Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 1.8e-268 928.7 471 100.0
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 2.8e-197 692.2 445 80.7
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 5.8e-171 604.7 469 67.8
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 2.2e-165 586.3 470 64.0
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 1.5e-163 580.1 470 63.2
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 3.6e-160 568.9 467 63.0
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 3.6e-160 568.9 470 61.9
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 9.7e-158 560.8 466 60.7
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.4e-156 557.0 466 60.3
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.8e-156 556.6 454 61.9
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 4.5e-155 552.0 464 59.9
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 1.7e-154 550.1 474 60.1
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 2.9e-154 549.3 471 60.3
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 1.5e-150 537.0 455 60.7
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 3.3e-150 535.8 466 58.4
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 7.4e-150 534.6 467 58.5
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 1.7e-149 533.5 461 59.4
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 1.7e-149 533.5 471 57.7
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 9.1e-148 527.7 467 57.4
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 3.4e-147 525.8 474 58.0
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 3.4e-147 525.8 468 57.1
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 5.9e-147 525.0 455 60.2
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 6.5e-146 521.5 468 56.6
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 3.2e-145 519.2 456 57.5
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 7.2e-145 518.1 470 58.1
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 7.2e-145 518.1 468 56.8
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 9.4e-145 517.7 468 57.1
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 2.1e-144 516.5 503 55.3
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 6.1e-144 515.0 473 57.1
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 6.1e-144 515.0 471 54.8
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 6.1e-144 515.0 463 57.0
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 8.0e-144 514.6 462 56.3
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 1.0e-143 514.2 517 52.4
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 1.4e-143 513.8 471 56.1
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 1.4e-143 513.8 459 56.2
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 2.3e-143 513.1 464 57.5
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 3.9e-143 512.3 471 55.8
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 3.9e-143 512.3 463 55.9
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 2.0e-142 510.0 469 57.1
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 2.6e-142 509.6 470 55.7
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 9.7e-142 507.7 469 56.9
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 9.7e-142 507.7 469 56.9
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.4e-140 503.8 457 58.2
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 2.4e-140 503.1 470 55.5
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 4.1e-140 502.3 451 58.1
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 5.3e-140 501.9 463 55.7
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 5.3e-140 501.9 464 54.5
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 1.6e-139 500.4 459 56.4
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 1.6e-139 500.4 452 57.5
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 2.6e-139 499.6 460 55.0
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 2.2e-138 496.5 460 54.8
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 3.8e-138 495.7 468 54.5
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 8.5e-138 494.6 468 55.1
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-137 494.2 459 55.8
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 7.2e-137 491.5 459 55.8
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 1.2e-136 490.7 468 55.3
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 1.6e-136 490.3 468 56.0
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 8.0e-136 488.0 468 55.3
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 1.4e-135 487.3 465 53.1
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 1.4e-135 487.3 470 53.2
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 2.3e-135 486.5 470 52.6
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 5.2e-135 485.3 470 52.3
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 6.7e-135 485.0 464 53.4
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 6.7e-135 485.0 463 53.1
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 6.7e-135 485.0 463 53.6
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 6.7e-135 485.0 471 54.8
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 8.8e-135 484.6 463 52.9
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 2.0e-134 483.4 470 53.0
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 2.6e-134 483.0 464 53.2
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 4.4e-134 482.3 468 51.3
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 9.7e-134 481.1 465 52.3
