Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 0.0e+00 2102.0 1089 100.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 0.0e+00 1175.2 1094 59.0
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 8.2e-293 1010.7 1093 52.4
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 2.5e-281 972.6 1097 49.2
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 3.6e-280 968.8 1180 49.1
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 3.2e-273 945.7 1094 48.9
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 4.7e-272 941.8 1094 48.8
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 2.2e-266 922.9 1154 46.8
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 5.0e-266 921.8 1092 48.1
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.8e-260 903.3 1089 47.6
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 5.0e-258 895.2 1096 47.4
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 1.6e-256 890.2 1094 47.3
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 8.3e-253 877.9 1101 46.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.2e-251 874.0 1097 48.4
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 4.5e-251 872.1 1103 46.6
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 7.7e-251 871.3 1102 46.7
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.5e-249 865.1 1103 46.6
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.2e-248 864.0 1099 46.4
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 6.1e-248 861.7 1104 45.7
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.0e-248 861.3 1058 46.6
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 1.4e-247 860.5 1093 47.0
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 1.2e-246 857.4 1096 45.3
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 3.7e-245 852.4 1098 45.4
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 1.4e-244 850.5 1112 46.5
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 2.4e-244 849.7 1097 44.7
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 5.4e-244 848.6 1106 46.3
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 7.0e-244 848.2 1007 48.4
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.5e-243 845.9 1104 45.9
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 5.9e-243 845.1 1100 45.2
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 6.8e-239 831.6 1114 44.4
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 2.0e-238 830.1 1097 44.4
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 2.6e-238 829.7 1099 45.2
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.2e-235 820.8 888 52.6
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 7.3e-233 811.6 1101 45.0
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.1e-231 807.7 1097 43.5
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 5.2e-231 805.4 1090 43.4
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 4.4e-230 802.4 1091 43.5
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 5.8e-230 802.0 1092 42.9
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.1e-228 797.7 1094 43.7
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 8.6e-226 788.1 1092 43.2
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 1.5e-225 787.3 1122 41.6
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 1.9e-225 786.9 1090 42.8
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 9.5e-225 784.6 1092 42.7
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 7.5e-222 775.0 1074 43.9
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 9.9e-222 774.6 1106 43.3
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 2.4e-220 770.0 1092 42.1
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 7.1e-220 768.5 1093 41.9
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 4.4e-214 749.2 814 51.4
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 1.2e-211 741.1 1047 42.3
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 1.6e-211 740.7 1048 43.8
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 3.6e-208 729.6 1090 41.3
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 6.9e-207 725.3 1134 40.1
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.4e-204 717.6 1084 40.9
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 7.8e-203 711.8 1089 40.8
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 9.9e-198 694.9 1108 39.9
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 7.1e-196 688.7 1098 39.0
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.2e-195 688.0 1093 39.6
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 2.9e-189 666.8 1047 39.4
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 1.8e-183 647.5 1088 39.6
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 6.9e-183 645.6 757 47.2
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 1.3e-178 631.3 846 44.6
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.1e-172 611.7 797 46.0
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.1e-170 602.8 721 46.7
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 8.2e-168 595.5 1239 33.8
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.4e-164 584.7 903 41.2
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 3.0e-162 577.0 817 40.6
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 5.3e-159 566.2 1046 35.6
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 1.3e-157 561.6 1067 37.9
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 2.2e-157 560.8 977 36.9
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 1.2e-155 555.1 643 45.9
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 4.8e-144 516.5 1093 35.6
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 3.0e-138 497.3 772 41.1
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 1.8e-135 488.0 1094 34.3
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 5.7e-129 466.5 1110 31.1
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 7.8e-102 376.3 879 30.9
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 6.9e-90 336.7 352 53.4
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 2.2e-80 305.1 222 68.9
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.3e-77 295.8 278 56.5
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 7.1e-71 273.5 234 60.3
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 4.6e-70 270.8 329 50.2
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 6.3e-67 260.4 204 62.3
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 3.5e-62 244.6 233 58.8
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 5.1e-61 240.7 1119 24.4
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 6.7e-61 240.4 278 48.9
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 2.4e-58 231.9 266 52.6
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 9.0e-58 229.9 219 56.2
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 3.4e-57 228.0 433 34.6
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.3e-48 199.5 443 32.7
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.6e-46 192.6 369 32.2
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 3.3e-44 184.9 435 31.7
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 8.5e-40 170.2 992 22.3
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 7.0e-34 150.6 133 60.2
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 2.0e-28 132.5 92 69.6
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.8e-27 128.6 157 46.5
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.1e-26 124.8 798 22.8
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 7.7e-25 120.6 171 41.5
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 5.0e-24 117.9 85 67.1
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 1.2e-20 106.7 79 65.8
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 1.2e-20 106.7 79 65.8
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 1.7e-16 92.8 73 63.0


User provided reference genes

Program Settings