Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 1.4e-220 769.2 374 100.0
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 1.5e-124 450.3 377 59.2
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 1.1e-119 434.1 377 57.6
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 1.4e-114 417.2 386 56.0
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 1.1e-111 407.5 376 54.0
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 1.7e-109 400.2 376 53.7
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 5.1e-109 398.7 376 53.7
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 2.5e-108 396.4 375 51.2
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 3.3e-108 396.0 379 52.8
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 9.5e-108 394.4 377 52.3
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 2.1e-107 393.3 375 54.4
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 2.8e-107 392.9 378 53.7
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 6.2e-107 391.7 377 52.5
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 1.1e-106 391.0 376 54.0
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 1.8e-106 390.2 376 54.0
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 2.6e-105 386.3 378 51.6
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 5.8e-105 385.2 375 52.8
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 1.3e-104 384.0 376 51.3
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 1.7e-104 383.6 369 52.6
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 3.7e-104 382.5 376 51.9
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 4.9e-104 382.1 376 52.7
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 6.4e-104 381.7 377 52.0
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 1.4e-103 380.6 374 51.9
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 7.1e-103 378.3 380 49.2
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 4.6e-102 375.6 374 52.7
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 2.3e-101 373.2 376 51.3
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 5.1e-101 372.1 379 53.3
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 5.1e-101 372.1 369 53.1
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 4.3e-100 369.0 377 52.3
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 1.2e-99 367.5 377 49.9
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 2.1e-99 366.7 378 50.8
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 2.8e-99 366.3 377 50.4
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 4.7e-99 365.5 380 48.7
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 1.4e-98 364.0 379 50.4
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 1.8e-98 363.6 380 48.4
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.6e-97 359.8 376 49.5
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 3.4e-97 359.4 374 50.5
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 4.4e-97 359.0 378 50.5
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 9.9e-97 357.8 377 52.0
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 1.3e-96 357.5 382 47.6
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 1.1e-95 354.4 378 50.8
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 1.4e-95 354.0 379 50.9
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 4.2e-95 352.4 376 51.9
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 5.4e-95 352.1 378 52.6
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 1.2e-94 350.9 378 49.2
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 6.0e-94 348.6 376 48.9
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 7.8e-94 348.2 350 50.6
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 7.8e-94 348.2 376 46.5
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 7.8e-94 348.2 377 48.5
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 7.8e-94 348.2 375 48.8
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 1.7e-93 347.1 377 50.1
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 5.1e-93 345.5 420 46.0
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 8.7e-93 344.7 373 46.9
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 2.1e-91 340.1 373 46.4
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 3.6e-91 339.3 381 49.1
