Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 0.0e+00 1623.2 851 100.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.4e-286 988.4 863 65.5
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 7.6e-270 934.1 824 63.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.4e-268 929.9 824 62.6
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 9.0e-263 910.6 850 60.1
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 8.4e-261 904.0 825 60.6
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 2.5e-257 892.5 865 58.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.7e-256 888.6 878 58.2
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.3e-253 880.2 839 58.8
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 2.8e-248 862.4 862 57.9
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 3.7e-248 862.1 855 57.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 8.2e-248 860.9 866 57.4
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.9e-246 854.7 855 57.1
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 9.4e-244 847.4 869 57.1
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 4.6e-243 845.1 865 56.8
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.4e-242 843.6 854 56.0
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.8e-242 843.2 867 57.1
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.8e-242 840.9 860 56.4
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 8.8e-242 840.9 853 56.7
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.0e-241 839.7 867 56.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 3.3e-241 839.0 878 56.0
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 4.8e-240 835.1 839 57.2
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 9.1e-239 830.9 867 56.4
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 7.7e-238 827.8 990 50.7
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.0e-237 825.1 871 54.8
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 5.0e-237 825.1 863 55.3
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.9e-236 823.2 868 54.5
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.5e-236 822.8 867 56.1
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 4.2e-236 822.0 866 56.7
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.4e-234 817.0 868 54.1
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.3e-234 816.2 863 54.2
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 6.7e-234 814.7 866 53.7
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.7e-234 814.7 826 56.5
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.5e-233 813.5 866 53.7
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.6e-233 812.8 851 53.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 4.4e-233 812.0 869 54.0
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.7e-233 811.6 865 53.8
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.8e-232 809.3 852 53.9
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 4.8e-232 808.5 866 53.5
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 8.2e-232 807.7 867 53.7
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.2e-232 807.7 857 54.1
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.1e-231 807.4 864 53.9
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.8e-231 806.6 851 53.2
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.5e-230 803.5 868 53.3
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-228 797.3 860 54.3
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-228 797.3 876 54.3
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 6.1e-227 791.6 840 55.0
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.1e-225 787.3 860 52.9
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 4.4e-225 785.4 904 51.4
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 4.4e-225 785.4 831 53.9
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.8e-224 782.7 824 54.5
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 6.3e-224 781.6 673 65.7
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 8.2e-224 781.2 866 52.9
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.2e-224 781.2 831 54.2
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 8.2e-224 781.2 857 53.3
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.1e-223 780.8 982 49.8
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 5.3e-223 778.5 852 53.1
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 7.0e-223 778.1 852 52.9
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 7.0e-223 778.1 852 52.0
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 5.9e-222 775.0 850 52.0
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.9e-221 772.7 852 53.1
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 2.9e-221 772.7 868 52.8
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 6.5e-221 771.5 869 53.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 1.1e-220 770.8 843 53.5
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 1.2e-219 767.3 856 53.5
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 2.1e-219 766.5 717 59.6
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.7e-219 766.1 872 52.9
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.4e-218 763.8 872 52.3
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 8.8e-218 761.1 861 52.6
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 7.5e-217 758.1 867 51.0
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.7e-216 755.7 843 52.8
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 4.8e-216 755.4 843 52.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 1.8e-215 753.4 846 52.0
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 1.8e-215 753.4 860 52.1
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.1e-215 752.7 823 52.9
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.6e-214 750.4 862 51.0
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 2.9e-213 746.1 838 52.5
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.5e-212 743.8 900 49.4
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.6e-211 740.3 596 68.0
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 2.1e-211 740.0 793 54.5
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.8e-210 736.9 645 63.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 3.0e-210 736.1 845 52.1
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.4e-207 726.5 867 49.3
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.5e-206 722.6 1002 45.9
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.5e-206 722.2 863 49.2
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 2.3e-205 719.9 865 49.8
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 3.8e-205 719.2 869 50.5
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.5e-204 717.2 843 51.2
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.9e-202 708.0 858 51.0
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 4.4e-201 705.7 825 50.9
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 8.3e-200 701.4 872 49.4
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 4.1e-199 699.1 844 49.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 7.0e-199 698.4 876 49.0
