Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03625 Aquilegia oxysepala HOM05D000555 ORTHO05D001906 1.8e-75 285.8 139 100.0
Aqoxy6G00208 Aquilegia oxysepala HOM05D000555 ORTHO05D001906 1.6e-28 129.8 75 90.7
Prupe.1G499400 Prunus persica HOM05D000555 ORTHO05D001906 1.1e-13 80.5 74 55.4
TAR381G0759 Trochodendron aralioides HOM05D000555 ORTHO05D001906 1.9e-13 79.7 74 60.8
MBI09_g12164_MAGBIO Magnolia biondii HOM05D000555 ORTHO05D001906 2.5e-13 79.3 74 60.8
Nn5g28268 Nelumbo nucifera HOM05D000555 ORTHO05D001906 9.6e-13 77.4 74 58.1
MD15G1350300 Malus domestica HOM05D000555 ORTHO05D001906 1.6e-12 76.6 74 52.7
Haze_00451 Corylus avellana HOM05D000555 ORTHO05D001906 6.2e-12 74.7 74 54.1
PSO170G2163 Papaver somniferum HOM05D000555 ORTHO05D001906 8.1e-12 74.3 74 54.1
CiPaw.05G222400 Carya illinoinensis HOM05D000555 ORTHO05D001906 1.1e-11 73.9 74 54.1
RcHm_v2.0_Chr6g0295681 Rosa chinensis HOM05D000555 ORTHO05D001906 1.1e-11 73.9 74 54.1
Gohir.D01G180700 Gossypium hirsutum HOM05D000555 ORTHO05D001906 1.8e-11 73.2 74 56.8
Gorai.002G221900 Gossypium raimondii HOM05D000555 ORTHO05D001906 1.8e-11 73.2 74 56.8
Thecc.08G124600 Theobroma cacao HOM05D000555 ORTHO05D001906 1.8e-11 73.2 74 59.5
Dinv27321 Davidia involucrata HOM05D000555 ORTHO05D001906 2.4e-11 72.8 74 54.1
QL09p034959 Quercus lobata HOM05D000555 ORTHO05D001906 3.1e-11 72.4 74 52.7
PSO528G0268 Papaver somniferum HOM05D000555 ORTHO05D001906 4.0e-11 72.0 74 52.7
GSVIVG01008876001 Vitis vinifera HOM05D000555 ORTHO05D001906 4.0e-11 72.0 74 56.8
Cfa016012 Carpinus fangiana HOM05D000555 ORTHO05D001906 5.3e-11 71.6 73 52.1
Duzib093G1130 Durio zibethinus HOM05D000555 ORTHO05D001906 5.3e-11 71.6 74 54.1
Gohir.A01G188800 Gossypium hirsutum HOM05D000555 ORTHO05D001906 5.3e-11 71.6 74 55.4
TWI56G0829 Tripterygium wilfordii HOM05D000555 ORTHO05D001906 5.3e-11 71.6 74 52.7
ATR0584G256 Amborella trichopoda HOM05D000555 ORTHO05D001906 6.9e-11 71.2 73 50.7
FAN15G2287 Fragaria x ananassa HOM05D000555 ORTHO05D001906 6.9e-11 71.2 74 51.4
FAN20G1220 Fragaria x ananassa HOM05D000555 ORTHO05D001906 6.9e-11 71.2 74 51.4
FAN27G2775 Fragaria x ananassa HOM05D000555 ORTHO05D001906 6.9e-11 71.2 74 51.4
Potri.002G084300 Populus trichocarpa HOM05D000555 ORTHO05D001906 9.0e-11 70.9 70 57.1
FAN24G2587 Fragaria x ananassa HOM05D000555 ORTHO05D001906 1.2e-10 70.5 74 51.4
Duzib116G0370 Durio zibethinus HOM05D000555 ORTHO05D001906 1.5e-10 70.1 73 54.8
Manes.18G076700 Manihot esculenta HOM05D000555 ORTHO05D001906 1.5e-10 70.1 74 54.1
FvH4_2g26820 Fragaria vesca HOM05D000555 ORTHO05D001906 4.4e-10 68.6 74 50.0
Sabra02G0065900 Salix brachista HOM05D000555 ORTHO05D001906 9.9e-10 67.4 66 57.6
Atru.chr13.1457 Acer truncatum HOM05D000555 ORTHO05D001906 1.3e-09 67.0 87 44.8
Atru.chr13.1480 Acer truncatum HOM05D000555 ORTHO05D001906 1.3e-09 67.0 87 44.8
COL.COLO4_35931 Corchorus olitorius HOM05D000555 ORTHO05D001906 2.9e-09 65.9 74 54.1
Zm00001eb146530 Zea mays HOM05D000555 ORTHO05D001906 3.8e-09 65.5 72 52.8
