Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 8.8e-221 770.0 394 100.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.5e-175 619.8 387 82.2
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.6e-175 617.8 387 82.4
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 5.8e-172 607.8 393 80.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.2e-171 605.9 394 80.5
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.1e-170 603.6 376 82.2
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.2e-166 590.1 382 80.4
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.8e-165 586.3 367 78.2
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.2e-164 583.6 364 82.1
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 4.4e-164 581.6 390 74.9
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.6e-164 580.9 347 82.7
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 9.9e-164 580.5 399 76.7
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 2.2e-163 579.3 371 80.9
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 2.2e-163 579.3 371 80.9
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.9e-163 578.9 379 78.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 2.9e-163 578.9 386 78.8
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 4.9e-163 578.2 374 79.4
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 6.4e-163 577.8 365 81.6
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 8.4e-163 577.4 400 75.5
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.4e-162 575.9 400 75.2
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 5.4e-162 574.7 382 77.2
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 5.4e-162 574.7 357 81.5
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.2e-161 573.5 350 80.3
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.2e-161 573.5 400 75.2
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.1e-161 572.8 380 73.9
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 2.1e-161 572.8 369 77.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 2.1e-161 572.8 362 77.3
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.7e-161 572.4 371 78.4
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 4.6e-161 571.6 337 84.0
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 6.0e-161 571.2 379 77.6
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 7.8e-161 570.9 347 82.1
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.0e-160 570.5 337 84.0
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.0e-160 570.5 357 79.8
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.0e-160 570.5 355 78.9
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.3e-160 569.3 389 75.8
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 3.0e-160 568.9 375 79.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 6.6e-160 567.8 373 76.7
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-159 567.0 370 79.2
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.1e-159 567.0 369 77.5
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.1e-159 567.0 366 79.8
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.9e-159 566.2 343 82.8
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.5e-159 565.8 368 78.5
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 2.5e-159 565.8 360 78.6
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.3e-159 565.1 347 79.8
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 4.3e-159 565.1 348 81.3
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.6e-159 564.7 369 76.2
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.6e-159 563.9 369 79.4
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 9.6e-159 563.9 371 78.7
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-158 563.5 369 79.1
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.2e-158 563.5 370 77.3
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.6e-158 563.1 373 77.2
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.6e-158 562.0 377 77.5
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 4.7e-158 561.6 347 80.4
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 4.7e-158 561.6 386 74.9
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.7e-158 561.6 373 75.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 6.2e-158 561.2 375 78.9
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.4e-157 559.3 382 75.9
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 2.4e-157 559.3 405 73.3
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 2.4e-157 559.3 324 85.5
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 3.1e-157 558.9 347 80.1
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-157 558.9 376 77.7
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 4.0e-157 558.5 366 79.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.0e-157 558.5 371 76.0
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 5.2e-157 558.1 371 75.7
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 5.2e-157 558.1 369 77.8
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 9.0e-157 557.4 375 77.9
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.2e-156 557.0 351 81.8
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-156 557.0 339 80.8
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.6e-156 555.8 367 77.1
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.6e-156 555.8 383 76.2
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.4e-156 555.4 371 77.4
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 4.4e-156 555.1 373 75.1
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 5.8e-156 554.7 365 78.9
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 9.9e-156 553.9 377 76.7
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 9.9e-156 553.9 362 80.1
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.7e-155 553.1 368 79.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.2e-155 552.7 336 83.6
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.9e-155 552.4 382 74.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 2.9e-155 552.4 355 76.3
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 2.9e-155 552.4 374 75.9
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.8e-155 552.0 366 79.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 4.9e-155 551.6 347 82.7
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 4.9e-155 551.6 403 72.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 4.9e-155 551.6 353 80.2
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.4e-155 551.2 387 74.2
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 8.4e-155 550.8 346 78.0
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.4e-154 550.1 393 72.5
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.9e-154 549.7 383 76.8
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.9e-154 549.7 340 79.7
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 2.4e-154 549.3 355 76.3
