Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 0.0e+00 1929.5 993 100.0
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 0.0e+00 1589.3 993 80.7
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 0.0e+00 1533.1 993 78.1
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 0.0e+00 1509.6 993 75.9
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 0.0e+00 1508.0 972 78.5
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 0.0e+00 1503.8 993 76.8
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 0.0e+00 1491.9 993 75.9
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 0.0e+00 1491.9 994 75.4
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 0.0e+00 1488.0 993 75.7
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 0.0e+00 1485.7 995 75.2
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 0.0e+00 1469.9 994 74.7
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 0.0e+00 1468.4 994 74.1
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 0.0e+00 1467.2 993 75.1
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 0.0e+00 1466.1 990 73.3
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 0.0e+00 1463.4 994 74.0
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 0.0e+00 1454.9 993 73.3
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 0.0e+00 1449.9 993 73.9
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 0.0e+00 1448.0 982 74.2
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 0.0e+00 1446.4 993 73.6
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 0.0e+00 1446.4 982 73.8
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 0.0e+00 1444.5 993 72.4
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 0.0e+00 1443.7 1018 73.1
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 0.0e+00 1443.3 993 72.5
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 0.0e+00 1442.6 994 73.2
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 0.0e+00 1441.0 1004 72.1
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 0.0e+00 1438.3 971 74.5
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 0.0e+00 1437.6 993 73.1
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 0.0e+00 1436.4 996 73.0
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 0.0e+00 1436.0 993 73.7
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 0.0e+00 1436.0 996 73.6
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 0.0e+00 1435.2 993 73.4
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 0.0e+00 1434.5 993 72.8
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 0.0e+00 1434.1 993 72.7
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 0.0e+00 1432.9 993 72.2
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 0.0e+00 1429.8 988 72.8
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 0.0e+00 1429.5 993 72.0
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 0.0e+00 1428.7 997 72.4
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 0.0e+00 1427.2 994 72.5
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 0.0e+00 1426.4 993 72.5
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 0.0e+00 1425.6 994 72.3
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 0.0e+00 1424.5 993 72.8
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 0.0e+00 1421.8 993 71.6
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 0.0e+00 1421.8 993 72.0
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 0.0e+00 1417.5 993 72.4
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 0.0e+00 1416.7 993 71.9
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 0.0e+00 1415.6 993 71.6
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 0.0e+00 1413.3 994 71.2
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 0.0e+00 1412.5 995 72.3
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 0.0e+00 1411.7 995 71.8
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 0.0e+00 1410.2 994 71.9
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 0.0e+00 1409.8 1076 67.8
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 0.0e+00 1407.5 993 71.9
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 0.0e+00 1407.1 1007 71.6
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 0.0e+00 1406.7 993 70.9
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 0.0e+00 1405.6 994 72.1
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 0.0e+00 1403.3 994 71.5
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 0.0e+00 1401.0 994 70.8
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 0.0e+00 1400.2 998 71.1
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 0.0e+00 1399.4 1000 72.5
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 0.0e+00 1399.0 963 71.9
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 0.0e+00 1397.1 993 70.4
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 0.0e+00 1395.9 993 70.1
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 0.0e+00 1393.6 993 70.7
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 0.0e+00 1392.1 994 71.4
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 0.0e+00 1390.9 993 70.7
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 0.0e+00 1390.2 994 71.7
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 0.0e+00 1390.2 993 70.6
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 0.0e+00 1386.3 965 72.5
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 0.0e+00 1382.5 965 72.2
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 0.0e+00 1378.6 994 70.2
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 0.0e+00 1373.2 994 69.9
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 0.0e+00 1372.5 994 70.0
