Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 2.4e-207 725.3 385 100.0
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 4.1e-162 575.1 380 82.4
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 1.2e-78 297.7 395 47.8
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 3.4e-68 263.1 388 44.8
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 6.4e-67 258.8 389 45.0
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 3.2e-66 256.5 344 46.5
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 4.2e-66 256.1 396 42.4
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 9.3e-66 255.0 393 43.8
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 4.6e-65 252.7 397 41.3
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 3.0e-64 250.0 391 43.5
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 3.0e-64 250.0 390 43.3
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 3.7e-62 243.0 358 45.3
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 3.1e-61 240.0 386 42.2
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 9.9e-60 235.0 392 43.1
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 1.3e-59 234.6 390 39.7
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 1.7e-59 234.2 396 41.7
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.7e-59 234.2 394 42.4
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 4.9e-59 232.6 388 40.5
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 6.4e-59 232.3 399 41.6
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 9.3e-58 228.4 391 39.4
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 2.1e-57 227.3 406 40.1
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 2.7e-57 226.9 393 42.0
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 4.6e-57 226.1 399 41.6
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 7.9e-57 225.3 407 41.8
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 1.0e-56 224.9 384 40.6
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 1.3e-56 224.6 420 38.1
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 1.3e-56 224.6 389 41.6
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 2.3e-56 223.8 413 41.2
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 5.1e-56 222.6 397 39.5
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 8.7e-56 221.9 412 39.8
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 1.5e-55 221.1 388 39.4
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 1.9e-55 220.7 406 36.9
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.3e-55 219.9 408 41.4
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 7.4e-55 218.8 392 39.0
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 6.2e-54 215.7 387 38.8
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 8.2e-54 215.3 408 37.7
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.1e-53 214.9 405 37.5
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 1.1e-53 214.9 381 40.7
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 2.4e-53 213.8 392 38.8
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 3.1e-53 213.4 250 48.8
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 4.0e-53 213.0 396 40.2
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 4.0e-53 213.0 406 38.4
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 4.0e-53 213.0 377 39.0
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 5.3e-53 212.6 329 43.2
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 9.0e-53 211.8 396 39.9
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.2e-52 211.5 410 37.8
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 1.5e-52 211.1 413 39.0
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 2.6e-52 210.3 248 51.2
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 4.5e-52 209.5 397 36.8
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 4.5e-52 209.5 392 38.5
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 4.5e-52 209.5 349 41.0
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 5.8e-52 209.1 401 39.4
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 5.8e-52 209.1 344 39.5
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 7.6e-52 208.8 410 36.6
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 1.0e-51 208.4 351 39.6
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 8.4e-51 205.3 381 39.9
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 1.4e-50 204.5 358 42.2
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 1.4e-50 204.5 432 35.0
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 1.9e-50 204.1 392 38.0
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 4.2e-50 203.0 391 38.6
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 4.2e-50 203.0 405 36.5
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 9.3e-50 201.8 403 39.7
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 2.1e-49 200.7 217 53.5
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 4.6e-49 199.5 385 38.7
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 6.0e-49 199.1 327 43.4
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 1.0e-48 198.4 357 37.5
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 1.8e-48 197.6 249 48.6
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 3.0e-48 196.8 269 45.4
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 3.9e-48 196.4 421 37.8
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 1.1e-47 194.9 383 36.8
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 1.3e-46 191.4 243 46.9
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 2.8e-46 190.3 274 43.4
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 1.1e-45 188.3 252 46.0
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 1.4e-45 188.0 393 36.4
