Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 3.3e-74 281.6 138 100.0
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.6e-15 86.7 153 44.4
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.7e-15 85.9 142 43.0
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.6e-15 85.1 118 44.9
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 2.3e-14 82.8 129 45.0
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.3e-14 82.8 140 43.6
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.3e-14 82.8 118 45.8
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 3.0e-14 82.4 147 44.9
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 3.0e-14 82.4 147 44.9
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.5e-13 79.3 118 46.6
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.5e-13 79.3 118 46.6
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 3.1e-11 72.4 135 39.3
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 3.1e-11 72.4 140 40.0
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 6.8e-11 71.2 132 37.9
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 1.2e-10 70.5 146 39.0
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.4e-10 68.9 145 41.4
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 4.4e-10 68.6 172 35.5
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.8e-10 68.2 148 39.2
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 5.8e-10 68.2 135 37.0
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 9.8e-10 67.4 147 36.1
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 1.3e-09 67.0 142 35.2
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.7e-09 66.6 123 42.3
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 2.2e-09 66.2 155 37.4
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.2e-09 66.2 120 37.5
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 4.9e-09 65.1 141 38.3
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 4.9e-09 65.1 115 43.5
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 6.4e-09 64.7 145 37.2
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 8.3e-09 64.3 114 44.7
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 1.1e-08 63.9 138 39.9
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 1.1e-08 63.9 132 39.4
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.4e-08 63.5 120 41.7
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 1.9e-08 63.2 143 36.4
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 1.9e-08 63.2 153 38.6
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.9e-08 63.2 110 43.6
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 1.9e-08 63.2 129 36.4
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 2.4e-08 62.8 119 38.7
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 3.2e-08 62.4 124 38.7
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 4.1e-08 62.0 132 35.6
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 5.4e-08 61.6 95 45.3
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 5.4e-08 61.6 123 34.1
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 7.1e-08 61.2 140 38.6
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 7.1e-08 61.2 140 38.6
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 9.2e-08 60.8 144 36.1
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 9.2e-08 60.8 119 41.2
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.2e-07 60.5 119 39.5
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 1.2e-07 60.5 120 42.5
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 1.6e-07 60.1 93 41.9
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.6e-07 60.1 128 37.5
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 2.7e-07 59.3 141 36.9
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 3.5e-07 58.9 129 35.7
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 4.6e-07 58.5 134 38.1
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 4.6e-07 58.5 134 38.1
Atru.chr7.265 Acer truncatum HOM05D003969 ORTHO05D003125 7.8e-07 57.8 51 58.8
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 7.8e-07 57.8 78 47.4
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 7.8e-07 57.8 127 40.9
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 7.8e-07 57.8 127 40.9
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 7.8e-07 57.8 146 33.6
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 7.8e-07 57.8 112 34.8
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 7.8e-07 57.8 168 36.9
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.0e-06 57.4 145 37.9
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.3e-06 57.0 153 35.3
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 1.3e-06 57.0 132 34.8
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 1.7e-06 56.6 149 35.6
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.7e-06 56.6 126 37.3
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.3e-06 56.2 88 44.3
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.3e-06 56.2 127 40.2
CDE02G0310 Ceratophyllum demersum HOM05D003969 ORTHO05D003125 3.0e-06 55.8 79 41.8
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 3.0e-06 55.8 142 33.8
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 3.9e-06 55.5 76 48.7
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 3.9e-06 55.5 119 34.5
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 3.9e-06 55.5 114 35.1
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 3.9e-06 55.5 118 37.3
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.9e-06 55.5 135 33.3
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.9e-06 55.5 134 32.8
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 3.9e-06 55.5 119 35.3
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 3.9e-06 55.5 87 47.1
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.1e-06 55.1 118 33.9
PGR142G4289 Punica granatum HOM05D003969 ORTHO05D003125 5.1e-06 55.1 54 57.4
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 5.1e-06 55.1 138 35.5
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.1e-06 55.1 134 35.1
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 6.6e-06 54.7 83 47.0
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.6e-06 54.7 83 43.4
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 6.6e-06 54.7 161 32.3
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 6.6e-06 54.7 88 50.0
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 8.6e-06 54.3 141 34.8
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 8.6e-06 54.3 69 46.4
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 8.6e-06 54.3 113 36.3
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 8.6e-06 54.3 135 35.6


User provided reference genes

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