PGR042G0600 Punica granatum HOM05D000555 ORTHO05D001906 4.9e-09 65.1 74 51.4
CsaV3_4G028210 Cucumis sativus L. HOM05D000555 ORTHO05D001906 1.1e-08 63.9 72 48.6
Mapoly0004s0286 Marchantia polymorpha HOM05D000555 ORTHO05D001906 1.9e-08 63.2 73 49.3
Nitab4.5_0004882g0040 Nicotiana tabacum HOM05D000555 ORTHO05D001906 1.9e-08 63.2 74 48.6
Cpa.g.sc36.61 Carica papaya HOM05D000555 ORTHO05D001906 3.2e-08 62.4 74 51.4
Sed0006597 Sechium edule HOM05D000555 ORTHO05D001906 7.1e-08 61.2 72 47.2
MELO3C010481.2 Cucumis melo HOM05D000555 ORTHO05D001906 2.1e-07 59.7 72 45.8
CSS0047814 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 2.7e-07 59.3 74 48.6
Eucgr.F03787 Eucalyptus grandis HOM05D000555 ORTHO05D001906 2.7e-07 59.3 73 47.9
Lj1g0015636 Lotus japonicus HOM05D000555 ORTHO05D001906 2.7e-07 59.3 73 47.9
Solyc06g060380.3 Solanum lycopersicum HOM05D000555 ORTHO05D001906 2.7e-07 59.3 74 47.3
Sopen06g020520 Solanum pennellii HOM05D000555 ORTHO05D001906 2.7e-07 59.3 74 47.3
AagrBONN_evm.TU.Sc2ySwM_344.2222 Anthoceros agrestis HOM05D000555 ORTHO05D001906 3.5e-07 58.9 69 44.9
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 3.5e-07 58.9 72 44.4
Nitab4.5_0000633g0190 Nicotiana tabacum HOM05D000555 ORTHO05D001906 3.5e-07 58.9 74 45.9
Pp3c23_10270 Physcomitrium patens HOM05D000555 ORTHO05D001906 4.6e-07 58.5 72 43.1
CAN.G1396.9 Capsicum annuum HOM05D000555 ORTHO05D001906 1.0e-06 57.4 74 47.3
Lalb_Chr20g0119541 Lupinus albus HOM05D000555 ORTHO05D001906 1.3e-06 57.0 72 48.6
CANSAT11G2461 Cannabis sativa HOM05D000555 ORTHO05D001906 1.7e-06 56.6 72 48.6
MELO3C025570.2 Cucumis melo HOM05D000555 ORTHO05D001906 1.7e-06 56.6 72 45.8
CsaV3_1G015470 Cucumis sativus L. HOM05D000555 ORTHO05D001906 1.7e-06 56.6 72 45.8
SEGI_14130 Sequoiadendron giganteum HOM05D000555 ORTHO05D001906 1.7e-06 56.6 72 45.8
Rhsim06G0104100 Rhododendron simsii HOM05D000555 ORTHO05D001906 2.3e-06 56.2 74 48.6
Ah.09g233870 Amaranthus hybridus HOM05D000555 ORTHO05D001906 3.0e-06 55.8 69 44.9
THA.LOC104806739 Tarenaya hassleriana HOM05D000555 ORTHO05D001906 3.0e-06 55.8 72 44.4
arahy.Tifrunner.gnm1.ann1.AVE6NE Arachis hypogaea HOM05D000555 ORTHO05D001906 3.9e-06 55.5 72 47.2
arahy.Tifrunner.gnm1.ann1.M87LIL Arachis hypogaea HOM05D000555 ORTHO05D001906 3.9e-06 55.5 72 47.2
CSS0020180 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 3.9e-06 55.5 72 45.8
Cc10_g11730 Coffea canephora HOM05D000555 ORTHO05D001906 3.9e-06 55.5 74 40.5
Glyma.17G005500 Glycine max HOM05D000555 ORTHO05D001906 3.9e-06 55.5 72 48.6
Lalb_Chr15g0088251 Lupinus albus HOM05D000555 ORTHO05D001906 5.1e-06 55.1 72 45.8
unitig_21.g20239 Utricularia gibba HOM05D000555 ORTHO05D001906 6.6e-06 54.7 72 43.1
Cc09_g00310 Coffea canephora HOM05D000555 ORTHO05D001906 8.7e-06 54.3 95 36.8
Glyma.07G268200 Glycine max HOM05D000555 ORTHO05D001906 8.7e-06 54.3 72 47.2
Oeu017294.2 Olea europaea HOM05D000555 ORTHO05D001906 8.7e-06 54.3 72 45.8


User provided reference genes

Program Settings