.4
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 0.0e+00 1173.3 869 67.1
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 0.0e+00 1171.8 871 65.2
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 0.0e+00 1167.1 871 65.1
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 0.0e+00 1164.4 826 68.2
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 0.0e+00 1164.4 870 64.7
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 0.0e+00 1162.1 869 65.1
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 0.0e+00 1159.4 868 64.7
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 0.0e+00 1145.6 855 65.4
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 0.0e+00 1092.8 868 60.7
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 7.2e-311 1070.5 749 69.7
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 1.3e-301 1039.6 649 75.3
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 5.7e-297 1024.2 866 59.2
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 2.7e-294 1015.4 693 69.7
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 1.1e-292 1010.0 864 55.1
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 6.8e-290 1000.7 870 59.2
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 2.3e-285 985.7 694 68.0
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 3.1e-282 975.3 874 53.9
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 6.0e-278 961.1 865 54.7
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 1.5e-276 956.4 871 53.5
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 2.8e-203 713.0 782 47.1
Actinidia38480 Actinidia chinensis HOM05D006378 ORTHO05D007959 5.4e-162 575.9 390 72.3
Zm00001eb401890 Zea mays HOM05D006378 ORTHO05D007959 5.2e-157 559.3 482 58.7
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 7.6e-140 502.3 462 54.3
FAN28G1488 Fragaria x ananassa HOM05D006378 ORTHO05D007959 3.4e-124 450.3 368 61.7
CAN.G81.12 Capsicum annuum HOM05D006378 ORTHO05D007959 5.5e-90 336.7 307 58.0
CAN.G81.10 Capsicum annuum HOM05D006378 ORTHO05D007959 7.0e-69 266.5 204 64.7
SEGI_37917 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 5.0e-67 260.4 168 72.6
Psat7g020000 Pisum sativum HOM05D006378 ORTHO05D007959 2.5e-50 204.9 161 64.0
CDE05G1577 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 6.2e-49 200.3 176 57.4
CAN.G81.11 Capsicum annuum HOM05D006378 ORTHO05D007959 3.3e-42 177.9 200 48.0
CDE05G1890 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 6.2e-41 173.7 216 45.4
Actinidia29932 Actinidia chinensis HOM05D006378 ORTHO05D007959 1.4e-29 136.0 114 57.9
SHI02337 Sapria himalayana HOM05D006378 ORTHO05D007959 7.1e-29 133.7 149 47.7
Actinidia29933 Actinidia chinensis HOM05D006378 ORTHO05D007959 2.5e-26 125.2 85 68.2
SHI02335 Sapria himalayana HOM05D006378 ORTHO05D007959 1.8e-24 119.0 90 64.4
RcHm_v2.0_Chr2g0095091 Rosa chinensis HOM05D006378 ORTHO05D007959 1.7e-22 112.5 69 76.8
RcHm_v2.0_Chr2g0095081 Rosa chinensis HOM05D006378 ORTHO05D007959 8.4e-22 110.2 87 63.2
RcHm_v2.0_Chr2g0095101 Rosa chinensis HOM05D006378 ORTHO05D007959 1.6e-20 105.9 73 65.8
SHI02336 Sapria himalayana HOM05D006378 ORTHO05D007959 6.2e-17 94.0 105 48.6
Cre06.g300250 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 1.1e-16 93.2 286 26.6
MCO11G220 Micromonas commoda HOM05D008676 ORTHO05D010936 1.6e-12 79.3 297 25.9
Mapoly0012s0012 Marchantia polymorpha HOM05D008676 ORTHO05D010936 1.3e-11 76.3 385 24.2
Cre17.g699500 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 1.8e-11 75.9 314 25.2
AagrBONN_evm.TU.Sc2ySwM_228.857 Anthoceros agrestis HOM05D008676 ORTHO05D010936 5.1e-11 74.3 316 24.1
SHI02338 Sapria himalayana HOM05D006378 ORTHO05D007959 3.3e-10 71.6 62 56.5
MCO03G450 Micromonas commoda HOM05D008676 ORTHO05D010936 5.6e-10 70.9 301 23.6
MCO05G481 Micromonas commoda HOM05D008676 ORTHO05D010936 5.6e-10 70.9 306 24.8
ATR0511G001 Amborella trichopoda HOM05D006378 ORTHO05D007959 1.6e-09 69.3 84 42.9
SMO348G0088 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 3.6e-09 68.2 303 25.1
Pp3c6_25370 Physcomitrium patens HOM05D008676 ORTHO05D010936 4.0e-08 64.7 312 26.3
PRCOL_00004385 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 4.0e-08 64.7 184 26.1
SHI02339 Sapria himalayana HOM05D006378 ORTHO05D007959 5.3e-08 64.3 95 35.8
PRCOL_00007033 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 1.2e-07 63.2 183 27.3
CBR_g54068 Chara braunii HOM05D008676 ORTHO05D010936 2.0e-07 62.4 202 25.2
SMO117G0188 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 3.4e-07 61.6 310 23.2
MCO11G738 Micromonas commoda HOM05D008676 ORTHO05D010936 4.5e-07 61.2 300 25.0
CBR_g36370 Chara braunii HOM05D008676 ORTHO05D010936 9.9e-07 60.1 70 45.7
CBR_g37950 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-06 59.7 119 31.1
AagrBONN_evm.TU.Sc2ySwM_369.291 Anthoceros agrestis HOM05D008676 ORTHO05D010936 2.2e-06 58.9 168 25.6
SMO337G0080 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 2.2e-06 58.9 156 28.2
Actinidia29934 Actinidia chinensis HOM05D006378 ORTHO05D007959 2.9e-06 58.5 32 75.0
CBR_g51027 Chara braunii HOM05D008676 ORTHO05D010936 3.8e-06 58.2 213 26.3
Cre03.g145447 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 3.8e-06 58.2 111 28.8


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