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 1.2e-44 184.9 383 37.9
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 2.6e-44 183.7 241 44.8
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 3.4e-44 183.3 265 42.6
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 7.6e-44 182.2 315 39.7
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 2.2e-43 180.6 381 37.0
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 6.5e-43 179.1 220 49.1
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 3.2e-42 176.8 379 35.6
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 4.2e-42 176.4 406 36.0
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.5e-42 176.0 429 33.8
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 1.2e-41 174.9 354 39.3
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 1.6e-41 174.5 338 35.5
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 1.6e-41 174.5 256 45.3
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 2.1e-41 174.1 235 45.5
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 4.6e-41 172.9 255 40.0
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 1.8e-40 171.0 356 37.1
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 3.9e-40 169.9 327 36.1
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 4.3e-39 166.4 245 43.7
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 4.3e-39 166.4 249 43.8
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 1.7e-38 164.5 258 42.6
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 2.2e-38 164.1 261 41.0
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 2.8e-38 163.7 220 43.6
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 8.2e-38 162.2 184 53.3
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 1.8e-37 161.0 244 41.8
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 3.1e-37 160.2 389 32.6
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 4.1e-37 159.8 413 34.6
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.6e-36 157.1 388 32.5
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 2.6e-36 157.1 426 33.3
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 7.7e-36 155.6 278 38.5
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 1.7e-35 154.5 301 38.9
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 1.7e-35 154.5 301 38.9
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 1.7e-35 154.5 301 38.9
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 5.0e-35 152.9 249 41.0
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 2.5e-34 150.6 404 33.4
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 3.2e-34 150.2 248 40.7
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 4.2e-34 149.8 248 39.9
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 5.5e-34 149.4 216 44.0
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 1.2e-33 148.3 276 40.6
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 7.9e-33 145.6 338 36.1
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 1.0e-32 145.2 184 50.0
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 6.7e-32 142.5 271 36.5
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 1.7e-30 137.9 252 36.9
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 1.7e-30 137.9 216 39.8
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 9.1e-29 132.1 185 45.9
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 2.0e-28 131.0 192 45.3
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 3.8e-27 126.7 177 45.8
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 4.2e-26 123.2 356 33.7
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 1.6e-25 121.3 260 34.6
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 2.1e-25 120.9 214 37.9
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 1.8e-24 117.9 267 34.1
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 5.2e-24 116.3 215 37.2
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 5.2e-24 116.3 215 36.3
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 6.7e-24 115.9 222 37.4
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 9.7e-23 112.1 134 45.5
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.4e-21 108.2 183 43.2
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 7.0e-21 105.9 199 36.7
VMungo1383G2244 Vigna mungo HOM05D004411 ORTHO05D005569 1.6e-17 94.7 112 48.2
DCAR_011015 Daucus carota HOM05D004411 ORTHO05D005569 6.1e-17 92.8 193 37.3
EL10Ac9g22233 Beta vulgaris HOM05D004411 ORTHO05D005569 1.8e-16 91.3 247 30.4
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 5.2e-16 89.7 319 27.9
Cc09_g02490 Coffea canephora HOM05D004411 ORTHO05D005569 4.8e-14 83.2 92 55.4
Hma1.2p1_3713F.1_g337350 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 1.1e-13 82.0 77 53.2
Cc00_g16970 Coffea canephora HOM05D004411 ORTHO05D005569 1.2e-12 78.6 95 52.6
Oeu034511.1 Olea europaea HOM05D004411 ORTHO05D005569 2.0e-12 77.8 76 55.3
Glyma.09G101500 Glycine max HOM05D004411 ORTHO05D005569 4.5e-12 76.6 77 51.9
A05p19860 Brassica napus HOM05D004411 ORTHO05D005569 3.6e-09 67.0 114 37.7
BraA05t20891Z Brassica rapa HOM05D004411 ORTHO05D005569 3.6e-09 67.0 114 37.7
SMO367G0149 Selaginella moellendorffii HOM05D004411 ORTHO05D005569 1.0e-08 65.5 194 29.4
Mapoly0160s0028 Marchantia polymorpha HOM05D004411 ORTHO05D005569 2.3e-08 64.3 204 27.5
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 4.4e-07 60.1 86 44.2
Haze_07158 Corylus avellana HOM05D004411 ORTHO05D005569 1.3e-06 58.5 66 42.4
PGSC0003DMG400013925 Solanum tuberosum HOM05D004411 ORTHO05D005569 1.7e-06 58.2 49 57.1
Lalb_Chr15g0080381 Lupinus albus HOM05D004411 ORTHO05D005569 6.3e-06 56.2 90 34.4


User provided reference genes

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