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 0.0e+00 1372.1 993 69.3
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 0.0e+00 1369.0 900 75.8
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 0.0e+00 1368.6 964 72.2
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 0.0e+00 1365.1 993 68.8
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 0.0e+00 1364.7 993 70.4
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 0.0e+00 1363.2 997 69.2
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 0.0e+00 1362.8 993 69.0
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 0.0e+00 1359.4 993 69.4
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 0.0e+00 1358.2 993 69.2
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 0.0e+00 1354.0 995 69.8
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 0.0e+00 1352.0 982 69.8
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 0.0e+00 1352.0 982 69.8
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 0.0e+00 1341.6 994 69.2
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 0.0e+00 1333.5 995 68.1
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 0.0e+00 1330.9 995 67.9
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 0.0e+00 1326.2 971 68.1
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 0.0e+00 1318.9 994 67.6
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 0.0e+00 1317.8 995 67.7
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 0.0e+00 1315.8 996 68.0
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 0.0e+00 1309.3 994 67.4
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 0.0e+00 1300.8 921 71.2
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 0.0e+00 1294.3 997 66.0
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 0.0e+00 1293.9 941 70.9
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 0.0e+00 1292.3 993 67.1
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 0.0e+00 1282.3 1027 64.3
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 0.0e+00 1276.2 967 68.5
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 0.0e+00 1271.9 993 66.2
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 0.0e+00 1271.5 993 64.1
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 0.0e+00 1193.7 864 71.3
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 0.0e+00 1187.9 915 67.2
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 0.0e+00 1165.6 1001 62.3
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 0.0e+00 1105.1 993 57.7
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 4.1e-307 1058.1 726 74.1
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 4.2e-296 1021.5 915 60.5
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 7.2e-296 1020.8 1001 53.6
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 1.0e-294 1016.9 1001 53.4
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 5.0e-289 998.0 1001 52.0
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 8.5e-289 997.3 1002 51.1
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 8.8e-286 987.3 998 49.9
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.6e-274 949.9 613 76.8
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 2.3e-270 936.0 844 58.5
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.0e-270 935.3 600 77.2
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.3e-265 920.2 743 63.4
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 3.9e-257 892.1 986 47.2
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 6.6e-257 891.3 808 56.4
FAN05G3283 Fragaria x ananassa HOM05D005576 ORTHO05D007010 5.2e-238 828.6 610 69.3
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 2.8e-215 753.1 886 44.7
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 2.6e-213 746.5 1081 38.6
Cpa.g.sc589.4 Carica papaya HOM05D005576 ORTHO05D007010 2.0e-173 614.0 428 71.7
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 2.3e-145 520.8 304 82.2
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 1.2e-144 518.5 314 79.3
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 4.4e-144 516.5 358 71.5
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 2.4e-121 441.0 1191 28.7
Actinidia26823 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.1e-89 335.9 265 64.5
Actinidia27734 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.1e-89 335.9 265 64.5
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 4.5e-80 303.9 1075 26.7
HPP92_026305 Vanilla planifolia HOM05D005576 ORTHO05D007010 2.5e-54 218.4 241 47.7
PRCOL_00005439 Prasinoderma coloniale HOM05D005576 ORTHO05D007010 3.8e-39 167.9 949 22.0
C02p30110 Brassica napus HOM05D005576 ORTHO05D007010 1.1e-30 139.8 145 49.7
BcaB05g24764 Brassica carinata HOM05D005576 ORTHO05D007010 1.5e-30 139.4 122 63.9
BolC2t09060H Brassica oleracea HOM05D005576 ORTHO05D007010 1.7e-26 125.9 144 47.2
unitig_899.g14765 Utricularia gibba HOM05D005576 ORTHO05D007010 1.6e-24 119.4 109 55.0
BcaB05g24763 Brassica carinata HOM05D000046 ORTHO05D000457 6.2e-21 107.5 85 58.8
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 5.4e-17 94.4 64 73.4
A02p18080 Brassica napus HOM05D005576 ORTHO05D041195 3.0e-07 62.0 45 73.3
BraA02t06855Z Brassica rapa HOM05D005576 ORTHO05D041195 3.0e-07 62.0 45 73.3
Pp3c1_21110 Physcomitrium patens HOM05D002636 ORTHO05D003490 1.9e-06 59.3 256 23.4
Pp3c1_21114 Physcomitrium patens HOM05D002636 ORTHO05D003490 1.9e-06 59.3 256 23.4
THA.LOC104820879 Tarenaya hassleriana HOM05D002636 ORTHO05D003490 9.6e-06 57.0 256 21.9


User provided reference genes

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