Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G04012 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 3.6e-91 338.2 168 100.0
Aqoxy7G04015 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 2.8e-67 258.8 363 46.3
MBI05_g40673_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.2e-32 142.9 356 28.7
MBI05_g40674_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 9.1e-26 120.9 349 27.5
PSO063G3496 Papaver somniferum HOM05D003596 ORTHO05D004256 2.7e-22 109.4 85 57.6
PSO832G4098 Papaver somniferum HOM05D003596 ORTHO05D004256 1.0e-21 107.5 85 56.5
MBI07_g28657_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 8.8e-21 104.4 107 47.7
MBI05_g21322_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.7e-19 99.0 110 47.3
PSO386G0091 Papaver somniferum HOM05D003596 ORTHO05D004256 7.7e-17 91.3 85 47.1
Aqoxy7G01445 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 6.6e-16 88.2 91 42.9
MBI11_g17711_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.8e-13 80.1 75 49.3
PSO832G4001 Papaver somniferum HOM05D003596 ORTHO05D004256 2.3e-13 79.7 103 36.9
MBI05_g18185_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.0e-13 79.3 246 25.6
PSO063G4959 Papaver somniferum HOM05D003596 ORTHO05D004256 4.0e-13 79.0 103 35.9
ClCG05G018100 Citrullus lanatus HOM05D003596 ORTHO05D004256 8.9e-13 77.8 86 46.5
MELO3C016892.2 Cucumis melo HOM05D003596 ORTHO05D004256 1.2e-12 77.4 64 54.7
CsaV3_4G035870 Cucumis sativus L. HOM05D003596 ORTHO05D004256 1.2e-12 77.4 64 54.7
PSO210G3757 Papaver somniferum HOM05D003596 ORTHO05D004256 2.6e-12 76.3 64 53.1
PSO210G4954 Papaver somniferum HOM05D003596 ORTHO05D004256 2.6e-12 76.3 64 53.1
Aqoxy7G03993 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 3.4e-12 75.9 64 54.7
Os06g0574100 Oryza sativa ssp. japonica HOM05D003596 ORTHO05D004256 3.4e-12 75.9 64 53.1
AL7G39850 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 4.4e-12 75.5 74 48.6
A01p05090 Brassica napus HOM05D003596 ORTHO05D004256 4.4e-12 75.5 74 48.6
A03p61780 Brassica napus HOM05D003596 ORTHO05D004256 4.4e-12 75.5 74 48.6
C07p59490 Brassica napus HOM05D003596 ORTHO05D004256 4.4e-12 75.5 74 48.6
BraA01t00492Z Brassica rapa HOM05D003596 ORTHO05D004256 4.4e-12 75.5 74 48.6
BraA03t15215Z Brassica rapa HOM05D003596 ORTHO05D004256 4.4e-12 75.5 74 48.6
HanXRQChr03g0071431 Helianthus annuus HOM05D003596 ORTHO05D004256 4.4e-12 75.5 64 53.1
Prupe.1G407700 Prunus persica HOM05D003596 ORTHO05D004256 4.4e-12 75.5 64 54.7
PSO384G1072 Papaver somniferum HOM05D003596 ORTHO05D004256 5.7e-12 75.1 105 33.3
Sed0005044 Sechium edule HOM05D003596 ORTHO05D004256 5.7e-12 75.1 64 54.7
Solyc08g062610.4 Solanum lycopersicum HOM05D003596 ORTHO05D004256 5.7e-12 75.1 65 53.8
Sopen08g018080 Solanum pennellii HOM05D003596 ORTHO05D004256 5.7e-12 75.1 64 56.2
Sopen08g018130 Solanum pennellii HOM05D003596 ORTHO05D004256 5.7e-12 75.1 64 56.2
AL7G18450 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 7.5e-12 74.7 66 51.5
Thhalv10025572m.g Eutrema salsugineum HOM05D003596 ORTHO05D004256 7.5e-12 74.7 64 53.1
Aa31LG7G10160 Aethionema arabicum HOM05D003596 ORTHO05D004256 9.8e-12 74.3 66 47.0
AL6G32760 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 9.8e-12 74.3 74 47.3
AT4G33110 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 9.8e-12 74.3 66 50.0
