Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 4.6e-135 485.0 321 100.0
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 2.1e-95 353.2 319 75.5
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 7.9e-95 351.3 322 68.3
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 1.0e-94 350.9 320 69.4
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 1.8e-94 350.1 314 74.2
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 3.9e-94 349.0 318 69.8
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 3.3e-93 345.9 318 71.1
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 4.8e-92 342.0 321 75.1
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 4.8e-92 342.0 318 74.8
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 1.4e-91 340.5 321 75.1
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 1.8e-91 340.1 318 73.3
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 2.4e-91 339.7 303 78.9
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 4.1e-91 339.0 326 73.9
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 5.3e-91 338.6 319 74.6
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 7.0e-91 338.2 321 74.8
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 7.0e-91 338.2 318 74.2
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 1.5e-90 337.0 321 74.8
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 2.0e-90 336.7 319 74.6
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 4.5e-90 335.5 316 75.9
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 4.5e-90 335.5 319 74.3
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 4.5e-90 335.5 317 70.7
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 5.9e-90 335.1 319 72.7
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 8.5e-89 331.3 321 74.1
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 8.5e-89 331.3 321 74.1
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 1.2e-87 327.4 326 72.1
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 2.7e-87 326.2 312 73.4
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 2.3e-86 323.2 318 69.5
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 8.8e-86 321.2 320 66.2
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 7.4e-85 318.2 317 66.6
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 9.7e-85 317.8 319 72.7
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 1.3e-84 317.4 319 72.1
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.7e-84 317.0 314 73.9
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 2.2e-84 316.6 317 73.8
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 1.4e-83 313.9 318 70.1
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 9.1e-83 311.2 319 71.8
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 1.2e-82 310.8 319 63.9
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 1.6e-82 310.5 320 71.6
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 2.0e-82 310.1 318 69.8
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 4.5e-82 308.9 319 71.2
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 1.3e-81 307.4 317 71.0
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 2.2e-81 306.6 320 71.9
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 2.2e-81 306.6 318 63.8
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 2.2e-81 306.6 320 70.6
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 2.9e-81 306.2 315 65.4
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 2.9e-81 306.2 315 65.4
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.8e-81 305.8 318 72.0
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.8e-81 305.8 318 72.0
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 5.0e-81 305.4 311 65.9
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 6.5e-81 305.1 319 63.9
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.5e-81 304.7 320 71.2
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.1e-80 304.3 320 71.6
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 7.2e-80 301.6 318 63.2
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 9.4e-80 301.2 321 70.1
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.2e-79 300.8 317 70.7
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 1.6e-79 300.4 320 64.1
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 1.6e-79 300.4 320 64.1
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.6e-79 300.4 302 74.5
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 2.7e-79 299.7 291 74.9
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 3.6e-79 299.3 315 71.1
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 8.0e-79 298.1 318 64.8
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 1.0e-78 297.7 319 64.9
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.0e-78 297.7 292 76.0
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 1.0e-78 297.7 318 70.4
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 1.0e-78 297.7 320 65.3
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 1.0e-78 297.7 311 71.7
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.8e-78 297.0 317 70.0
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 4.0e-78 295.8 321 68.5
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 4.0e-78 295.8 321 68.5
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 1.5e-77 293.9 295 73.2
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 2.0e-77 293.5 317 69.7
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 2.0e-77 293.5 319 69.0
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 2.6e-77 293.1 320 69.4
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 3.4e-77 292.7 319 68.7
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 5.7e-77 292.0 317 68.1
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 5.7e-77 292.0 320 68.4
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 9.7e-77 291.2 327 64.5
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 1.3e-76 290.8 319 69.0
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 2.2e-76 290.0 318 62.6
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 3.7e-76 289.3 317 67.5
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 6.3e-76 288.5 316 69.9
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 6.3e-76 288.5 318 69.2
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 6.3e-76 288.5 314 62.7
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 8.3e-76 288.1 327 65.1
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.4e-75 287.3 317 65.0
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 2.4e-75 286.6 317 66.2
