Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 4.6e-176 621.3 359 100.0
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 2.0e-147 526.2 350 84.6
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 9.4e-145 517.3 352 78.4
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 1.8e-143 513.1 352 77.3
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 5.7e-142 508.1 349 82.8
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 1.9e-137 493.0 348 80.2
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 7.4e-134 481.1 352 79.3
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 5.3e-132 474.9 345 78.6
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 9.1e-132 474.2 340 79.7
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 4.5e-131 471.9 340 74.1
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 1.7e-130 469.9 356 75.3
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 7.2e-129 464.5 354 70.9
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 4.7e-128 461.8 355 70.1
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 6.1e-128 461.5 356 69.1
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 2.3e-127 459.5 349 70.8
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 5.2e-127 458.4 356 69.4
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 8.8e-127 457.6 346 70.5
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 1.5e-126 456.8 357 68.9
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 4.4e-126 455.3 355 73.5
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 5.7e-126 454.9 340 75.3
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 9.7e-126 454.1 356 69.4
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.7e-125 453.4 356 68.3
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 1.1e-124 450.7 354 73.7
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 2.4e-124 449.5 352 69.0
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 3.1e-124 449.1 352 74.4
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 4.1e-124 448.7 345 69.6
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 7.0e-124 448.0 345 69.3
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 2.0e-123 446.4 354 68.1
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.5e-123 445.7 346 75.1
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 4.5e-123 445.3 349 74.5
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 4.5e-123 445.3 355 67.3
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.0e-122 444.1 353 67.1
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.0e-122 444.1 346 74.9
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 1.0e-122 444.1 346 71.7
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 1.3e-122 443.7 347 72.9
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 2.2e-122 443.0 352 69.0
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 2.9e-122 442.6 347 74.1
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 8.5e-122 441.0 345 68.4
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 1.5e-121 440.3 356 66.0
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 5.5e-121 438.3 347 73.8
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 7.2e-121 438.0 334 74.6
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 1.2e-120 437.2 354 73.7
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 2.7e-120 436.0 355 73.2
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.0e-119 432.6 349 73.6
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 6.7e-119 431.4 330 69.1
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 3.3e-118 429.1 354 72.0
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 7.5e-118 427.9 345 68.7
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.7e-117 426.8 346 72.8
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 2.4e-116 422.9 347 66.0
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 3.1e-116 422.5 355 70.1
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 4.1e-116 422.2 355 65.6
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 7.0e-116 421.4 353 70.0
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 9.1e-116 421.0 347 65.4
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 4.5e-115 418.7 353 69.7
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 7.7e-115 417.9 350 65.1
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 2.2e-114 416.4 349 65.9
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 2.9e-114 416.0 355 69.3
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 5.0e-114 415.2 343 63.8
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 1.5e-113 413.7 376 62.5
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 4.2e-113 412.1 318 74.8
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.7e-112 409.5 356 67.1
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.0e-111 407.5 352 63.9
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 1.0e-111 407.5 433 55.4
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 2.3e-111 406.4 331 66.2
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 4.0e-111 405.6 341 65.1
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 2.0e-110 403.3 327 68.2
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 9.8e-110 401.0 350 64.3
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.7e-109 400.2 329 65.7
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.7e-109 400.2 329 65.7
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 1.7e-109 400.2 353 62.9
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.2e-109 399.8 329 65.3
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 2.8e-109 399.4 344 63.7
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 2.8e-109 399.4 346 64.7
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 6.3e-109 398.3 344 62.2
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 1.4e-108 397.1 371 65.2
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 3.1e-108 396.0 392 59.7
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 3.1e-108 396.0 334 63.5
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 5.4e-108 395.2 346 62.1
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 1.2e-107 394.0 346 61.6
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 2.0e-107 393.3 347 68.6
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 2.0e-107 393.3 369 62.3
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 3.5e-107 392.5 345 62.9
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 3.5e-107 392.5 346 61.6
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 7.7e-107 391.3 346 61.3
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 1.3e-106 390.6 346 61.3
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 1.3e-106 390.6 346 61.3
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 2.9e-106 389.4 292 76.7
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 2.9e-106 389.4 336 70.2
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 1.1e-105 387.5 321 71.3
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 1.9e-105 386.7 278 72.7
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 5.5e-105 385.2 303 68.0
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.6e-104 383.6 336 63.7
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 1.8e-103 380.2 383 64.0
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 1.5e-102 377.1 346 62.1
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.5e-102 377.1 340 66.2
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 1.2e-99 367.5 340 66.5
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 3.5e-99 365.9 346 65.9
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 5.0e-98 362.1 301 73.1
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 2.1e-96 356.7 409 56.7
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 3.1e-95 352.8 266 77.1
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 5.8e-94 348.6 297 64.0
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 2.9e-93 346.3 295 71.5
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 6.4e-93 345.1 396 59.6
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 9.2e-92 341.3 296 62.8
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 9.2e-92 341.3 350 53.7
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.6e-91 339.0 400 52.5
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 7.3e-89 331.6 248 69.4
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 9.2e-84 314.7 244 78.3
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 6.0e-83 312.0 440 45.5
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 1.7e-82 310.5 229 69.0
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 6.8e-79 298.5 406 49.0
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 4.1e-76 289.3 235 66.4
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 2.1e-75 287.0 225 68.4
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 1.0e-74 284.6 261 64.4
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.7e-74 283.9 243 66.3
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 3.6e-72 276.2 240 68.3
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 2.7e-67 260.0 337 46.9
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 2.8e-64 250.0 302 50.7
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 2.8e-64 250.0 238 56.7
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 4.8e-64 249.2 354 43.8
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 1.4e-63 247.7 198 74.2
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 3.1e-63 246.5 204 62.3
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 2.0e-62 243.8 223 57.8
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 2.8e-56 223.4 349 40.1
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.3e-50 204.5 148 68.9
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.2e-44 183.0 129 73.6
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 1.2e-43 181.4 170 71.8
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 4.6e-43 179.5 145 62.8
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 1.8e-42 177.6 136 73.5
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 8.7e-42 175.3 216 50.0
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.9e-33 147.5 125 84.8
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 9.0e-31 138.7 357 31.7
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.8e-23 114.4 182 45.6
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 2.0e-22 110.9 218 35.3
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.3e-21 108.2 107 59.8
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.3e-21 108.2 98 63.3
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 5.5e-20 102.8 102 79.4
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 8.8e-18 95.5 78 62.8
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 1.7e-16 91.3 118 44.9
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 2.9e-13 80.5 53 77.4
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 4.7e-11 73.2 87 49.4
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 3.0e-10 70.5 50 70.0
arahy.Tifrunner.gnm1.ann1.S4WZ34 Arachis hypogaea HOM05D000237 ORTHO05D017465 6.7e-10 69.3 57 52.6
arahy.Tifrunner.gnm1.ann1.WCUD5S Arachis hypogaea HOM05D000237 ORTHO05D017465 4.4e-09 66.6 56 53.6
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 1.2e-06 58.5 129 31.0
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 2.6e-06 57.4 42 71.4


User provided reference genes

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