Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.3e-168 596.3 292 100.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 4.2e-151 538.1 290 89.3
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 87.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 3.3e-148 528.5 290 86.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.1e-147 525.8 292 84.9
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.1e-147 525.8 292 84.9
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.8e-147 525.4 292 85.3
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.2e-147 524.2 292 84.9
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.4e-146 522.3 290 86.2
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 84.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 84.9
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 9.0e-146 520.4 290 85.2
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.6e-145 518.8 292 84.9
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.4e-145 518.5 290 86.2
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 83.9
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 5.8e-145 517.7 292 84.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 7.6e-145 517.3 292 84.2
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 84.2
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 84.6
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 84.2
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 84.6
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 83.6
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 4.9e-144 514.6 290 83.8
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 83.6
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 83.9
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.9e-143 512.7 292 84.2
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.9e-143 512.7 292 82.5
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 3.2e-143 511.9 290 84.5
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 4.2e-143 511.5 280 85.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 9.3e-143 510.4 291 84.5
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 2.1e-142 509.2 292 81.8
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 3.5e-142 508.4 288 83.0
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 4.6e-142 508.1 289 84.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 1.0e-141 506.9 292 82.9
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 1.0e-141 506.9 292 82.9
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 1.8e-141 506.1 288 82.6
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.8e-141 506.1 292 82.9
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.8e-141 506.1 292 81.5
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 2.3e-141 505.8 290 83.1
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 2.3e-141 505.8 292 82.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 2.3e-141 505.8 292 82.2
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 2.3e-141 505.8 294 82.7
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 5.1e-141 504.6 290 81.7
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 82.5
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 82.5
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 8.7e-141 503.8 292 82.5
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 82.5
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 82.2
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.9e-140 502.7 290 81.4
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 4.3e-140 501.5 290 82.8
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 5.6e-140 501.1 288 81.9
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.3e-139 500.0 321 76.3
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.6e-139 499.6 290 82.8
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 2.1e-139 499.2 292 80.5
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 80.8
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.1e-138 496.9 290 81.7
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.4e-138 496.5 288 80.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.4e-138 496.5 290 80.3
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 81.2
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 81.2
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 1.8e-138 496.1 289 81.3
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 81.8
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.1e-138 495.4 289 82.0
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 4.0e-138 495.0 292 80.5
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 6.9e-138 494.2 287 82.9
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 9.0e-138 493.8 290 81.7
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.2e-137 493.4 287 81.5
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.2e-137 493.4 292 79.5
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.5e-137 493.0 287 81.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 2.0e-137 492.7 288 79.5
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 2.6e-137 492.3 292 81.8
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 79.5
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 80.8
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 4.5e-137 491.5 290 80.0
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 5.8e-137 491.1 291 78.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 7.6e-137 490.7 292 79.1
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.0e-136 490.3 288 79.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.7e-136 489.6 290 79.7
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.2e-136 489.2 290 79.0
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.2e-136 489.2 292 81.2
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.2e-136 489.2 288 79.2
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 3.8e-136 488.4 292 78.8
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 3.8e-136 488.4 290 78.6
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 3.8e-136 488.4 290 78.6
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 4.9e-136 488.0 290 80.0
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 8.4e-136 487.3 292 78.1
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.4e-135 486.5 288 78.5
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.9e-135 486.1 292 77.7
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.9e-135 486.1 292 77.7
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 3.5e-134 481.9 271 84.1
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 3.9e-133 478.4 290 76.6
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 3.9e-133 478.4 290 76.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 5.1e-133 478.0 288 77.1
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 5.1e-133 478.0 288 77.1
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.5e-132 476.5 291 80.1
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.9e-132 476.1 287 77.0
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 5.7e-132 474.6 289 77.2
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 2.8e-131 472.2 271 84.1
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 4.8e-131 471.5 292 78.1
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.1e-130 470.3 270 83.7
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.1e-130 468.8 273 81.7
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 4.1e-130 468.4 288 78.1
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 3.4e-129 465.3 294 74.5
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.0e-128 463.8 273 81.3
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.7e-128 463.0 292 76.7
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.9e-127 459.5 289 75.1
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 3.2e-127 458.8 255 83.1
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 7.9e-126 454.1 271 83.0
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 3.9e-125 451.8 313 72.2
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 2.5e-124 449.1 292 75.7
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 3.8e-120 435.3 310 69.0
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 6.5e-120 434.5 286 71.3
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 9.4e-119 430.6 285 71.6
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 5.7e-116 421.4 281 69.8
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.5e-113 413.3 266 73.3
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.6e-113 412.5 272 71.7
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 1.9e-103 379.8 281 63.0
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.5e-103 378.3 223 81.6
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 4.7e-94 348.6 323 58.5
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.1e-90 337.4 184 88.6
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.4e-84 315.8 194 79.4
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 7.5e-84 314.7 184 82.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 6.3e-83 311.6 297 55.6
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 7.0e-82 308.1 296 54.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 9.2e-82 307.8 289 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 1.0e-77 294.3 188 75.0
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.3e-77 293.1 173 80.9
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 3.6e-70 269.2 293 46.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.8e-61 238.4 310 46.1
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 5.2e-53 212.2 164 64.6
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.6e-52 209.9 224 52.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-50 204.1 221 52.0
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 1.8e-45 187.2 106 81.1
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-42 177.9 101 84.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.9e-42 177.2 102 82.4
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-39 167.9 97 82.5
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 2.0e-28 130.6 76 85.5
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.7e-22 109.8 166 39.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.0e-21 106.3 97 60.8
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 7.2e-10 68.9 51 64.7
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 3.9e-08 63.2 40 82.5


User provided reference genes

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