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 6.2e-91 338.6 372 52.2
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 4.0e-90 335.9 387 47.5
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 1.5e-89 334.0 368 48.1
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 4.4e-89 332.4 383 49.1
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.2e-88 330.1 368 47.8
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 1.1e-87 327.8 374 49.5
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 3.2e-87 326.2 377 46.9
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 7.1e-87 325.1 378 47.4
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 2.1e-86 323.6 380 46.6
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 2.7e-86 323.2 391 46.5
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 4.6e-86 322.4 371 47.2
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 1.7e-85 320.5 376 44.9
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 3.0e-85 319.7 373 47.7
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 5.1e-85 318.9 376 44.9
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 6.6e-85 318.5 377 45.1
FvH4_1g22740 Fragaria vesca HOM05D006130 ORTHO05D007491 8.7e-85 318.2 318 51.6
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 8.7e-85 318.2 383 46.0
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 2.5e-84 316.6 282 59.9
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 3.6e-83 312.8 383 45.4
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 4.8e-83 312.4 391 46.8
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 1.4e-82 310.8 375 46.7
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 6.9e-82 308.5 352 46.9
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 1.2e-81 307.8 384 44.3
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 1.2e-81 307.8 386 46.9
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 1.5e-81 307.4 383 46.5
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.4e-79 300.8 368 44.6
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 2.4e-79 300.1 383 43.9
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 5.1e-77 292.4 398 42.2
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 6.7e-77 292.0 374 43.3
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 6.7e-77 292.0 379 44.6
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 1.9e-76 290.4 381 41.7
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 7.4e-76 288.5 391 41.9
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 1.3e-75 287.7 307 50.5
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 1.6e-75 287.3 379 41.7
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 6.2e-75 285.4 384 41.7
GSVIVG01022231001 Vitis vinifera HOM05D006130 ORTHO05D007491 2.4e-74 283.5 372 43.3
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 6.9e-74 282.0 382 43.5
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 9.9e-73 278.1 378 41.3
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 1.3e-72 277.7 382 43.2
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 1.3e-72 277.7 379 43.3
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.3e-72 277.7 376 42.0
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 1.7e-72 277.3 400 40.2
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 3.2e-71 273.1 381 41.2
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 2.1e-70 270.4 358 46.1
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 3.5e-70 269.6 379 42.0
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 4.6e-70 269.2 377 42.2
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 6.0e-70 268.9 379 42.0
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 1.0e-69 268.1 262 53.4
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.6e-67 260.8 349 42.1
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 1.4e-66 257.7 392 41.1
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 4.9e-64 249.2 369 41.5
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 5.5e-63 245.7 384 41.1
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 2.7e-62 243.4 413 36.8
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 5.7e-60 235.7 406 36.9
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 6.9e-58 228.8 287 49.1
