Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 7.7e-74 280.4 143 100.0
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.5e-69 266.2 143 97.2
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 7.3e-24 114.4 143 50.3
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.2e-23 113.6 143 47.6
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 7.5e-21 104.4 112 52.7
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 1.1e-19 100.5 116 52.6
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.9e-19 99.8 113 49.6
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 3.2e-19 99.0 117 46.2
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 5.4e-19 98.2 118 44.9
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 7.0e-19 97.8 116 44.8
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 2.7e-18 95.9 131 46.6
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 2.7e-18 95.9 107 45.8
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 3.0e-17 92.4 117 44.4
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 5.0e-17 91.7 144 37.5
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 6.6e-17 91.3 89 48.3
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 1.9e-16 89.7 115 41.7
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 5.6e-16 88.2 113 44.2
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 5.6e-16 88.2 113 44.2
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 5.6e-16 88.2 109 46.8
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 7.3e-16 87.8 109 45.0
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 9.5e-16 87.4 108 44.4
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.6e-15 86.7 127 38.6
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 2.1e-15 86.3 107 49.5
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 4.7e-15 85.1 107 44.9
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 6.2e-15 84.7 106 43.4
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 8.1e-15 84.3 96 49.0
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.4e-14 83.6 132 37.1
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 1.8e-14 83.2 65 55.4
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 1.8e-14 83.2 103 45.6
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 2.3e-14 82.8 111 41.4
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 2.3e-14 82.8 147 38.8
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 3.1e-14 82.4 114 38.6
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 3.1e-14 82.4 107 42.1
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 3.1e-14 82.4 99 42.4
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 4.0e-14 82.0 131 42.0
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 6.8e-14 81.3 117 40.2
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 8.9e-14 80.9 131 42.0
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 8.9e-14 80.9 112 42.0
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.5e-13 80.1 110 42.7
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 1.5e-13 80.1 101 44.6
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 1.5e-13 80.1 129 40.3
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 2.0e-13 79.7 109 45.0
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.4e-13 78.6 143 37.8
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 4.4e-13 78.6 112 38.4
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 9.9e-13 77.4 107 42.1
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 1.3e-12 77.0 121 41.3
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 1.3e-12 77.0 113 38.1
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.7e-12 76.6 143 37.8
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.2e-12 76.3 110 40.9
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.2e-12 76.3 110 40.9
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 2.9e-12 75.9 121 38.0
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 2.9e-12 75.9 85 43.5
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 4.9e-12 75.1 111 39.6
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 4.9e-12 75.1 93 44.1
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 1.1e-11 73.9 103 42.7
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 1.4e-11 73.6 111 41.4
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 1.4e-11 73.6 70 50.0
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 1.9e-11 73.2 131 36.6
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 1.9e-11 73.2 129 39.5
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 2.4e-11 72.8 99 41.4
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 3.2e-11 72.4 77 45.5
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 5.4e-11 71.6 104 42.3
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 9.2e-11 70.9 100 39.0
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 1.2e-10 70.5 117 39.3
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 1.2e-10 70.5 104 42.3
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 2.1e-10 69.7 107 43.0
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 2.7e-10 69.3 116 41.4
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 2.7e-10 69.3 115 35.7
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 2.7e-10 69.3 118 38.1
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 3.5e-10 68.9 113 39.8
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 3.5e-10 68.9 110 40.0
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 3.5e-10 68.9 107 38.3
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 4.6e-10 68.6 66 48.5
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 6.0e-10 68.2 129 39.5
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 1.0e-09 67.4 66 47.0
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 1.7e-09 66.6 110 40.0
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 3.9e-09 65.5 99 39.4
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 6.6e-09 64.7 76 48.7
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 6.6e-09 64.7 109 39.4
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 8.6e-09 64.3 113 39.8
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 1.1e-08 63.9 110 41.8
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 1.5e-08 63.5 109 40.4
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 1.5e-08 63.5 109 40.4
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 1.5e-08 63.5 129 34.9
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 1.5e-08 63.5 98 38.8
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 2.5e-08 62.8 114 36.0
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 3.3e-08 62.4 106 37.7
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 3.3e-08 62.4 106 37.7
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 3.3e-08 62.4 102 38.2
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 4.3e-08 62.0 114 35.1
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 4.3e-08 62.0 73 43.8
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 5.6e-08 61.6 67 49.3
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 5.6e-08 61.6 67 49.3
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 7.3e-08 61.2 109 40.4
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 7.3e-08 61.2 118 38.1
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 1.6e-07 60.1 105 37.1
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 2.1e-07 59.7 105 37.1
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 2.8e-07 59.3 109 39.4
Os01g0938400 Oryza sativa ssp. japonica HOM05D024678 ORTHO05D025976 2.8e-07 59.3 59 50.8
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 3.6e-07 58.9 67 46.3
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 3.6e-07 58.9 103 39.8
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 6.2e-07 58.2 131 32.8
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 8.1e-07 57.8 67 46.3
Actinidia33329 Actinidia chinensis HOM05D007296 ORTHO05D009201 1.1e-06 57.4 92 39.1
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 2.4e-06 56.2 40 57.5


User provided reference genes

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