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 2.4e-154 549.3 394 71.8
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 3.2e-154 548.9 362 79.6
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 3.2e-154 548.9 362 79.6
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 5.4e-154 548.1 395 73.2
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 5.4e-154 548.1 393 74.6
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 5.4e-154 548.1 320 82.2
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 9.3e-154 547.4 339 80.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.7e-153 545.8 370 75.7
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 6.0e-153 544.7 366 78.4
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 6.0e-153 544.7 358 76.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 6.0e-153 544.7 325 81.5
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.0e-152 543.9 362 77.1
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.3e-152 543.5 360 79.4
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.7e-152 543.1 362 77.1
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.6e-152 541.2 342 77.2
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.5e-151 540.0 366 77.9
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.5e-151 540.0 366 77.9
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-151 539.7 376 75.0
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.9e-151 539.7 342 77.2
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 7.3e-151 537.7 343 77.8
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 7.3e-151 537.7 344 77.0
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 2.8e-150 535.8 383 74.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 6.2e-150 534.6 312 82.7
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 8.1e-150 534.3 358 75.4
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 5.3e-149 531.6 367 73.3
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 2.0e-148 529.6 363 74.1
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.8e-148 528.1 403 71.7
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.2e-147 526.2 317 79.2
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 8.4e-147 524.2 361 72.3
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 7.1e-146 521.2 347 75.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 7.1e-146 521.2 323 79.6
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 2.7e-145 519.2 344 74.1
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 4.6e-145 518.5 463 60.9
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 2.4e-141 506.1 392 68.1
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.6e-140 502.7 305 79.3
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 6.0e-137 491.5 323 75.2
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.7e-136 487.6 307 81.1
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.1e-134 483.0 349 70.5
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 3.1e-133 479.2 392 67.3
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 4.0e-133 478.8 294 82.7
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.6e-132 476.1 360 72.8
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 6.5e-131 471.5 279 81.0
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.2e-129 467.2 353 68.8
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 7.9e-129 464.5 306 69.3
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.0e-128 464.2 324 74.7
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.3e-128 463.0 399 64.2
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.1e-125 454.1 306 69.6
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 5.3e-125 451.8 333 64.6
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 5.9e-124 448.4 307 67.8
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.6e-124 448.0 247 87.4
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.4e-122 443.7 379 58.0
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.2e-121 440.7 356 65.4
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.3e-118 430.6 360 63.6
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.7e-118 430.3 303 67.7
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.4e-116 422.5 334 61.4
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 5.7e-111 405.2 364 62.4
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.1e-109 399.4 221 87.8
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 8.8e-104 381.3 385 56.1
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.1e-101 372.9 241 76.3
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 3.3e-95 352.8 299 57.9
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.0e-92 343.6 248 75.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.8e-91 339.3 218 72.5
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.4e-69 267.7 362 49.2
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 4.1e-69 266.2 150 85.3
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 2.5e-58 230.3 171 64.3
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 6.4e-54 215.7 174 65.5
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 3.0e-43 180.3 164 56.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 3.0e-35 153.7 95 81.1
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 9.0e-32 142.1 306 31.0
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.6e-28 131.3 100 65.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.6e-23 114.0 248 36.3
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 3.4e-23 113.6 357 29.4
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 2.2e-22 110.9 297 27.3
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.4e-21 108.2 65 75.4
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 7.9e-20 102.4 67 79.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 7.9e-20 102.4 67 79.1
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.8e-19 101.3 67 79.1
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.3e-18 97.1 377 25.7
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 5.6e-18 96.3 79 64.6
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-15 88.6 59 71.2
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.4e-13 81.6 81 64.2
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.9e-13 81.3 82 64.6
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 6.7e-11 72.8 108 34.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 2.8e-09 67.4 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 3.7e-09 67.0 35 82.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 6.9e-08 62.8 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.2e-07 62.0 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.2e-07 62.0 38 73.7
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 1.7e-06 58.2 50 60.0


User provided reference genes

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