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 9.7e-134 481.1 468 53.0
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 2.2e-133 479.9 466 52.6
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 2.2e-133 479.9 465 52.9
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 2.2e-133 479.9 460 53.3
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 2.8e-133 479.6 463 52.5
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 1.4e-132 477.2 464 52.8
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 1.8e-132 476.9 463 52.3
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 1.8e-132 476.9 470 53.2
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 7.0e-132 474.9 470 52.8
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 7.7e-131 471.5 458 53.3
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 2.2e-130 469.9 458 53.3
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 1.5e-129 467.2 455 55.8
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 5.5e-129 465.3 460 52.6
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 3.6e-128 462.6 427 56.4
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 3.6e-128 462.6 465 52.0
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 8.0e-128 461.5 469 50.1
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 6.8e-127 458.4 439 54.7
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 2.0e-126 456.8 472 51.1
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 4.4e-126 455.7 441 54.0
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 7.5e-126 454.9 470 51.1
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 2.8e-125 453.0 455 50.8
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 1.1e-124 451.1 469 51.2
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 9.1e-124 448.0 469 52.2
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 2.7e-123 446.4 472 51.1
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 3.5e-123 446.0 472 51.5
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 2.5e-121 439.9 433 54.0
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 8.0e-120 434.9 471 49.7
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 5.7e-118 428.7 466 48.9
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 9.8e-118 427.9 494 46.2
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 5.4e-116 422.2 498 45.2
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 3.8e-114 416.0 297 70.0
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 1.9e-113 413.7 430 50.5
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 6.6e-106 388.7 453 46.4
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 2.5e-105 386.7 420 51.7
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 4.3e-97 359.4 422 45.0
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 9.9e-94 348.2 445 42.2
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 1.1e-87 328.2 491 39.5
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 4.7e-80 302.8 404 42.3
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 8.1e-80 302.0 373 43.7
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 9.9e-78 295.0 289 52.2
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 7.8e-75 285.4 525 35.2
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 8.1e-72 275.4 470 35.1
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 1.3e-66 258.1 483 33.7
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 2.5e-65 253.8 526 31.7
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.5e-62 244.6 194 63.4
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 1.3e-58 231.5 327 44.0
Aqoxy4G01950 Aquilegia oxysepala HOM05D002435 ORTHO05D002550 1.1e-55 221.9 219 61.2
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 3.5e-51 206.8 357 33.9
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 1.4e-44 184.9 162 57.4
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 5.5e-44 183.0 162 56.8
Actinidia25279 Actinidia chinensis HOM05D005294 ORTHO05D006720 4.1e-39 166.8 371 33.4
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 1.5e-33 148.3 117 60.7
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 1.5e-30 138.3 388 26.8
MCO15G657 Micromonas commoda HOM05D005294 ORTHO05D006720 4.5e-30 136.7 356 27.0
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 5.9e-30 136.3 125 56.8
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 5.9e-30 136.3 125 56.8
Aa31LG3G12670 Aethionema arabicum HOM05D004235 ORTHO05D005157 3.8e-29 133.7 236 34.3
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 8.5e-29 132.5 122 56.6
Aqoxy4G01951 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 7.2e-28 129.4 73 86.3
Cre03.g186500 Chlamydomonas reinhardtii HOM05D005294 ORTHO05D006720 2.1e-27 127.9 350 27.7
CARHR271620 Cardamine hirsuta HOM05D005294 ORTHO05D006720 2.0e-25 121.3 105 53.3
RcHm_v2.0_Chr2g0093931 Rosa chinensis HOM05D005294 ORTHO05D006720 3.7e-24 117.1 128 46.9
SMO281G0026 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 1.1e-20 105.5 124 46.0
SMO244G0078 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 2.7e-14 84.3 176 33.5
Zm00001eb382850 Zea mays HOM05D005294 ORTHO05D006720 4.2e-12 77.0 88 47.7
Zm00001eb383990 Zea mays HOM05D005294 ORTHO05D006720 7.2e-12 76.3 88 47.7
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 2.6e-09 67.8 73 47.9
Cc06_g10970 Coffea canephora HOM05D005294 ORTHO05D038989 7.0e-07 59.7 40 72.5
GSVIVG01038419001 Vitis vinifera HOM05D005294 ORTHO05D008307 2.0e-06 58.2 38 65.8
GSVIVG01027373001 Vitis vinifera HOM05D005294 ORTHO05D006720 4.5e-06 57.0 39 61.5


User provided reference genes

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