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 3.1e-75 286.2 346 51.4
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 3.1e-75 286.2 320 66.2
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 3.1e-75 286.2 314 62.7
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 9.1e-75 284.6 319 60.8
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 1.0e-73 281.2 318 67.3
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 1.3e-73 280.8 326 65.3
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 5.0e-73 278.9 237 71.7
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 1.9e-72 276.9 319 67.1
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 2.5e-72 276.6 319 66.1
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 3.2e-72 276.2 318 61.9
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 4.2e-72 275.8 318 66.4
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 1.6e-71 273.9 344 55.5
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 1.4e-70 270.8 305 68.5
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 1.8e-70 270.4 295 72.2
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 1.8e-70 270.4 310 66.8
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 5.2e-70 268.9 297 64.0
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 5.2e-70 268.9 318 60.1
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 2.0e-69 266.9 317 62.5
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.3e-68 264.2 320 60.3
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 4.8e-68 262.3 296 70.6
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 6.3e-68 261.9 231 65.8
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 8.3e-68 261.5 312 64.4
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 1.4e-67 260.8 293 70.6
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 3.1e-67 259.6 318 60.4
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 1.6e-66 257.3 290 69.3
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 1.7e-65 253.8 321 63.9
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 6.6e-65 251.9 299 67.2
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 8.6e-65 251.5 233 61.8
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 1.4e-62 244.2 315 62.2
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 2.3e-62 243.4 294 64.3
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 8.9e-62 241.5 296 67.6
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 2.0e-58 230.3 177 65.0
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 3.5e-58 229.6 314 57.0
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 1.3e-57 227.6 177 63.3
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 3.9e-57 226.1 216 58.8
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 4.7e-55 219.2 156 73.1
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 4.7e-55 219.2 319 56.1
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 2.6e-53 213.4 184 68.5
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 2.9e-52 209.9 308 51.0
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 3.7e-52 209.5 216 63.4
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 7.0e-51 205.3 184 70.7
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 2.7e-50 203.4 204 64.2
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 2.7e-50 203.4 204 64.7
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 3.0e-49 199.9 130 80.0
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 3.9e-49 199.5 306 51.3
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 6.6e-49 198.7 152 65.8
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 1.1e-48 198.0 310 56.1
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 4.3e-48 196.1 216 58.3
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 2.1e-47 193.7 177 57.6
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 1.1e-46 191.4 151 73.5
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 1.5e-45 187.6 153 64.1
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 3.4e-45 186.4 308 46.8
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 1.3e-44 184.5 183 66.1
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 1.5e-40 171.0 212 73.6
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 9.5e-40 168.3 155 56.8
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 4.7e-39 166.0 157 59.2
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 4.4e-37 159.5 313 50.5
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 5.4e-35 152.5 195 46.7
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 3.5e-34 149.8 156 55.1
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 4.6e-34 149.4 195 47.7
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 2.1e-31 140.6 207 63.3
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 8.9e-30 135.2 158 52.5
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 4.4e-29 132.9 161 49.7
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 1.3e-28 131.3 150 52.7
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 5.4e-27 125.9 183 65.0
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.4e-19 100.5 84 59.5
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.3e-19 98.6 84 58.3
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.3e-19 98.6 84 58.3
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 1.1e-16 91.7 144 41.7
MBI04_g44954_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.1e-16 91.7 164 49.4
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.5e-16 90.5 77 58.4
COL.COLO4_34775 Corchorus olitorius HOM05D004175 ORTHO05D004664 9.6e-16 88.6 96 52.1
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.6e-15 87.8 77 57.1
C03p68800 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-14 84.3 58 63.8
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 2.6e-13 80.5 67 61.2
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 5.8e-13 79.3 77 55.8
BolC9t58072H Brassica oleracea HOM05D004175 ORTHO05D004664 9.9e-13 78.6 96 46.9
C09p52070 Brassica napus HOM05D004175 ORTHO05D004664 3.2e-11 73.6 46 73.9
BolC4t22068H Brassica oleracea HOM05D004175 ORTHO05D004664 4.6e-10 69.7 42 71.4
HPP92_002875 Vanilla planifolia HOM05D004175 ORTHO05D004664 1.9e-08 64.3 84 44.0
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 9.6e-08 62.0 48 58.3
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.3e-07 61.6 98 40.8
FAN19G2726 Fragaria x ananassa HOM05D004175 ORTHO05D004664 6.9e-06 55.8 62 48.4


User provided reference genes

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