arahy.Tifrunner.gnm1.ann1.YCFU7L Arachis hypogaea HOM05D003596 ORTHO05D004256 9.8e-12 74.3 64 51.6
EL10Ac2g03812 Beta vulgaris HOM05D003596 ORTHO05D004256 9.8e-12 74.3 64 50.0
CAN.G143.21 Capsicum annuum HOM05D003596 ORTHO05D004256 9.8e-12 74.3 64 53.1
AUR62009106 Chenopodium quinoa HOM05D003596 ORTHO05D004256 9.8e-12 74.3 64 51.6
AUR62020561 Chenopodium quinoa HOM05D003596 ORTHO05D004256 9.8e-12 74.3 64 51.6
PSO384G1609 Papaver somniferum HOM05D003596 ORTHO05D004256 9.8e-12 74.3 105 33.3
Ah.10g034070 Amaranthus hybridus HOM05D003596 ORTHO05D004256 1.3e-11 73.9 64 51.6
COL.COLO4_21105 Corchorus olitorius HOM05D003596 ORTHO05D004256 1.3e-11 73.9 66 51.5
Migut.A00103 Erythranthe guttata HOM05D003596 ORTHO05D004256 1.3e-11 73.9 64 51.6
SGA_v2.0_scaffold64G21855 Striga asiatica HOM05D003596 ORTHO05D004256 1.3e-11 73.9 64 51.6
THA.LOC104803717 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 1.3e-11 73.9 64 51.6
MSTRG.25976 Avicennia marina HOM05D003596 ORTHO05D004256 1.7e-11 73.6 83 45.8
BolC7t46393H Brassica oleracea HOM05D003596 ORTHO05D004256 1.7e-11 73.6 64 51.6
Nitab4.5_0002797g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 1.7e-11 73.6 64 53.1
BcaC09g52108 Brassica carinata HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 51.6
C01p05570 Brassica napus HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 51.6
BolC1t00537H Brassica oleracea HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 51.6
Carub.0007s0734 Capsella rubella HOM05D003596 ORTHO05D004256 2.2e-11 73.2 66 50.0
Lsat_1_v5_gn_7_60761 Lactuca sativa HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 51.6
SEGI_31297 Sequoiadendron giganteum HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 50.0
Sopen08g018090 Solanum pennellii HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 54.7
TPR.G3519 Trifolium pratense HOM05D003596 ORTHO05D004256 2.2e-11 73.2 64 51.6
CANSAT21G2424 Cannabis sativa HOM05D003596 ORTHO05D004256 2.9e-11 72.8 64 53.1
MD15G1054300 Malus domestica HOM05D003596 ORTHO05D004256 2.9e-11 72.8 64 53.1
PSO386G0153 Papaver somniferum HOM05D003596 ORTHO05D004256 2.9e-11 72.8 85 40.0
Potri.018G060000 Populus trichocarpa HOM05D003596 ORTHO05D004256 2.9e-11 72.8 64 50.0
VMungo1309G0065 Vigna mungo HOM05D003596 ORTHO05D004256 2.9e-11 72.8 64 51.6
Actinidia29320 Actinidia chinensis HOM05D003596 ORTHO05D004256 3.7e-11 72.4 69 49.3
AUR62020565 Chenopodium quinoa HOM05D003596 ORTHO05D004256 3.7e-11 72.4 64 50.0
Ciclev10008761m.g Citrus clementina HOM05D003596 ORTHO05D004256 3.7e-11 72.4 64 50.0
Lj1g0007600 Lotus japonicus HOM05D003596 ORTHO05D004256 3.7e-11 72.4 64 50.0
PSO339G1340 Papaver somniferum HOM05D003596 ORTHO05D004256 3.7e-11 72.4 112 33.0
PSO832G1397 Papaver somniferum HOM05D003596 ORTHO05D004256 3.7e-11 72.4 105 34.3
CARHR241140 Cardamine hirsuta HOM05D003596 ORTHO05D004256 4.9e-11 72.0 66 50.0
Mapoly0103s0018 Marchantia polymorpha HOM05D003596 ORTHO05D004256 4.9e-11 72.0 74 43.2
PSO210G3791 Papaver somniferum HOM05D003596 ORTHO05D004256 4.9e-11 72.0 64 50.0
PSO229G0119 Papaver somniferum HOM05D003596 ORTHO05D004256 4.9e-11 72.0 112 33.0
Phvul.009G079900 Phaseolus vulgaris HOM05D003596 ORTHO05D004256 4.9e-11 72.0 64 51.6
BolC7t46392H Brassica oleracea HOM05D003596 ORTHO05D004256 6.4e-11 71.6 74 44.6
CSS0012931 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 6.4e-11 71.6 74 47.3
