Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 2.3e-76 288.9 150 100.0
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 3.4e-24 115.5 89 64.0
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 1.1e-17 94.0 126 43.7
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 6.9e-17 91.3 96 52.1
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.5e-16 90.1 138 42.8
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 1.0e-15 87.4 105 46.7
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.3e-15 87.0 94 51.1
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 2.9e-15 85.9 74 58.1
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 3.8e-15 85.5 96 49.0
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 3.8e-15 85.5 81 54.3
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 3.8e-15 85.5 95 49.5
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 1.4e-14 83.6 66 60.6
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.4e-14 83.6 92 50.0
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 2.5e-14 82.8 75 57.3
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 2.5e-14 82.8 70 58.6
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 3.2e-14 82.4 94 47.9
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 3.2e-14 82.4 96 45.8
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 4.2e-14 82.0 69 56.5
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 1.2e-13 80.5 93 47.3
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.2e-13 80.5 105 45.7
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 2.1e-13 79.7 93 48.4
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 4.6e-13 78.6 95 48.4
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 7.9e-13 77.8 95 49.5
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 1.4e-12 77.0 72 54.2
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 1.4e-12 77.0 66 59.1
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.4e-12 77.0 76 53.9
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 2.3e-12 76.3 99 43.4
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 3.0e-12 75.9 76 52.6
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 3.0e-12 75.9 80 47.5
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 3.9e-12 75.5 130 38.5
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 3.9e-12 75.5 51 68.6
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 6.7e-12 74.7 130 39.2
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 8.8e-12 74.3 143 36.4
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 8.8e-12 74.3 130 39.2
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 1.1e-11 73.9 49 71.4
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.1e-11 73.9 72 51.4
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.5e-11 73.6 48 70.8
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.5e-11 73.6 76 50.0
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 1.9e-11 73.2 80 48.8
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 2.5e-11 72.8 80 48.8
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 9.7e-11 70.9 127 37.0
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 1.3e-10 70.5 76 50.0
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.3e-10 70.5 76 50.0
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 1.3e-10 70.5 93 43.0
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 1.3e-10 70.5 52 63.5
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 2.2e-10 69.7 76 50.0
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.2e-10 69.7 71 47.9
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.2e-10 69.7 71 47.9
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 2.2e-10 69.7 75 44.0
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.8e-10 69.3 59 52.5
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 3.7e-10 68.9 63 57.1
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 3.7e-10 68.9 63 57.1
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 4.8e-10 68.6 127 37.8
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 6.3e-10 68.2 94 44.7
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.1e-09 67.4 50 58.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 1.4e-09 67.0 90 37.8
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 1.8e-09 66.6 46 67.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 2.4e-09 66.2 66 50.0
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 5.3e-09 65.1 64 51.6
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 5.3e-09 65.1 66 53.0
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.2e-08 63.9 92 42.4
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 1.5e-08 63.5 47 59.6
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 1.5e-08 63.5 42 61.9
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 2.6e-08 62.8 92 39.1
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 3.4e-08 62.4 85 40.0
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 7.7e-08 61.2 74 44.6
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 1.0e-07 60.8 56 48.2
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 2.9e-07 59.3 60 48.3
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 1.4e-06 57.0 56 46.4
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 3.2e-06 55.8 43 55.8
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 5.5e-06 55.1 42 57.1
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 7.2e-06 54.7 43 51.2
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 9.4e-06 54.3 46 56.5


User provided reference genes

Program Settings