Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 1.5e-161 572.8 279 100.0
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 7.1e-116 421.0 278 70.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.1e-111 407.1 278 68.0
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.5e-110 403.3 279 68.1
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.3e-109 400.2 284 69.7
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.2e-109 399.4 284 68.3
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 2.9e-109 399.1 283 68.6
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 1.6e-107 393.3 281 68.3
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.3e-106 390.2 261 69.3
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.3e-106 389.4 279 65.6
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 3.9e-106 388.7 283 66.4
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.5e-105 386.7 287 66.6
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 7.4e-105 384.4 265 67.2
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 7.4e-105 384.4 261 67.4
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 1.6e-104 383.3 261 67.0
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 2.1e-104 382.9 261 65.5
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 4.8e-104 381.7 284 65.5
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 3.1e-103 379.0 281 65.1
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 6.9e-103 377.9 293 62.5
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 6.9e-103 377.9 246 69.1
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.2e-102 377.1 274 63.9
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 1.2e-102 377.1 247 72.1
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 4.5e-102 375.2 280 66.8
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 5.8e-102 374.8 281 64.8
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 5.8e-102 374.8 282 64.2
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 3.8e-101 372.1 282 65.2
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 4.9e-101 371.7 281 63.3
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 1.1e-100 370.5 303 62.4
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.4e-100 370.2 285 64.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 4.2e-100 368.6 277 64.6
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.5e-100 368.2 290 62.1
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 5.5e-100 368.2 277 63.5
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 9.3e-100 367.5 282 64.5
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.2e-99 367.1 263 64.6
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 2.7e-99 365.9 248 68.1
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.7e-99 365.9 284 61.3
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 3.5e-99 365.5 275 62.9
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.5e-99 365.5 277 63.2
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 3.5e-99 365.5 281 61.9
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 3.5e-99 365.5 283 65.0
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 6.0e-99 364.8 276 64.5
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 7.9e-99 364.4 247 69.2
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 7.9e-99 364.4 284 63.4
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.3e-98 363.6 277 62.5
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 2.3e-98 362.8 282 61.0
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 2.3e-98 362.8 280 63.6
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 3.0e-98 362.5 284 62.0
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 3.0e-98 362.5 269 64.7
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.1e-97 360.5 275 65.1
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.1e-97 360.5 267 64.0
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.5e-97 360.1 273 65.9
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.9e-97 359.8 283 60.4
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.9e-97 359.8 263 65.4
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 1.9e-97 359.8 287 64.5
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 3.3e-97 359.0 282 61.7
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.3e-97 359.0 203 74.9
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 4.3e-97 358.6 207 73.4
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 5.6e-97 358.2 277 62.8
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.6e-97 358.2 269 63.2
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 7.4e-97 357.8 281 61.9
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 7.4e-97 357.8 279 63.4
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.6e-96 356.7 270 63.7
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.6e-96 356.7 281 61.9
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.6e-96 356.7 279 63.1
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 3.7e-96 355.5 245 66.9
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 4.8e-96 355.1 275 62.9
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.2e-96 354.8 246 66.7
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 8.1e-96 354.4 279 61.6
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.1e-95 354.0 261 65.1
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.1e-95 354.0 245 67.3
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.4e-95 353.6 264 64.8
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.4e-95 352.8 283 60.8
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 5.3e-95 351.7 278 60.1
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 6.9e-95 351.3 278 60.8
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 2.6e-94 349.4 207 74.4
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 3.4e-94 349.0 273 61.5
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 5.8e-94 348.2 277 63.2
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 1.9e-92 343.2 279 60.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 3.2e-92 342.4 272 62.1
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 7.1e-92 341.3 279 58.8
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 7.1e-92 341.3 279 58.8
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 9.3e-92 340.9 277 59.2
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 9.3e-92 340.9 279 59.9
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 9.3e-92 340.9 279 59.5
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.6e-91 340.1 268 58.6
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.7e-91 339.3 278 57.2
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 3.5e-91 339.0 279 59.5
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 6.0e-91 338.2 279 59.5
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 7.9e-91 337.8 279 58.1
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.8e-90 336.7 278 57.9
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 5.1e-90 335.1 279 57.3
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.1e-89 334.0 279 58.1
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.9e-89 333.2 268 57.8
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.9e-89 333.2 225 66.7
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 3.3e-89 332.4 206 70.9
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 4.3e-89 332.0 278 58.3
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 7.4e-89 331.3 196 73.0
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.8e-87 326.6 246 62.6
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 2.2e-85 319.7 241 59.8
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 5.0e-85 318.5 206 68.4
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 4.2e-84 315.5 215 65.6
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 7.2e-84 314.7 268 58.2
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 2.5e-81 306.2 279 54.5
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.6e-80 303.5 263 57.0
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 7.7e-78 294.7 212 60.4
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 2.6e-73 279.6 209 66.0
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.6e-73 279.6 210 59.0
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.4e-71 273.9 255 52.2
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.5e-70 270.4 224 55.8
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 5.5e-68 261.9 205 54.6
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 6.7e-66 255.0 205 60.0
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 7.4e-65 251.5 208 52.4
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 1.3e-64 250.8 208 61.1
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.6e-59 232.6 146 71.2
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 8.8e-58 228.0 240 50.4
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.3e-56 224.2 219 50.7
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.1e-52 211.1 170 54.1
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.0e-42 177.9 276 38.0
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 6.8e-42 175.3 167 53.3
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 4.5e-38 162.5 172 48.8
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 2.6e-33 146.7 150 52.7
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 2.8e-27 126.7 149 49.7
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.4e-23 114.4 70 71.4
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.6e-14 84.3 55 67.3
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 9.2e-07 58.5 37 67.6


User provided reference genes

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