CSS0037935 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 6.4e-11 71.6 74 47.3
Ca_15814_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 6.4e-11 71.6 64 51.6
Ca_15848_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 6.4e-11 71.6 64 51.6
Glyma.06G054400 Glycine max HOM05D003596 ORTHO05D004256 6.4e-11 71.6 74 45.9
Oeu018037.2 Olea europaea HOM05D003596 ORTHO05D004256 6.4e-11 71.6 64 48.4
Rhsim05G0069300 Rhododendron simsii HOM05D003596 ORTHO05D004256 6.4e-11 71.6 66 51.5
SalBow4G3232 Salvia bowleyana HOM05D003596 ORTHO05D004256 6.4e-11 71.6 64 50.0
Sp7g30860 Schrenkiella parvula HOM05D003596 ORTHO05D004256 6.4e-11 71.6 74 47.3
BcaC09g52112 Brassica carinata HOM05D003596 ORTHO05D004256 8.3e-11 71.2 64 51.6
Gohir.A05G040250 Gossypium hirsutum HOM05D003596 ORTHO05D004256 8.3e-11 71.2 74 47.3
Psat5g035520 Pisum sativum HOM05D003596 ORTHO05D004256 8.3e-11 71.2 64 51.6
QL02p000417 Quercus lobata HOM05D003596 ORTHO05D004256 8.3e-11 71.2 64 50.0
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 8.3e-11 71.2 64 50.0
MELO3C016893.2 Cucumis melo HOM05D003596 ORTHO05D004256 1.1e-10 70.9 64 51.6
Glyma.04G054100 Glycine max HOM05D003596 ORTHO05D004256 1.1e-10 70.9 64 50.0
Manes.16G083300 Manihot esculenta HOM05D003596 ORTHO05D004256 1.1e-10 70.9 64 50.0
Nitab4.5_0006016g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 1.4e-10 70.5 64 51.6
unitig_748.g7532 Utricularia gibba HOM05D003596 ORTHO05D004256 1.4e-10 70.5 74 44.6
Cc08_g11040 Coffea canephora HOM05D003596 ORTHO05D004256 2.4e-10 69.7 64 50.0
Duzib150G0181 Durio zibethinus HOM05D003596 ORTHO05D004256 2.4e-10 69.7 64 50.0
PGR031G3048 Punica granatum HOM05D003596 ORTHO05D004256 2.4e-10 69.7 64 48.4
Sabra18G0052600 Salix brachista HOM05D003596 ORTHO05D004256 2.4e-10 69.7 64 48.4
Hund03308 Selenicereus undatus HOM05D003596 ORTHO05D004256 2.4e-10 69.7 64 48.4
Thecc.09G058900 Theobroma cacao HOM05D003596 ORTHO05D004256 2.4e-10 69.7 64 50.0
vmacro17443 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 2.4e-10 69.7 66 48.5
vmacro22567 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 2.4e-10 69.7 66 48.5
Eucgr.C00673 Eucalyptus grandis HOM05D003596 ORTHO05D004256 3.2e-10 69.3 64 51.6
Gohir.A05G040200 Gossypium hirsutum HOM05D003596 ORTHO05D004256 3.2e-10 69.3 66 48.5
Gohir.D05G041700 Gossypium hirsutum HOM05D003596 ORTHO05D004256 3.2e-10 69.3 66 48.5
PSO063G0821 Papaver somniferum HOM05D003596 ORTHO05D004256 3.2e-10 69.3 85 40.0
THA.LOC104803716 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 3.2e-10 69.3 64 51.6
CiPaw.15G035400 Carya illinoinensis HOM05D003596 ORTHO05D004256 4.1e-10 68.9 73 46.6
Medtr3g104740 Medicago truncatula HOM05D003596 ORTHO05D004256 4.1e-10 68.9 124 34.7
Sopen08g018100 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-10 68.9 75 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2988 Anthoceros agrestis HOM05D003596 ORTHO05D004256 5.4e-10 68.6 64 45.3
Cpa.g.sc91.83 Carica papaya HOM05D003596 ORTHO05D004256 5.4e-10 68.6 63 47.6
CDE02G3165 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 5.4e-10 68.6 64 50.0
Nn8g38751 Nelumbo nucifera HOM05D003596 ORTHO05D004256 5.4e-10 68.6 93 39.8
Zm00001eb385240 Zea mays HOM05D003596 ORTHO05D004256 5.4e-10 68.6 64 48.4
CSS0026815 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 7.0e-10 68.2 66 48.5
DCAR_003143 Daucus carota HOM05D003596 ORTHO05D004256 7.0e-10 68.2 64 45.3
