Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 5.2e-148 527.7 268 100.0
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.7e-143 512.7 268 98.1
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.1e-100 370.5 265 70.6
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 2.6e-99 365.9 245 71.8
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.9e-97 359.8 264 68.9
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 4.2e-97 358.6 259 67.2
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 7.8e-96 354.4 252 67.1
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 2.5e-94 349.4 262 64.1
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.3e-94 349.0 259 68.0
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 3.3e-94 349.0 258 68.2
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 7.3e-94 347.8 264 67.0
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 9.6e-94 347.4 256 67.6
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.2e-93 347.1 260 67.7
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.1e-93 346.3 251 68.9
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.8e-93 345.9 256 67.2
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 4.7e-93 345.1 254 67.7
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.4e-92 343.6 254 67.7
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.4e-92 343.6 233 71.2
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.4e-92 343.6 287 63.1
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.2e-91 340.5 259 65.6
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.2e-91 340.5 258 65.5
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 9.9e-91 337.4 287 60.3
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.3e-90 337.0 262 62.6
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.2e-90 336.3 242 68.6
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.8e-90 335.5 256 66.4
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 8.4e-90 334.3 268 61.2
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.1e-89 334.0 252 65.5
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.1e-89 334.0 262 62.2
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.9e-89 333.2 265 63.4
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 7.1e-89 331.3 261 65.1
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 1.2e-88 330.5 262 62.2
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.6e-88 330.1 263 62.7
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 2.1e-88 329.7 264 64.0
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 3.5e-88 328.9 262 64.5
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 4.6e-88 328.6 238 68.1
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 6.0e-88 328.2 256 63.3
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 1.0e-87 327.4 265 62.6
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.3e-87 327.0 245 65.7
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 2.3e-87 326.2 261 63.2
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 3.0e-87 325.9 262 63.4
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 3.9e-87 325.5 251 64.9
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 5.1e-87 325.1 264 64.4
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.6e-87 324.7 251 64.9
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.5e-86 323.6 256 61.7
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.9e-86 323.2 256 65.2
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.9e-86 323.2 240 66.2
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 1.3e-85 320.5 261 60.9
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 4.8e-85 318.5 263 60.8
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 4.8e-85 318.5 246 61.4
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 6.2e-85 318.2 272 58.8
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.1e-84 317.4 237 64.6
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 1.4e-84 317.0 270 61.1
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 5.3e-84 315.1 246 63.0
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.9e-84 314.7 274 59.9
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.0e-83 313.2 264 63.3
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 2.6e-83 312.8 265 60.4
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 3.4e-83 312.4 265 60.4
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 3.4e-83 312.4 271 59.4
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.5e-83 312.0 255 62.4
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 5.8e-83 311.6 256 62.1
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 7.6e-83 311.2 264 62.5
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 7.6e-83 311.2 253 61.7
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 7.6e-83 311.2 242 62.8
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 9.9e-83 310.8 241 62.7
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 9.9e-83 310.8 241 62.7
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.7e-82 310.1 260 60.0
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 2.2e-82 309.7 241 63.1
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.8e-82 308.9 269 60.6
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 3.8e-82 308.9 265 59.6
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.9e-82 308.5 261 62.5
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 6.4e-82 308.1 241 61.8
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 6.4e-82 308.1 248 62.9
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 8.4e-82 307.8 246 61.0
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 8.4e-82 307.8 265 58.5
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.4e-81 307.0 245 61.6
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.9e-81 306.6 239 61.9
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.9e-81 306.6 243 59.7
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.2e-81 305.8 261 61.7
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 5.4e-81 305.1 261 61.7
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 7.1e-81 304.7 258 57.8
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 9.3e-81 304.3 247 61.5
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 1.2e-80 303.9 240 62.5
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 2.1e-80 303.1 250 60.8
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 7.9e-80 301.2 238 61.3
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.0e-79 300.8 240 59.6
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.0e-79 300.8 248 60.9
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.8e-79 300.1 246 59.3
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.9e-79 298.9 238 61.3
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.1e-78 297.4 238 60.9
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.5e-78 296.2 265 56.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 4.3e-78 295.4 243 59.3
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 7.4e-78 294.7 264 60.6
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 6.2e-77 291.6 259 57.5
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 5.8e-75 285.0 287 53.7
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.1e-72 276.6 222 62.6
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 6.0e-72 275.0 277 51.3
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.1e-69 266.5 259 54.1
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.9e-65 253.4 274 47.8
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 5.5e-65 251.9 218 57.8
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 4.6e-64 248.8 205 59.0
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 6.0e-64 248.4 241 53.5
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 1.8e-63 246.9 175 70.3
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 3.9e-63 245.7 264 51.1
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 6.7e-63 245.0 231 55.4
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.5e-62 243.0 218 57.3
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.5e-62 243.0 171 66.7
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.1e-60 237.7 176 67.0
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.8e-60 236.9 230 51.7
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.2e-59 234.2 196 60.7
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 5.9e-59 231.9 171 65.5
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 6.5e-58 228.4 220 50.5
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.3e-53 214.2 152 69.1
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 2.2e-53 213.4 171 60.2
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 1.4e-49 200.7 208 47.6
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.2e-48 197.6 235 45.1
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 2.1e-40 170.2 119 68.1
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 3.6e-40 169.5 153 56.2
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 8.0e-40 168.3 170 49.4
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.0e-38 163.7 135 60.7
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.2e-37 160.2 133 61.7
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 3.1e-36 156.4 109 66.1
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.3e-36 155.6 133 60.2
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 5.3e-36 155.6 157 55.4
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.9e-25 120.6 147 44.9
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 9.4e-25 118.2 156 42.3
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 2.1e-24 117.1 91 64.8
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.0e-23 114.8 92 59.8
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.4e-23 114.4 104 54.8
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.2e-22 111.3 88 67.0
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.2e-22 111.3 88 67.0
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.1e-20 103.2 80 63.8
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 6.6e-18 95.5 73 60.3
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 4.2e-17 92.8 84 58.3
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.5e-14 84.3 67 58.2
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 1.7e-13 80.9 237 28.3
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.4e-06 56.6 82 43.9
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.4e-06 56.6 82 43.9
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.4e-06 56.6 82 41.5


User provided reference genes

Program Settings