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-54 216.9 215 53.5
Glyma.06G147000 Glycine max HOM05D006130 ORTHO05D007491 2.8e-51 206.8 222 48.2
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 5.0e-48 196.1 373 32.4
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 5.5e-47 192.6 174 54.0
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 2.0e-41 174.1 479 29.9
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 4.5e-41 172.9 287 38.0
AagrBONN_evm.TU.Sc2ySwM_228.1847 Anthoceros agrestis HOM05D006130 ORTHO05D007491 4.1e-34 149.8 138 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis HOM05D006130 ORTHO05D007491 1.1e-23 115.2 91 56.0
SGA_v2.0_scaffold34G13625 Striga asiatica HOM05D006130 ORTHO05D007491 1.6e-22 111.3 88 59.1
Actinidia35264 Actinidia chinensis HOM05D006130 ORTHO05D007491 2.3e-21 107.5 87 55.2
MCO11G927 Micromonas commoda HOM05D006130 ORTHO05D007491 4.5e-17 93.2 446 25.3
SGA_v2.0_scaffold32G12965 Striga asiatica HOM05D006130 ORTHO05D007491 6.1e-14 82.8 79 54.4
Cre14.g608500 Chlamydomonas reinhardtii HOM05D006130 ORTHO05D007491 1.1e-10 72.0 118 32.2
DCAR_006919 Daucus carota HOM05D005189 ORTHO05D006093 4.1e-10 70.1 362 25.1
MBI19_g05150_MAGBIO Magnolia biondii HOM05D005189 ORTHO05D006093 5.4e-10 69.7 380 23.7
DCAR_005781 Daucus carota HOM05D005189 ORTHO05D006093 7.0e-10 69.3 362 24.9
ClCG03G014110 Citrullus lanatus HOM05D005189 ORTHO05D006093 3.5e-09 67.0 382 23.0
DCAR_022674 Daucus carota HOM05D005189 ORTHO05D006093 4.5e-09 66.6 343 24.2
AUR62011856 Chenopodium quinoa HOM05D005189 ORTHO05D006093 1.7e-08 64.7 358 24.3
HanXRQChr04g0111211 Helianthus annuus HOM05D005189 ORTHO05D006093 2.3e-08 64.3 350 24.3
Os03g0300200 Oryza sativa ssp. japonica HOM05D005189 ORTHO05D006093 2.9e-08 63.9 364 23.1
ECA236G2822 Erigeron canadensis HOM05D000141 ORTHO05D000780 3.9e-08 63.5 339 23.6
PSO782G1813 Papaver somniferum HOM05D005189 ORTHO05D006093 3.9e-08 63.5 357 24.6
Pp3c22_7380 Physcomitrium patens HOM05D005189 ORTHO05D006093 3.9e-08 63.5 412 22.3
Cre03.g149500 Chlamydomonas reinhardtii HOM05D005189 ORTHO05D006093 5.0e-08 63.2 120 36.7
MELO3C015632.2 Cucumis melo HOM05D005189 ORTHO05D006093 6.6e-08 62.8 381 23.1
CARHR250440 Cardamine hirsuta HOM05D005189 ORTHO05D006093 1.9e-07 61.2 105 38.1
Gohir.A11G162200 Gossypium hirsutum HOM05D005189 ORTHO05D006093 1.9e-07 61.2 376 22.3
Gorai.007G180000 Gossypium raimondii HOM05D005189 ORTHO05D006093 1.9e-07 61.2 376 22.1
Zm00001eb396540 Zea mays HOM05D005189 ORTHO05D006093 1.9e-07 61.2 363 23.7
PGR044G0984 Punica granatum HOM05D005189 ORTHO05D006093 2.5e-07 60.8 386 23.6
PGR047G0002 Punica granatum HOM05D005189 ORTHO05D006093 2.5e-07 60.8 386 23.6
Duzib128G0399 Durio zibethinus HOM05D005189 ORTHO05D006093 3.3e-07 60.5 374 22.2
Gohir.D11G168500 Gossypium hirsutum HOM05D005189 ORTHO05D006093 4.3e-07 60.1 376 21.8
Sed0013075 Sechium edule HOM05D005189 ORTHO05D006093 4.3e-07 60.1 381 23.4
Migut.D00121 Erythranthe guttata HOM05D005189 ORTHO05D006093 7.3e-07 59.3 367 24.3
EL10Ac2g03409 Beta vulgaris HOM05D005189 ORTHO05D006093 9.5e-07 58.9 370 20.8
Rhsim13G0007900 Rhododendron simsii HOM05D005189 ORTHO05D006093 9.5e-07 58.9 382 25.1
Sp6g02120 Schrenkiella parvula HOM05D005189 ORTHO05D006093 9.5e-07 58.9 104 36.5
CAN.G1987.2 Capsicum annuum HOM05D005189 ORTHO05D006093 1.6e-06 58.2 105 32.4
AT4G02220 Arabidopsis thaliana HOM05D005189 ORTHO05D006093 2.1e-06 57.8 374 24.3
Dinv10045 Davidia involucrata HOM05D003197 ORTHO05D006093 2.1e-06 57.8 364 23.9
Oeu028521.1 Olea europaea HOM05D006130 ORTHO05D007491 2.1e-06 57.8 31 74.2
Thhalv10028689m.g Eutrema salsugineum HOM05D005189 ORTHO05D006093 2.8e-06 57.4 374 23.3
unitig_22.g5230 Utricularia gibba HOM05D005189 ORTHO05D006093 2.8e-06 57.4 385 21.8
AL6G50910 Arabidopsis lyrata HOM05D005189 ORTHO05D006093 6.1e-06 56.2 372 23.9
Carub.0006s3494 Capsella rubella HOM05D005189 ORTHO05D006093 6.1e-06 56.2 372 23.9
AUR62024701 Chenopodium quinoa HOM05D005189 ORTHO05D006093 6.1e-06 56.2 353 22.9
Ciclev10020359m.g Citrus clementina HOM05D005189 ORTHO05D006093 6.1e-06 56.2 364 23.6
Oeu021746.1 Olea europaea HOM05D005189 ORTHO05D006093 6.1e-06 56.2 108 30.6
Nn8g40249 Nelumbo nucifera HOM05D005189 ORTHO05D006093 8.0e-06 55.8 342 23.7


User provided reference genes

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