FvH4_2g31420 Fragaria vesca HOM05D003596 ORTHO05D004256 7.0e-10 68.2 64 50.0
FAN15G0358 Fragaria x ananassa HOM05D003596 ORTHO05D004256 7.0e-10 68.2 64 50.0
AT4G33120 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 1.2e-09 67.4 74 43.2
Gorai.009G042400 Gossypium raimondii HOM05D003596 ORTHO05D004256 1.2e-09 67.4 66 47.0
Hma1.2p1_0732F.1_g210080 Hydrangea macrophylla HOM05D003596 ORTHO05D004256 1.2e-09 67.4 64 51.6
Lj8C494T3 Lonicera japonica HOM05D003596 ORTHO05D004256 1.2e-09 67.4 64 48.4
Lj1g0006265 Lotus japonicus HOM05D003596 ORTHO05D004256 1.2e-09 67.4 64 46.9
Lalb_Chr08g0244911 Lupinus albus HOM05D003596 ORTHO05D004256 1.2e-09 67.4 64 48.4
RcHm_v2.0_Chr6g0311401 Rosa chinensis HOM05D003596 ORTHO05D004256 1.2e-09 67.4 64 50.0
GSVIVG01035424001 Vitis vinifera HOM05D003596 ORTHO05D004256 1.2e-09 67.4 65 49.2
ATR0051G014 Amborella trichopoda HOM05D003596 ORTHO05D004256 1.6e-09 67.0 93 39.8
Cfa017996 Carpinus fangiana HOM05D003596 ORTHO05D004256 1.6e-09 67.0 64 48.4
Haze_18139 Corylus avellana HOM05D003596 ORTHO05D004256 1.6e-09 67.0 64 48.4
MBI05_g38197_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.0e-09 66.6 61 50.8
PSO675G3982 Papaver somniferum HOM05D003596 ORTHO05D004256 2.0e-09 66.6 97 34.0
PSO675G8489 Papaver somniferum HOM05D003596 ORTHO05D004256 2.0e-09 66.6 97 34.0
ECA240G3089 Erigeron canadensis HOM05D003596 ORTHO05D004256 2.7e-09 66.2 58 51.7
FAN24G3537 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.7e-09 66.2 64 48.4
CiPaw.15G034900 Carya illinoinensis HOM05D003596 ORTHO05D004256 3.5e-09 65.9 64 48.4
Dinv12460 Davidia involucrata HOM05D003596 ORTHO05D004256 3.5e-09 65.9 93 40.9
Psat5g035440 Pisum sativum HOM05D003596 ORTHO05D004256 3.5e-09 65.9 131 32.8
Psat5g131440 Pisum sativum HOM05D003596 ORTHO05D004256 3.5e-09 65.9 131 33.6
TWI63G1485 Tripterygium wilfordii HOM05D003596 ORTHO05D004256 4.6e-09 65.5 93 39.8
CiPaw.15G035100 Carya illinoinensis HOM05D003596 ORTHO05D004256 5.9e-09 65.1 64 48.4
Gorai.009G042500 Gossypium raimondii HOM05D003596 ORTHO05D004256 5.9e-09 65.1 66 47.0
Cc00_g33530 Coffea canephora HOM05D003596 ORTHO05D004256 7.8e-09 64.7 84 41.7
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 1.7e-08 63.5 69 44.9
CBR_g6365 Chara braunii HOM05D003596 ORTHO05D004256 1.7e-08 63.5 64 42.2
Sc06g0001060 Simmondsia chinensis HOM05D003596 ORTHO05D004256 2.3e-08 63.2 64 50.0
SMO271G0076 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 3.0e-08 62.8 63 36.5
Pp3c17_22760 Physcomitrium patens HOM05D003596 ORTHO05D004256 3.9e-08 62.4 64 48.4
HPP92_024003 Vanilla planifolia HOM05D003596 ORTHO05D004256 6.6e-08 61.6 105 34.3
arahy.Tifrunner.gnm1.ann1.N0QBSQ Arachis hypogaea HOM05D003596 ORTHO05D004256 8.6e-08 61.2 93 37.6
Peaxi162Scf00070g00020 Petunia axillaris HOM05D003596 ORTHO05D004256 8.6e-08 61.2 56 50.0
HPP92_023980 Vanilla planifolia HOM05D003596 ORTHO05D004256 8.6e-08 61.2 64 43.8
Atru.chr7.1894 Acer truncatum HOM05D003596 ORTHO05D004256 2.5e-07 59.7 84 39.3
Atru.chr7.1921 Acer truncatum HOM05D003596 ORTHO05D004256 2.5e-07 59.7 84 39.3
Lj8A493G26 Lonicera japonica HOM05D003596 ORTHO05D004256 2.5e-07 59.7 64 45.3
MBI05_g21326_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D002168 3.6e-06 55.8 60 43.3


User provided reference genes

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