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.3e-197 693.3 850 49.5
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 2.5e-196 689.9 844 49.8
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 5.6e-196 688.7 832 50.4
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.8e-195 686.4 934 46.0
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 6.8e-194 681.8 705 54.8
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 1.4e-191 674.1 892 47.2
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 1.2e-190 671.0 843 48.3
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.9e-188 663.7 856 47.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 9.5e-188 661.4 846 47.2
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.1e-186 657.9 843 47.8
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 3.1e-186 656.4 818 48.2
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 8.9e-186 654.8 844 47.0
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 1.5e-185 654.1 654 56.6
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 5.8e-185 652.1 817 48.1
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 8.3e-184 648.3 907 45.6
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 5.4e-183 645.6 842 48.2
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 9.2e-183 644.8 843 46.3
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.7e-182 643.3 860 46.7
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.7e-181 640.6 869 46.5
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 7.3e-180 635.2 826 46.6
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.6e-179 634.0 846 46.5
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.1e-179 633.6 854 46.0
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 3.6e-179 632.9 851 47.4
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.8e-178 628.6 651 54.4
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.8e-178 628.6 649 54.4
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 8.9e-178 628.2 715 51.6
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 4.4e-177 625.9 840 46.0
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 8.3e-176 621.7 867 45.2
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 3.2e-175 619.8 846 46.2
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 3.0e-173 613.2 850 45.6
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.5e-172 610.1 660 54.5
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.1e-170 604.7 826 46.6
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 2.2e-168 597.0 846 45.9
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 4.9e-168 595.9 827 46.7
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 1.2e-166 591.3 830 44.0
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.0e-165 588.2 837 43.7
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 6.6e-165 585.5 645 52.9
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.9e-164 583.9 644 52.8
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 3.6e-163 579.7 834 45.2
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 3.1e-162 576.6 830 43.3
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 4.2e-159 566.2 895 42.0
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.4e-154 551.2 637 50.7
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 3.7e-147 526.6 897 40.8
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.3e-144 518.1 586 50.3
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.5e-137 494.6 856 39.5
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.5e-135 487.3 829 39.1
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 3.2e-135 486.9 817 41.5
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 2.9e-128 463.8 814 38.7
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 8.5e-128 462.2 558 49.5
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 2.5e-127 460.7 559 49.4
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.4e-117 428.3 767 41.3
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 4.5e-113 413.3 664 43.7
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 4.2e-111 406.8 784 37.1
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.2e-93 346.7 439 47.8
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 2.0e-92 344.7 466 44.8
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.3e-85 321.2 454 49.3
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.0e-76 291.6 813 33.0
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 3.4e-76 290.8 730 32.3
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 4.3e-55 220.7 356 41.9
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.6e-55 220.3 337 44.2
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.1e-53 214.5 122 84.4
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.0e-52 211.8 194 60.3
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 6.6e-48 196.8 312 41.3
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 2.3e-40 171.8 262 41.6
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.5e-39 168.3 298 36.6
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.1e-38 165.2 234 42.7
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 6.2e-38 163.7 159 53.5
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 6.2e-38 163.7 191 47.1
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 4.0e-37 161.0 262 39.3
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 4.9e-35 154.1 175 52.6
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 4.2e-34 151.0 201 44.3
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.3e-32 146.0 147 57.8
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.9e-27 128.3 143 55.2
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 3.2e-26 124.8 116 60.3
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 7.4e-23 113.6 120 48.3
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 5.3e-21 107.5 116 50.9
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.4e-19 100.1 100 54.0
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 7.2e-18 97.1 100 53.0
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.5e-17 94.7 155 40.6
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.7e-16 90.5 117 47.0
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.3e-15 88.2 73 57.5
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 9.7e-15 86.7 107 46.7
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.3e-14 84.0 162 38.3
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 6.3e-14 84.0 153 37.9
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.2e-12 79.7 114 45.6
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.5e-12 77.8 144 42.4
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 3.2e-10 71.6 52 65.4
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-08 65.5 73 45.2
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 2.3e-08 65.5 64 56.2
MBI13_g36809_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D240810 6.7e-08 63.9 41 65.9
Cre08.g376200 Chlamydomonas reinhardtii HOM05D003622 ORTHO05D004453 4.3e-07 61.2 179 27.9


User provided reference genes

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