Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 8.1e-163 577.0 294 100.0
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 7.3e-71 271.6 254 59.1
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 2.9e-67 259.6 292 53.8
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 2.1e-65 253.4 306 51.3
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 2.1e-65 253.4 306 51.3
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 2.7e-65 253.1 272 52.6
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 3.0e-64 249.6 299 49.5
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 3.0e-64 249.6 270 53.3
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 6.6e-64 248.4 277 53.1
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 6.6e-64 248.4 262 52.7
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 1.5e-63 247.3 262 52.7
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 2.8e-62 243.0 280 48.9
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 4.8e-62 242.3 286 49.0
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 4.8e-62 242.3 280 49.6
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.1e-61 241.1 280 49.6
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 5.3e-61 238.8 292 48.3
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 5.3e-61 238.8 278 50.0
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 6.9e-61 238.4 293 48.1
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 9.0e-61 238.0 262 52.3
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 3.8e-59 232.6 268 50.0
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 6.4e-59 231.9 273 48.4
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 3.2e-58 229.6 291 48.5
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 1.6e-57 227.3 288 46.5
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 7.9e-57 224.9 265 49.1
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 1.0e-56 224.6 284 48.6
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 1.0e-56 224.6 264 49.6
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 1.8e-56 223.8 269 46.1
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 8.7e-56 221.5 287 47.0
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 1.9e-55 220.3 295 46.8
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 1.9e-55 220.3 271 48.3
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 4.3e-55 219.2 263 47.9
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 4.3e-55 219.2 295 47.1
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 7.4e-55 218.4 263 47.9
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 7.4e-55 218.4 223 54.3
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 1.6e-54 217.2 260 50.0
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 1.6e-54 217.2 223 52.5
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 2.4e-53 213.4 289 45.0
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 3.4e-52 209.5 244 49.2
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 5.8e-52 208.8 244 49.2
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 1.7e-51 207.2 240 48.8
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 2.2e-51 206.8 221 50.2
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 2.9e-51 206.5 240 47.9
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 2.9e-51 206.5 240 47.9
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 3.8e-51 206.1 266 45.9
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 4.9e-51 205.7 240 47.5
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 1.1e-50 204.5 264 45.1
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 1.4e-50 204.1 222 50.9
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 3.2e-50 203.0 240 47.1
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 9.3e-50 201.4 260 45.8
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 1.2e-49 201.1 224 49.6
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 1.6e-49 200.7 211 51.2
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 7.9e-49 198.4 282 42.6
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 1.3e-48 197.6 286 43.4
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 1.8e-48 197.2 257 47.1
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 2.3e-48 196.8 221 48.9
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 2.3e-48 196.8 278 43.5
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 2.5e-47 193.4 216 50.9
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 7.4e-47 191.8 272 46.0
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 3.1e-45 186.4 242 47.1
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 6.9e-45 185.3 217 50.7
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 9.0e-45 184.9 253 45.5
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 2.0e-44 183.7 286 41.6
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 1.0e-43 181.4 240 44.6
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 1.3e-43 181.0 281 41.3
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 2.9e-43 179.9 262 39.7
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 7.1e-42 175.3 172 55.2
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 1.9e-39 167.2 177 52.0
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 1.2e-36 157.9 243 44.0
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 1.5e-36 157.5 175 49.7
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 2.1e-33 147.1 118 63.6
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 7.4e-31 138.7 234 37.2
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 1.4e-24 117.9 213 38.5
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 8.2e-22 108.6 248 30.2
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 6.5e-19 99.0 236 29.7
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 4.7e-17 92.8 99 47.5
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 4.4e-15 86.3 212 34.9
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 9.7e-15 85.1 99 45.5
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 1.5e-10 71.2 85 44.7
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 9.4e-10 68.6 221 26.2
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 1.2e-09 68.2 221 26.2
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 1.2e-09 68.2 221 26.2
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 2.1e-09 67.4 221 26.2
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 4.7e-09 66.2 206 26.2
Ciclev10022056m.g Citrus clementina HOM05D000828 ORTHO05D000623 1.5e-07 61.2 204 27.9
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 2.6e-07 60.5 221 25.3
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 2.6e-07 60.5 221 25.3
COL.COLO4_12110 Corchorus olitorius HOM05D001914 ORTHO05D000623 3.3e-07 60.1 238 26.9
AUR62006900 Chenopodium quinoa HOM05D000828 ORTHO05D000623 5.7e-07 59.3 181 27.6
Ah.06g188610 Amaranthus hybridus HOM05D000828 ORTHO05D000623 7.5e-07 58.9 206 32.0
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 9.7e-07 58.5 62 46.8
Migut.N03276 Erythranthe guttata HOM05D000828 ORTHO05D000623 1.3e-06 58.2 209 30.1
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 2.2e-06 57.4 60 46.7
AUR62000548 Chenopodium quinoa HOM05D000828 ORTHO05D000623 4.8e-06 56.2 199 29.6
FAN19G0657 Fragaria x ananassa HOM05D000828 ORTHO05D000623 6.3e-06 55.8 208 27.4
EL10Ac4g09670 Beta vulgaris HOM05D000828 ORTHO05D000623 8.2e-06 55.5 209 29.2


User provided reference genes

Program Settings